RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GALNTL6Q49A17 601 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 ZNF677Q86XU0 584 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 ZNF560Q96MR9 790 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 PNMA5Q96PV4 448 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 SPON2Q9BUD6 331 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 ARHGAP23Q9P227 1491 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 FAM237BA0A1B0GVD1 139 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 DGKIO75912 1065 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 TUFMP49411 452 aaKnown RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 NR1H2P55055 460 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 SNRPFP62306 86 aaKnown RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 TMEM63BQ5T3F8 832 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 ZNF720Q7Z2F6 126 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 NDUFAF2Q8N183 169 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 SARS2Q9NP81 518 aaKnown RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 TAS2R1Q9NYW7 299 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 RSL24D1Q9UHA3 163 aaKnown RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 DMTF1Q9Y222 760 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 SLIT1O75093 1534 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 C3P01024 1663 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 A0A0J9YVX5 310 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 NEMP1O14524 444 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 SNRPAP09012 282 aaKnown RBP16.61■□□□□ 0.25
NPHP3-201ENST00000337331 RARBP10826 455 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 CYP11B1P15538 503 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 RRM1P23921 792 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 SERPINB1P30740 379 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 RAP1GDS1P52306 607 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 DRG2P55039 364 aaKnown RBP16.61■□□□□ 0.25
NPHP3-201ENST00000337331 ACVR2BQ13705 512 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 TMEM132DQ14C87 1099 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PCNX4Q63HM2 1172 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 TTC33Q6PID6 262 aaPredicted RBP16.61■□□□□ 0.25
NPHP3-201ENST00000337331 C3orf67Q6ZVT6 689 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 ULK2Q8IYT8 1036 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 FAM71DQ8N9W8 422 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 GLIS3Q8NEA6 775 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 RFWD2Q8NHY2 731 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 IFT43Q96FT9 208 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 RSAD1Q9HA92 442 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 DDHD2O94830 711 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 NET1Q7Z628 596 aaPredicted RBP16.61■□□□□ 0.25
NPHP3-201ENST00000337331 TAS1R2Q8TE23 839 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 GIPC2Q8TF65 315 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 SLC20A1Q8WUM9 679 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 SLC5A5Q92911 643 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 COX4I2Q96KJ9 171 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PPCSQ9HAB8 311 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 GPC6Q9Y625 555 aaPredicted RBP16.61■□□□□ 0.25
NPHP3-201ENST00000337331 MAP3K13O43283 966 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
NPHP3-201ENST00000337331 IL17AQ16552 155 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 VSTM1Q6UX27 236 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PRUNE1Q86TP1 453 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 CYP2W1Q8TAV3 490 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 UBA3Q8TBC4 463 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PAK5Q9P286 719 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PRELID1Q9Y255 219 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PPME1Q9Y570 386 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 PROCP04070 461 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 GZMAP12544 262 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 STMN1P16949 149 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 ZBTB18Q99592 522 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 BEGAINQ9BUH8 593 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 ING2Q9H160 280 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 COQ6Q9Y2Z9 468 aa16.61■□□□□ 0.25
NPHP3-201ENST00000337331 TMEM247A6NEH6 219 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 CYTH3O43739 400 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 SNX2O60749 519 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 GEMIN4P57678 1058 aaKnown RBP16.6■□□□□ 0.25
NPHP3-201ENST00000337331 TPI1P60174 286 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 ENDOVQ8N8Q3 282 aaKnown RBP16.6■□□□□ 0.25
NPHP3-201ENST00000337331 WDR70Q9NW82 654 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 PIN4Q9Y237 131 aaKnown RBP16.6■□□□□ 0.25
NPHP3-201ENST00000337331 ARIH1Q9Y4X5 557 aaPredicted RBP16.6■□□□□ 0.25
NPHP3-201ENST00000337331 KLHL2O95198 593 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 MYCP01106 439 aaPredicted RBP16.6■□□□□ 0.25
NPHP3-201ENST00000337331 MARCKSL1P49006 195 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 CALML6Q8TD86 181 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 NCLNQ969V3 563 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 CMTM5Q96DZ9 223 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 VPS50Q96JG6 964 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 NT5C1AQ9BXI3 368 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 RPTORQ8N122 1335 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 A0A0A6YYK5 440 aaPredicted RBP16.6■□□□□ 0.25
NPHP3-201ENST00000337331 MAP3K6O95382 1288 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 CCDC159P0C7I6 412 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 GFAPP14136 432 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 HSD17B4P51659 736 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 CUL2Q13617 745 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 STILQ15468 1287 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 FAXCQ5TGI0 409 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 ATF7IP2Q5U623 682 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 RNF148Q8N7C7 305 aa16.6■□□□□ 0.25
NPHP3-201ENST00000337331 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms