RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 GAD2Q05329 585 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 EMC10Q5UCC4 262 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 UNC93AQ86WB7 457 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 SFTPA1Q8IWL2 248 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 FAM186BQ8IYM0 893 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 CRYBG2Q8N1P7 616 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 KIAA1958Q8N8K9 716 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 TXNDC5Q8NBS9 432 aaKnown RBP20.56■□□□□ 0.88
ITGA4-202ENST00000339307 ZDHHC4Q9NPG8 344 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 TLR8Q9NR97 1041 aaKnown RBP20.56■□□□□ 0.88
ITGA4-202ENST00000339307 COMMD8Q9NX08 183 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 BCCIPQ9P287 314 aaKnown RBP eCLIP20.56■□□□□ 0.88
ITGA4-202ENST00000339307 MMP17Q9ULZ9 603 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 PCDHGA5Q9Y5G8 931 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 MYO16Q9Y6X6 1858 aa20.56■□□□□ 0.88
ITGA4-202ENST00000339307 TBC1D3BA6NDS4 549 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.55■□□□□ 0.88
ITGA4-202ENST00000339307 ALDH1A2O94788 518 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 RHOBTB3O94955 611 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 ADAM9Q13443 819 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 CRY1Q16526 586 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 KRBA2Q6ZNG9 492 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 INTS8Q75QN2 995 aaKnown RBP20.55■□□□□ 0.88
ITGA4-202ENST00000339307 BBS7Q8IWZ6 715 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 PGBD3Q8N328 593 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 ZMIZ2Q8NF64 920 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 TMEM174Q8WUU8 243 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 CYFIP2Q96F07 1278 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 SCAND2PQ9GZW5 306 aaPredicted RBP20.55■□□□□ 0.88
ITGA4-202ENST00000339307 VPS45Q9NRW7 570 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 RXFP3Q9NSD7 469 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 MYH10P35580 1976 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 EML5Q05BV3 1969 aa20.55■□□□□ 0.88
ITGA4-202ENST00000339307 SPAG17Q6Q759 2223 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 TLR5O60602 858 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 PSMC2P35998 433 aaKnown RBP20.54■□□□□ 0.88
ITGA4-202ENST00000339307 GRIA2P42262 883 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 MESP2Q0VG99 397 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 DPYDQ12882 1025 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 C1orf220Q5T0J3 134 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 SNX30Q5VWJ9 437 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 TCEAL6Q6IPX3 200 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 TAS1R2Q8TE23 839 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 TCEAL3Q969E4 200 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 OTUB2Q96DC9 234 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 ZFRQ96KR1 1074 aaKnown RBP20.54■□□□□ 0.88
ITGA4-202ENST00000339307 NT5C1AQ9BXI3 368 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 DNAI2Q9GZS0 605 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 POLMQ9NP87 494 aaPredicted RBP20.54■□□□□ 0.88
ITGA4-202ENST00000339307 IL37Q9NZH6 218 aa20.54■□□□□ 0.88
ITGA4-202ENST00000339307 CAVIN2O95810 425 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 TBX18O95935 607 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 ACO1P21399 889 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 EIF2DP41214 584 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 PGFP49763 221 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 TUBP50607 506 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 PPP3CAQ08209 521 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 EOGTQ5NDL2 527 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 TMEM92Q6UXU6 159 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 MDGA1Q8NFP4 955 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 DDX1Q92499 740 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 EEF2KMTQ96G04 330 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 TWNKQ96RR1 684 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 GOLPH3LQ9H4A5 285 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 GDPD2Q9HCC8 539 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CSNK1G1Q9HCP0 422 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 MYOFQ9NZM1 2061 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 KIAA1549LQ6ZVL6 1849 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 SGK1O00141 431 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 MAPK13O15264 365 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 MAP3K13O43283 966 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 ZNF202O95125 648 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 ZDHHC11BP0C7U3 371 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 ATP5C1P36542 298 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 GOLGA8FQ08AF8 430 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 GOLGA8DPQ0D2H9 430 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 ZNF394Q53GI3 561 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 PLA2G2CQ5R387 149 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 STPG1Q5TH74 334 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 GPRIN1Q7Z2K8 1008 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 C11orf74Q86VG3 221 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 TMEM25Q86YD3 366 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 IL17RCQ8NAC3 791 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 HMGB4Q8WW32 186 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 WBP2Q969T9 261 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CCDC34Q96HJ3 373 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CNOT6LQ96LI5 555 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CNTNAP3BQ96NU0 1288 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CNTNAP3Q9BZ76 1288 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 NIF3L1Q9GZT8 377 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CYP3A43Q9HB55 503 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 APOBEC3GQ9HC16 384 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 SPHK2Q9NRA0 654 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 DEC1Q9P2X7 70 aa20.53■□□□□ 0.88
ITGA4-202ENST00000339307 LSM7Q9UK45 103 aaKnown RBP20.53■□□□□ 0.88
ITGA4-202ENST00000339307 CYP26A1O43174 497 aa20.52■□□□□ 0.87
ITGA4-202ENST00000339307 TNFRSF4P43489 277 aa20.52■□□□□ 0.87
ITGA4-202ENST00000339307 DHPSP49366 369 aaPredicted RBP20.52■□□□□ 0.87
ITGA4-202ENST00000339307 PREPLQ4J6C6 727 aaPredicted RBP20.52■□□□□ 0.87
ITGA4-202ENST00000339307 RNF43Q68DV7 783 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms