RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 PCDHGC3Q9UN70 934 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 CSPP1Q1MSJ5 1256 aa4.59□□□□□ -1.67
CD46-219ENST00000636114 TJAP1Q5JTD0 557 aa4.59□□□□□ -1.67
CD46-219ENST00000636114 PROCA1Q8NCQ7 364 aaPredicted RBP4.59□□□□□ -1.67
CD46-219ENST00000636114 ZBTB3Q9H5J0 574 aa4.59□□□□□ -1.67
CD46-219ENST00000636114 IL21Q9HBE4 155 aa4.59□□□□□ -1.67
CD46-219ENST00000636114 SALL2Q9Y467 1007 aaPredicted RBP4.59□□□□□ -1.67
CD46-219ENST00000636114 PCDHB15Q9Y5E8 787 aa4.58□□□□□ -1.68
CD46-219ENST00000636114 SPDYE5A6NIY4 337 aa4.58□□□□□ -1.68
CD46-219ENST00000636114 C6orf229H3BNL8 230 aa4.58□□□□□ -1.68
CD46-219ENST00000636114 ZPR1O75312 459 aa4.58□□□□□ -1.68
CD46-219ENST00000636114 FMNL1O95466 1100 aaPredicted RBP4.58□□□□□ -1.68
CD46-219ENST00000636114 ITGBL1O95965 494 aaPredicted RBP4.58□□□□□ -1.68
CD46-219ENST00000636114 MTMR2Q13614 643 aa4.58□□□□□ -1.68
CD46-219ENST00000636114 QPCTQ16769 361 aa4.58□□□□□ -1.68
CD46-219ENST00000636114 NUTM2BA6NNL0 878 aaPredicted RBP4.57□□□□□ -1.68
CD46-219ENST00000636114 NUTM2EB1AL46 878 aaPredicted RBP4.57□□□□□ -1.68
CD46-219ENST00000636114 LILRB3O75022 631 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 HRCP23327 699 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 NUTM2DQ5VT03 806 aaPredicted RBP4.57□□□□□ -1.68
CD46-219ENST00000636114 BRICD5Q6PL45 260 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 RNF19BQ6ZMZ0 732 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 NUTM2AQ8IVF1 878 aaPredicted RBP4.57□□□□□ -1.68
CD46-219ENST00000636114 THAP11Q96EK4 314 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 PPP2R2DQ66LE6 453 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 RETREG3Q86VR2 466 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 CABLES1Q8TDN4 633 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 SPSB2Q99619 263 aa4.57□□□□□ -1.68
CD46-219ENST00000636114 KCNC4Q03721 635 aa4.56□□□□□ -1.68
CD46-219ENST00000636114 ZNF516Q92618 1163 aa4.56□□□□□ -1.68
CD46-219ENST00000636114 SYMPKQ92797 1274 aaKnown RBP4.56□□□□□ -1.68
CD46-219ENST00000636114 USB1Q9BQ65 265 aaKnown RBP4.56□□□□□ -1.68
CD46-219ENST00000636114 TLL1O43897 1013 aa4.55□□□□□ -1.68
CD46-219ENST00000636114 ADH1BP00325 375 aa4.55□□□□□ -1.68
CD46-219ENST00000636114 RFC5P40937 340 aa4.55□□□□□ -1.68
CD46-219ENST00000636114 MSS51Q4VC12 460 aa4.55□□□□□ -1.68
CD46-219ENST00000636114 PRR7Q8TB68 274 aa4.55□□□□□ -1.68
CD46-219ENST00000636114 RTL5Q5HYW3 569 aaPredicted RBP4.54□□□□□ -1.68
CD46-219ENST00000636114 FBXO31Q5XUX0 539 aaPredicted RBP4.54□□□□□ -1.68
CD46-219ENST00000636114 HELBQ8NG08 1087 aaPredicted RBP4.54□□□□□ -1.68
CD46-219ENST00000636114 ZCCHC6Q5VYS8 1495 aaKnown RBP4.54□□□□□ -1.68
CD46-219ENST00000636114 CFAP99D6REC4 459 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 DESI1Q6ICB0 168 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 FAM160A2Q8N612 972 aaPredicted RBP4.53□□□□□ -1.68
CD46-219ENST00000636114 TMEM259Q4ZIN3 620 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 IFFO2Q5TF58 517 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 NKX2-3Q8TAU0 364 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 TSC1Q92574 1164 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 SLC6A16Q9GZN6 736 aa4.53□□□□□ -1.68
CD46-219ENST00000636114 JUNDP17535 347 aa4.52□□□□□ -1.69
CD46-219ENST00000636114 MMP16P51512 607 aa4.52□□□□□ -1.69
CD46-219ENST00000636114 AP1G2O75843 785 aa4.52□□□□□ -1.69
CD46-219ENST00000636114 DXOO77932 396 aaKnown RBP4.52□□□□□ -1.69
CD46-219ENST00000636114 PRDM9Q9NQV7 894 aa4.52□□□□□ -1.69
CD46-219ENST00000636114 GTF3C3Q9Y5Q9 886 aa4.52□□□□□ -1.69
CD46-219ENST00000636114 S1PR4O95977 384 aa4.51□□□□□ -1.69
CD46-219ENST00000636114 BANK1Q8NDB2 785 aa4.51□□□□□ -1.69
CD46-219ENST00000636114 PLA2G2EQ9NZK7 142 aa4.51□□□□□ -1.69
CD46-219ENST00000636114 USP17L8P0C7I0 530 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 GGCXP38435 758 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 PTPRNQ16849 979 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 CTDSPL2Q05D32 466 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 FLIIQ13045 1269 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 LYPD8Q6UX82 237 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 DCAF1Q9Y4B6 1507 aa4.5□□□□□ -1.69
CD46-219ENST00000636114 SOCS7O14512 581 aa4.49□□□□□ -1.69
CD46-219ENST00000636114 PER1O15534 1290 aaPredicted RBP4.49□□□□□ -1.69
CD46-219ENST00000636114 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
CD46-219ENST00000636114 CCNYL3P0C7X3 344 aa4.49□□□□□ -1.69
CD46-219ENST00000636114 MCM6Q14566 821 aa4.49□□□□□ -1.69
CD46-219ENST00000636114 PPP1R18Q6NYC8 613 aa4.49□□□□□ -1.69
CD46-219ENST00000636114 NUDT12Q9BQG2 462 aa4.49□□□□□ -1.69
CD46-219ENST00000636114 IRX2Q9BZI1 471 aaPredicted RBP4.49□□□□□ -1.69
CD46-219ENST00000636114 RNF223E7ERA6 249 aa4.48□□□□□ -1.69
CD46-219ENST00000636114 APBB1O00213 710 aa4.48□□□□□ -1.69
CD46-219ENST00000636114 ANKLE1Q8NAG6 615 aa4.48□□□□□ -1.69
CD46-219ENST00000636114 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.48□□□□□ -1.69
CD46-219ENST00000636114 FCF1Q9Y324 198 aaKnown RBP4.48□□□□□ -1.69
CD46-219ENST00000636114 LRRN4Q8WUT4 740 aa4.47□□□□□ -1.69
CD46-219ENST00000636114 A0A0G2JS52 829 aa4.47□□□□□ -1.69
CD46-219ENST00000636114 F12P00748 615 aaPredicted RBP4.47□□□□□ -1.69
CD46-219ENST00000636114 MTMR14Q8NCE2 650 aa4.47□□□□□ -1.69
CD46-219ENST00000636114 HMX1Q9NP08 348 aaPredicted RBP4.47□□□□□ -1.69
CD46-219ENST00000636114 SNRKQ9NRH2 765 aa4.47□□□□□ -1.69
CD46-219ENST00000636114 CCDC24Q8N4L8 307 aa4.46□□□□□ -1.7
CD46-219ENST00000636114 EVA1BQ9NVM1 165 aa4.46□□□□□ -1.7
CD46-219ENST00000636114 PPEF1O14829 653 aaPredicted RBP4.45□□□□□ -1.7
CD46-219ENST00000636114 CTHP32929 405 aa4.45□□□□□ -1.7
CD46-219ENST00000636114 KCNH2Q12809 1159 aa4.45□□□□□ -1.7
CD46-219ENST00000636114 GJD4Q96KN9 370 aaPredicted RBP4.45□□□□□ -1.7
CD46-219ENST00000636114 MAP10Q9P2G4 905 aa4.45□□□□□ -1.7
CD46-219ENST00000636114 PRM3Q9NNZ6 103 aa4.45□□□□□ -1.7
CD46-219ENST00000636114 NR6A1Q15406 480 aa4.44□□□□□ -1.7
CD46-219ENST00000636114 PNMA1Q8ND90 353 aa4.44□□□□□ -1.7
CD46-219ENST00000636114 TRIM34Q9BYJ4 488 aa4.44□□□□□ -1.7
CD46-219ENST00000636114 NDUFB9Q9Y6M9 179 aa4.44□□□□□ -1.7
CD46-219ENST00000636114 ZBTB24O43167 697 aaPredicted RBP4.44□□□□□ -1.7
CD46-219ENST00000636114 UBTFP17480 764 aaKnown RBP4.44□□□□□ -1.7
CD46-219ENST00000636114 PLA2G2CQ5R387 149 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms