RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Wasf2Q8BH43 497 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 RalylQ8BTF8 293 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Slc38a7Q8BWH0 463 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Taf2Q8C176 1104 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Taco1Q8K0Z7 294 aaKnown RBP6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ints9Q8K114 658 aaKnown RBP6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fcho1Q8K285 873 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 TgdsQ8VDR7 355 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr395Q8VGR3 312 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pcdhga4Q91XY4 930 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Atad3Q925I1 591 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hsf2bpQ9D4G2 338 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tmem79Q9D709 391 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Xpo7Q9EPK7 1087 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Igdcc4Q9EQS9 1252 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Maged2Q9ER67 616 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gtf2ird1Q9JI57 1104 aaKnown RBP6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cnga3Q9JJZ8 631 aa6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 PygmQ9WUB3 842 aaKnown RBP6.52□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tldc2A2ACG1 198 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Nxpe3B9EKK6 559 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tada2bD3Z4Z0 420 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm3264L7N2C5 238 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ppargc1aO70343 797 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 L1camP11627 1260 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Atxn10P28658 475 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Npas2P97460 816 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 GmncQ3URY2 333 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Kctd16Q5DTY9 427 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Serpinb1cQ5SV42 375 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Prr14Q7TPN9 612 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Clec4a1Q80UI7 245 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Agap1Q8BXK8 857 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 NemfQ8CCP0 1064 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Krtcap3Q8K177 240 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gspt1Q8R050 636 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Rpa1Q8VEE4 623 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Decr1Q9CQ62 335 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sgf29Q9DA08 293 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cables1Q9ESJ1 568 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cpsf3Q9QXK7 684 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 RpgrQ9R0X5 1001 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Anapc7Q9WVM3 565 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Diaph3Q9Z207 1171 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ank3G5E8K5 1961 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ptpn3A2ALK8 913 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Glt1d1A4FUP9 346 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Vwa5b1A9Z1V5 1215 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Art2bO35975 289 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hoxc6P10629 235 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ass1P16460 412 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tgfb3P17125 410 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cyp17a1P27786 507 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pdcd2P46718 343 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 LipeP54310 759 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 NcstnP57716 708 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Arl4cP61208 192 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sh3bp2Q06649 559 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mylk3Q3UIZ8 795 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Wdr18Q4VBE8 431 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Myl6Q60605 151 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Psen2Q61144 448 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dpysl3Q62188 570 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cyp3a11Q64459 504 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dync1li2Q6PDL0 492 aaKnown RBP6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zswim5Q80TC6 1188 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zdhhc17Q80TN5 632 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Q80ZQ3 298 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Qsox1Q8BND5 748 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Phka2Q8BWJ3 1235 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dus1lQ8C2P3 475 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Kctd12bQ8C7J6 292 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Kdm1bQ8CIG3 826 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sirt5Q8K2C6 310 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 OlahQ8R197 265 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mtfr2Q8VED8 361 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr397Q8VEZ6 315 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Plcb4Q91UZ1 1175 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Asb7Q91ZU0 318 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Adi1Q99JT9 179 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Castor1Q9CWQ8 331 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 PrameQ9D4Z5 464 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 1700016D06RikQ9DAA5 166 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Robo3Q9Z2I4 1366 aa6.51□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dpy19l4A2AJQ3 722 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm382B1AXN3 1250 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pdzd7E9Q9W7 1021 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zfp607bG3X9H3 648 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm21962L7N280 338 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Unc5cO08747 931 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hdac3O88895 424 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tnnc2P20801 160 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 RxraP28700 467 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 TxkP42682 527 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tulp2P46686 562 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 PctpP53808 214 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Stmn1P54227 149 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Kcnn2P58390 839 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fermt1P59113 677 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ythdf1P59326 559 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms