RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 H0YHG0 523 aa6.67□□□□□ -1.34
SCN1A-209ENST00000635750 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
SCN1A-209ENST00000635750 NEUROD6Q96NK8 337 aa6.67□□□□□ -1.34
SCN1A-209ENST00000635750 TRAK1Q9UPV9 953 aa6.67□□□□□ -1.34
SCN1A-209ENST00000635750 SMC3Q9UQE7 1217 aa6.67□□□□□ -1.34
SCN1A-209ENST00000635750 ERC1Q8IUD2 1116 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 PDILTQ8N807 584 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 HSP90AA2PQ14568 343 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-209ENST00000635750 NACADO15069 1562 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 GOLGA6L10A6NI86 522 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 CARMIL1Q5VZK9 1371 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 PIP4K2AP48426 406 aaPredicted RBP6.66□□□□□ -1.34
SCN1A-209ENST00000635750 RBM5P52756 815 aaKnown RBP eCLIP6.66□□□□□ -1.34
SCN1A-209ENST00000635750 PDE3BQ13370 1112 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 ENOX2Q16206 610 aaKnown RBP6.66□□□□□ -1.34
SCN1A-209ENST00000635750 GRIPAP1Q4V328 841 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 CWC15Q9P013 229 aaKnown RBP6.66□□□□□ -1.34
SCN1A-209ENST00000635750 PSMA5P28066 241 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 NECTIN2Q92692 538 aa6.66□□□□□ -1.34
SCN1A-209ENST00000635750 ZKSCAN2Q63HK3 967 aa6.65□□□□□ -1.34
SCN1A-209ENST00000635750 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.34
SCN1A-209ENST00000635750 CUX2O14529 1486 aa6.65□□□□□ -1.34
SCN1A-209ENST00000635750 PRDM2Q13029 1718 aa6.65□□□□□ -1.34
SCN1A-209ENST00000635750 FOSBP53539 338 aa6.65□□□□□ -1.35
SCN1A-209ENST00000635750 ZNHIT6Q9NWK9 470 aaKnown RBP6.65□□□□□ -1.35
SCN1A-209ENST00000635750 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.35
SCN1A-209ENST00000635750 STIM1Q13586 685 aa6.65□□□□□ -1.35
SCN1A-209ENST00000635750 SKIDA1Q1XH10 827 aa6.65□□□□□ -1.35
SCN1A-209ENST00000635750 VPS37CA5D8V6 355 aaPredicted RBP6.65□□□□□ -1.35
SCN1A-209ENST00000635750 GOLGA6L7A0A1B0GV03 622 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 ELL2O00472 640 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-209ENST00000635750 PDS5BQ9NTI5 1447 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC18Q5T9S5 1454 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 CCP110O43303 1012 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 HMGN5P82970 282 aaKnown RBP6.64□□□□□ -1.35
SCN1A-209ENST00000635750 RABEP1Q15276 862 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 SMG6Q86US8 1419 aaKnown RBP6.64□□□□□ -1.35
SCN1A-209ENST00000635750 INTS3Q68E01 1043 aaKnown RBP6.64□□□□□ -1.35
SCN1A-209ENST00000635750 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-209ENST00000635750 KIF15Q9NS87 1388 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 NLRP13Q86W25 1043 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 DRC1Q96MC2 740 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 MPHOSPH9Q99550 1183 aa6.64□□□□□ -1.35
SCN1A-209ENST00000635750 POTEJP0CG39 1038 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 CENPQQ7L2Z9 268 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-209ENST00000635750 IFT57Q9NWB7 429 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 FMN1Q68DA7 1419 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 TNIKQ9UKE5 1360 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 TTLL5Q6EMB2 1281 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 API5Q9BZZ5 524 aaKnown RBP6.63□□□□□ -1.35
SCN1A-209ENST00000635750 DDX19BQ9UMR2 479 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 E9PSI1 815 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 TSPYL4Q9UJ04 414 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 CNTROBQ8N137 903 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 SDF4Q9BRK5 362 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 KIF7Q2M1P5 1343 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 HNRNPMP52272 730 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCN1A-209ENST00000635750 AIMP1Q12904 312 aaKnown RBP6.63□□□□□ -1.35
SCN1A-209ENST00000635750 PLCD4Q9BRC7 762 aa6.63□□□□□ -1.35
SCN1A-209ENST00000635750 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCN1A-209ENST00000635750 RRP7AQ9Y3A4 280 aaKnown RBP6.63□□□□□ -1.35
SCN1A-209ENST00000635750 HIP1O00291 1037 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 PAXIP1Q6ZW49 1069 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-209ENST00000635750 FEZ1Q99689 392 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 IBSPP21815 317 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-209ENST00000635750 ANAPC15P60006 121 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 PPP4R3AQ6IN85 833 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 CNNM1Q9NRU3 951 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 IPO9Q96P70 1041 aaKnown RBP6.62□□□□□ -1.35
SCN1A-209ENST00000635750 ZHX3Q9H4I2 956 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 NLRP2Q9NX02 1062 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 DEF6Q9H4E7 631 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 MIA2Q96PC5 1412 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 STAMBPO95630 424 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC91Q7Z6B0 441 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC112Q8NEF3 446 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 INCENPQ9NQS7 918 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC144AA2RUR9 1427 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 DIAPH1O60610 1272 aaKnown RBP6.62□□□□□ -1.35
SCN1A-209ENST00000635750 TNIP1Q15025 636 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 TTC39AQ5SRH9 613 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 SOGA3Q5TF21 947 aa6.62□□□□□ -1.35
SCN1A-209ENST00000635750 GPRASP1Q5JY77 1395 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 LETM1O95202 739 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 ZNF76P36508 570 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 NUCB2P80303 420 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 ZSCAN29Q8IWY8 852 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 BMP2KQ9NSY1 1161 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 CT47B1P0C2W7 299 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC158Q5M9N0 1113 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 CCDC181Q5TID7 509 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 TSPYL1Q9H0U9 437 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 FAM177BA6PVY3 158 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 RSPH6AQ9H0K4 717 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 TMOD2Q9NZR1 351 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 KINO60870 393 aaKnown RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 BRPF1P55201 1214 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-209ENST00000635750 NACAP1Q9BZK3 213 aa6.61□□□□□ -1.35
SCN1A-209ENST00000635750 DACH1Q9UI36 760 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms