RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
TNFAIP3-211ENST00000621150 MED1Q15648 1581 aaPredicted RBP17.47■□□□□ 0.39
TNFAIP3-211ENST00000621150 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
TNFAIP3-211ENST00000621150 KIF1BO60333 1816 aa17.46■□□□□ 0.39
TNFAIP3-211ENST00000621150 MIER1Q8N108 512 aa17.46■□□□□ 0.39
TNFAIP3-211ENST00000621150 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
TNFAIP3-211ENST00000621150 LAMC1P11047 1609 aa17.44■□□□□ 0.38
TNFAIP3-211ENST00000621150 NRXN3Q9Y4C0 1643 aa17.44■□□□□ 0.38
TNFAIP3-211ENST00000621150 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
TNFAIP3-211ENST00000621150 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
TNFAIP3-211ENST00000621150 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
TNFAIP3-211ENST00000621150 USP47Q96K76 1375 aa17.42■□□□□ 0.38
TNFAIP3-211ENST00000621150 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
TNFAIP3-211ENST00000621150 TSHZ2Q9NRE2 1034 aa17.42■□□□□ 0.38
TNFAIP3-211ENST00000621150 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
TNFAIP3-211ENST00000621150 MSH6P52701 1360 aa17.42■□□□□ 0.38
TNFAIP3-211ENST00000621150 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
TNFAIP3-211ENST00000621150 NEXMIFQ5QGS0 1516 aa17.41■□□□□ 0.38
TNFAIP3-211ENST00000621150 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
TNFAIP3-211ENST00000621150 MYOM2P54296 1465 aa17.4■□□□□ 0.38
TNFAIP3-211ENST00000621150 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.38
TNFAIP3-211ENST00000621150 ERICH6Q7L0X2 663 aa17.39■□□□□ 0.38
TNFAIP3-211ENST00000621150 IFT172Q9UG01 1749 aa17.39■□□□□ 0.37
TNFAIP3-211ENST00000621150 PTPRUQ92729 1446 aa17.39■□□□□ 0.37
TNFAIP3-211ENST00000621150 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
TNFAIP3-211ENST00000621150 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
TNFAIP3-211ENST00000621150 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
TNFAIP3-211ENST00000621150 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP3-211ENST00000621150 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
TNFAIP3-211ENST00000621150 ROCK2O75116 1388 aaKnown RBP17.37■□□□□ 0.37
TNFAIP3-211ENST00000621150 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
TNFAIP3-211ENST00000621150 SOCS7O14512 581 aa17.37■□□□□ 0.37
TNFAIP3-211ENST00000621150 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
TNFAIP3-211ENST00000621150 SLAIN2Q9P270 581 aa17.36■□□□□ 0.37
TNFAIP3-211ENST00000621150 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
TNFAIP3-211ENST00000621150 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
TNFAIP3-211ENST00000621150 ZNF219Q9P2Y4 722 aaPredicted RBP17.34■□□□□ 0.37
TNFAIP3-211ENST00000621150 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
TNFAIP3-211ENST00000621150 PHLPP1O60346 1717 aa17.33■□□□□ 0.37
TNFAIP3-211ENST00000621150 C14orf37Q86TY3 774 aa17.33■□□□□ 0.37
TNFAIP3-211ENST00000621150 PPLO60437 1756 aa17.33■□□□□ 0.36
TNFAIP3-211ENST00000621150 METP08581 1390 aa17.33■□□□□ 0.36
TNFAIP3-211ENST00000621150 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.36
TNFAIP3-211ENST00000621150 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
TNFAIP3-211ENST00000621150 C19orf44Q9H6X5 657 aa17.32■□□□□ 0.36
TNFAIP3-211ENST00000621150 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
TNFAIP3-211ENST00000621150 NBR1Q14596 966 aa17.31■□□□□ 0.36
TNFAIP3-211ENST00000621150 CADPS2Q86UW7 1296 aa17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 ATF3P18847 181 aa17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 HOMEZQ8IX15 550 aa17.29■□□□□ 0.36
TNFAIP3-211ENST00000621150 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
TNFAIP3-211ENST00000621150 COL16A1Q07092 1604 aaPredicted RBP17.27■□□□□ 0.36
TNFAIP3-211ENST00000621150 PIK3C2GO75747 1445 aa17.27■□□□□ 0.36
TNFAIP3-211ENST00000621150 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
TNFAIP3-211ENST00000621150 DCCP43146 1447 aa17.26■□□□□ 0.35
TNFAIP3-211ENST00000621150 TESK2Q96S53 571 aa17.25■□□□□ 0.35
TNFAIP3-211ENST00000621150 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
TNFAIP3-211ENST00000621150 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP3-211ENST00000621150 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP3-211ENST00000621150 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
TNFAIP3-211ENST00000621150 TMEM132AQ24JP5 1023 aa17.21■□□□□ 0.35
TNFAIP3-211ENST00000621150 JCADQ9P266 1359 aa17.21■□□□□ 0.35
TNFAIP3-211ENST00000621150 MST1RQ04912 1400 aa17.21■□□□□ 0.35
TNFAIP3-211ENST00000621150 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
TNFAIP3-211ENST00000621150 BRINP3Q76B58 766 aa17.21■□□□□ 0.35
TNFAIP3-211ENST00000621150 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
TNFAIP3-211ENST00000621150 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
TNFAIP3-211ENST00000621150 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
TNFAIP3-211ENST00000621150 ASXL1Q8IXJ9 1541 aa17.19■□□□□ 0.34
TNFAIP3-211ENST00000621150 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
TNFAIP3-211ENST00000621150 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
TNFAIP3-211ENST00000621150 NHSL1Q5SYE7 1610 aa17.19■□□□□ 0.34
TNFAIP3-211ENST00000621150 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
TNFAIP3-211ENST00000621150 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
TNFAIP3-211ENST00000621150 ANP32CO43423 234 aa17.17■□□□□ 0.34
TNFAIP3-211ENST00000621150 LRP6O75581 1613 aa17.14■□□□□ 0.33
TNFAIP3-211ENST00000621150 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
TNFAIP3-211ENST00000621150 RGL2O15211 777 aa17.13■□□□□ 0.33
TNFAIP3-211ENST00000621150 EIF3AQ14152 1382 aaKnown RBP17.13■□□□□ 0.33
TNFAIP3-211ENST00000621150 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
TNFAIP3-211ENST00000621150 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
TNFAIP3-211ENST00000621150 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
TNFAIP3-211ENST00000621150 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
TNFAIP3-211ENST00000621150 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
TNFAIP3-211ENST00000621150 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
TNFAIP3-211ENST00000621150 TMF1P82094 1093 aa17.1■□□□□ 0.33
TNFAIP3-211ENST00000621150 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
TNFAIP3-211ENST00000621150 TECPR2O15040 1411 aa17.09■□□□□ 0.33
TNFAIP3-211ENST00000621150 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
TNFAIP3-211ENST00000621150 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
TNFAIP3-211ENST00000621150 STK26Q9P289 416 aa17.08■□□□□ 0.32
TNFAIP3-211ENST00000621150 LRPPRCP42704 1394 aaKnown RBP17.08■□□□□ 0.32
TNFAIP3-211ENST00000621150 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
TNFAIP3-211ENST00000621150 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
TNFAIP3-211ENST00000621150 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
TNFAIP3-211ENST00000621150 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms