RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 NEUROD2Q15784 382 aa7.65□□□□□ -1.18
SRP54-214ENST00000630962 RSBN1LQ6PCB5 846 aaPredicted RBP7.65□□□□□ -1.18
SRP54-214ENST00000630962 RIC3Q7Z5B4 369 aa7.65□□□□□ -1.18
SRP54-214ENST00000630962 MOXD2PA6NHM9 499 aa7.64□□□□□ -1.19
SRP54-214ENST00000630962 RNF223E7ERA6 249 aa7.64□□□□□ -1.19
SRP54-214ENST00000630962 MTMR2Q13614 643 aa7.64□□□□□ -1.19
SRP54-214ENST00000630962 ZBTB3Q9H5J0 574 aa7.64□□□□□ -1.19
SRP54-214ENST00000630962 MMP16P51512 607 aa7.63□□□□□ -1.19
SRP54-214ENST00000630962 DESI1Q6ICB0 168 aa7.63□□□□□ -1.19
SRP54-214ENST00000630962 RNF19BQ6ZMZ0 732 aa7.63□□□□□ -1.19
SRP54-214ENST00000630962 FAM160A2Q8N612 972 aaPredicted RBP7.63□□□□□ -1.19
SRP54-214ENST00000630962 GOPCQ9HD26 462 aa7.63□□□□□ -1.19
SRP54-214ENST00000630962 RPIAP49247 311 aa7.62□□□□□ -1.19
SRP54-214ENST00000630962 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
SRP54-214ENST00000630962 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
SRP54-214ENST00000630962 ZBTB24O43167 697 aaPredicted RBP7.61□□□□□ -1.19
SRP54-214ENST00000630962 DXOO77932 396 aaKnown RBP7.61□□□□□ -1.19
SRP54-214ENST00000630962 JUNDP17535 347 aa7.61□□□□□ -1.19
SRP54-214ENST00000630962 NDUFV2P19404 249 aa7.61□□□□□ -1.19
SRP54-214ENST00000630962 CLK2P49760 499 aaKnown RBP7.61□□□□□ -1.19
SRP54-214ENST00000630962 SKIV2LQ15477 1246 aaKnown RBP7.61□□□□□ -1.19
SRP54-214ENST00000630962 SH3D19Q5HYK7 790 aa7.61□□□□□ -1.19
SRP54-214ENST00000630962 GPBP1L1Q9HC44 474 aaPredicted RBP7.61□□□□□ -1.19
SRP54-214ENST00000630962 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
SRP54-214ENST00000630962 SLC19A1P41440 591 aa7.6□□□□□ -1.19
SRP54-214ENST00000630962 GUCA2AQ02747 115 aa7.6□□□□□ -1.19
SRP54-214ENST00000630962 LAPTM4AQ15012 233 aa7.6□□□□□ -1.19
SRP54-214ENST00000630962 HLA-CQ95604 372 aa7.6□□□□□ -1.19
SRP54-214ENST00000630962 PCDHGC3Q9UN70 934 aa7.6□□□□□ -1.19
SRP54-214ENST00000630962 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
SRP54-214ENST00000630962 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
SRP54-214ENST00000630962 NUTM2DQ5VT03 806 aaPredicted RBP7.58□□□□□ -1.2
SRP54-214ENST00000630962 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
SRP54-214ENST00000630962 PRR7Q8TB68 274 aa7.58□□□□□ -1.2
SRP54-214ENST00000630962 FAM117AQ9C073 453 aa7.58□□□□□ -1.2
SRP54-214ENST00000630962 FCF1Q9Y324 198 aaKnown RBP7.58□□□□□ -1.2
SRP54-214ENST00000630962 BRPF1P55201 1214 aaPredicted RBP7.57□□□□□ -1.2
SRP54-214ENST00000630962 PTPRNQ16849 979 aa7.57□□□□□ -1.2
SRP54-214ENST00000630962 PPEF1O14829 653 aaPredicted RBP7.56□□□□□ -1.2
SRP54-214ENST00000630962 LILRB3O75022 631 aa7.56□□□□□ -1.2
SRP54-214ENST00000630962 HRCP23327 699 aa7.56□□□□□ -1.2
SRP54-214ENST00000630962 ZNF598Q86UK7 904 aaKnown RBP7.56□□□□□ -1.2
SRP54-214ENST00000630962 HELBQ8NG08 1087 aaPredicted RBP7.56□□□□□ -1.2
SRP54-214ENST00000630962 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
SRP54-214ENST00000630962 ATP1B4Q9UN42 357 aaPredicted RBP7.56□□□□□ -1.2
SRP54-214ENST00000630962 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
SRP54-214ENST00000630962 SYMPKQ92797 1274 aaKnown RBP7.55□□□□□ -1.2
SRP54-214ENST00000630962 PCMTD1Q96MG8 357 aaPredicted RBP7.55□□□□□ -1.2
SRP54-214ENST00000630962 NUDT12Q9BQG2 462 aa7.55□□□□□ -1.2
SRP54-214ENST00000630962 PRDM9Q9NQV7 894 aa7.55□□□□□ -1.2
SRP54-214ENST00000630962 PCDHB15Q9Y5E8 787 aa7.55□□□□□ -1.2
SRP54-214ENST00000630962 CCNYL3P0C7X3 344 aa7.54□□□□□ -1.2
SRP54-214ENST00000630962 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
SRP54-214ENST00000630962 LIMD1Q9UGP4 676 aa7.54□□□□□ -1.2
SRP54-214ENST00000630962 PLEKHG3A1L390 1219 aa7.53□□□□□ -1.2
SRP54-214ENST00000630962 CSPP1Q1MSJ5 1256 aa7.53□□□□□ -1.2
SRP54-214ENST00000630962 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
SRP54-214ENST00000630962 PPP2R2DQ66LE6 453 aa7.52□□□□□ -1.21
SRP54-214ENST00000630962 LYPD8Q6UX82 237 aa7.52□□□□□ -1.21
SRP54-214ENST00000630962 EVA1BQ9NVM1 165 aa7.52□□□□□ -1.21
SRP54-214ENST00000630962 WNT7BP56706 349 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 PRR20EP86478 221 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 PRR20CP86479 221 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 PRR20DP86480 221 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 PRR20BP86481 221 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 PRR20AP86496 221 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 ZNF697Q5TEC3 545 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 LIAT1Q6ZQX7 453 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 IL27Q8NEV9 243 aa7.51□□□□□ -1.21
SRP54-214ENST00000630962 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.51□□□□□ -1.21
SRP54-214ENST00000630962 KCNH2Q12809 1159 aa7.5□□□□□ -1.21
SRP54-214ENST00000630962 TRIM32Q13049 653 aa7.5□□□□□ -1.21
SRP54-214ENST00000630962 ARMC2Q8NEN0 867 aa7.5□□□□□ -1.21
SRP54-214ENST00000630962 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
SRP54-214ENST00000630962 CFAP99D6REC4 459 aa7.49□□□□□ -1.21
SRP54-214ENST00000630962 NRG2O14511 850 aaPredicted RBP7.49□□□□□ -1.21
SRP54-214ENST00000630962 QPCTQ16769 361 aa7.49□□□□□ -1.21
SRP54-214ENST00000630962 PLA2G2CQ5R387 149 aa7.49□□□□□ -1.21
SRP54-214ENST00000630962 PNMA1Q8ND90 353 aa7.49□□□□□ -1.21
SRP54-214ENST00000630962 TSC1Q92574 1164 aa7.49□□□□□ -1.21
SRP54-214ENST00000630962 PRKCSHP14314 528 aaPredicted RBP7.48□□□□□ -1.21
SRP54-214ENST00000630962 TMEM259Q4ZIN3 620 aa7.48□□□□□ -1.21
SRP54-214ENST00000630962 PDZRN3Q9UPQ7 1066 aa7.48□□□□□ -1.21
SRP54-214ENST00000630962 GFRA3O60609 400 aa7.47□□□□□ -1.21
SRP54-214ENST00000630962 CTHP32929 405 aa7.47□□□□□ -1.21
SRP54-214ENST00000630962 RTL5Q5HYW3 569 aaPredicted RBP7.46□□□□□ -1.22
SRP54-214ENST00000630962 PROCA1Q8NCQ7 364 aaPredicted RBP7.46□□□□□ -1.22
SRP54-214ENST00000630962 EMID1Q96A84 441 aaPredicted RBP7.46□□□□□ -1.22
SRP54-214ENST00000630962 UNC93B1Q9H1C4 597 aa7.46□□□□□ -1.22
SRP54-214ENST00000630962 APBB1O00213 710 aa7.45□□□□□ -1.22
SRP54-214ENST00000630962 WNT7AO00755 349 aa7.45□□□□□ -1.22
SRP54-214ENST00000630962 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
SRP54-214ENST00000630962 GDF9O60383 454 aa7.44□□□□□ -1.22
SRP54-214ENST00000630962 F12P00748 615 aaPredicted RBP7.44□□□□□ -1.22
SRP54-214ENST00000630962 NBPF14Q5TI25 921 aa7.44□□□□□ -1.22
SRP54-214ENST00000630962 CYP4X1Q8N118 509 aa7.43□□□□□ -1.22
SRP54-214ENST00000630962 ZC3H4Q9UPT8 1303 aaKnown RBP7.43□□□□□ -1.22
SRP54-214ENST00000630962 AP1G2O75843 785 aa7.42□□□□□ -1.22
SRP54-214ENST00000630962 DGAT1O75907 488 aa7.42□□□□□ -1.22
SRP54-214ENST00000630962 RFC5P40937 340 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms