RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PDE4AP27815 886 aa22.7■■□□□ 1.22
GABPB1-212ENST00000615671 RNF20Q5VTR2 975 aa22.7■■□□□ 1.22
GABPB1-212ENST00000615671 ATP2B2Q01814 1243 aa22.7■■□□□ 1.22
GABPB1-212ENST00000615671 LNPKQ9C0E8 428 aa22.69■■□□□ 1.22
GABPB1-212ENST00000615671 RALYLQ86SE5 291 aaKnown RBP22.69■■□□□ 1.22
GABPB1-212ENST00000615671 CHMP4CQ96CF2 233 aa22.69■■□□□ 1.22
GABPB1-212ENST00000615671 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
GABPB1-212ENST00000615671 ABTB2Q8N961 1025 aa22.68■■□□□ 1.22
GABPB1-212ENST00000615671 EPS15P42566 896 aa22.68■■□□□ 1.22
GABPB1-212ENST00000615671 RRP12Q5JTH9 1297 aaKnown RBP22.68■■□□□ 1.22
GABPB1-212ENST00000615671 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
GABPB1-212ENST00000615671 WIZO95785 1651 aa22.68■■□□□ 1.22
GABPB1-212ENST00000615671 REC8O95072 547 aa22.68■■□□□ 1.22
GABPB1-212ENST00000615671 SMC3Q9UQE7 1217 aa22.68■■□□□ 1.22
GABPB1-212ENST00000615671 ATP2B1P20020 1258 aa22.67■■□□□ 1.22
GABPB1-212ENST00000615671 TTLL5Q6EMB2 1281 aa22.67■■□□□ 1.22
GABPB1-212ENST00000615671 SF3B2Q13435 895 aaKnown RBP22.66■■□□□ 1.22
GABPB1-212ENST00000615671 HOOK1Q9UJC3 728 aaKnown RBP22.66■■□□□ 1.22
GABPB1-212ENST00000615671 SAFBQ15424 915 aaKnown RBP eCLIP22.66■■□□□ 1.22
GABPB1-212ENST00000615671 KIF6Q6ZMV9 814 aa22.66■■□□□ 1.22
GABPB1-212ENST00000615671 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
GABPB1-212ENST00000615671 IBSPP21815 317 aaPredicted RBP22.64■■□□□ 1.22
GABPB1-212ENST00000615671 SETQ01105 290 aaPredicted RBP22.64■■□□□ 1.22
GABPB1-212ENST00000615671 SKIDA1Q1XH10 827 aa22.64■■□□□ 1.21
GABPB1-212ENST00000615671 PAF1Q8N7H5 531 aa22.64■■□□□ 1.21
GABPB1-212ENST00000615671 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.21
GABPB1-212ENST00000615671 UBTFL1P0CB47 393 aaPredicted RBP22.63■■□□□ 1.21
GABPB1-212ENST00000615671 PDILTQ8N807 584 aa22.63■■□□□ 1.21
GABPB1-212ENST00000615671 SASS6Q6UVJ0 657 aa22.62■■□□□ 1.21
GABPB1-212ENST00000615671 ERC2O15083 957 aa22.62■■□□□ 1.21
GABPB1-212ENST00000615671 HSP90AB2PQ58FF8 381 aa22.62■■□□□ 1.21
GABPB1-212ENST00000615671 RUNDC1Q96C34 613 aa22.61■■□□□ 1.21
GABPB1-212ENST00000615671 FSD1Q9BTV5 496 aa22.61■■□□□ 1.21
GABPB1-212ENST00000615671 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
GABPB1-212ENST00000615671 RBM5P52756 815 aaKnown RBP eCLIP22.61■■□□□ 1.21
GABPB1-212ENST00000615671 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
GABPB1-212ENST00000615671 ROCK1Q13464 1354 aa22.6■■□□□ 1.21
GABPB1-212ENST00000615671 BRMS1Q9HCU9 246 aa22.6■■□□□ 1.21
GABPB1-212ENST00000615671 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
GABPB1-212ENST00000615671 CNNM1Q9NRU3 951 aa22.58■■□□□ 1.21
GABPB1-212ENST00000615671 CADPSQ9ULU8 1353 aa22.58■■□□□ 1.21
GABPB1-212ENST00000615671 ZNF644Q9H582 1327 aaPredicted RBP22.58■■□□□ 1.21
GABPB1-212ENST00000615671 GNAI1P63096 354 aa22.58■■□□□ 1.2
GABPB1-212ENST00000615671 C1orf115Q9H7X2 142 aa22.57■■□□□ 1.2
GABPB1-212ENST00000615671 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
GABPB1-212ENST00000615671 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
GABPB1-212ENST00000615671 TTC39AQ5SRH9 613 aa22.56■■□□□ 1.2
GABPB1-212ENST00000615671 GPS2Q13227 327 aa22.55■■□□□ 1.2
GABPB1-212ENST00000615671 MAP4K4O95819 1239 aaPredicted RBP22.55■■□□□ 1.2
GABPB1-212ENST00000615671 SKOR2Q2VWA4 1001 aaPredicted RBP22.55■■□□□ 1.2
GABPB1-212ENST00000615671 CCDC73Q6ZRK6 1079 aa22.55■■□□□ 1.2
GABPB1-212ENST00000615671 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
GABPB1-212ENST00000615671 TBC1D2BQ9UPU7 963 aa22.55■■□□□ 1.2
GABPB1-212ENST00000615671 OFD1O75665 1012 aa22.55■■□□□ 1.2
GABPB1-212ENST00000615671 SIL1Q9H173 461 aa22.55■■□□□ 1.2
GABPB1-212ENST00000615671 ZNF771Q7L3S4 317 aaPredicted RBP22.54■■□□□ 1.2
GABPB1-212ENST00000615671 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
GABPB1-212ENST00000615671 MYL6BP14649 208 aa22.54■■□□□ 1.2
GABPB1-212ENST00000615671 CEBPZQ03701 1054 aaKnown RBP22.54■■□□□ 1.2
GABPB1-212ENST00000615671 WWC2Q6AWC2 1192 aa22.54■■□□□ 1.2
GABPB1-212ENST00000615671 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
GABPB1-212ENST00000615671 TOM1L2Q6ZVM7 507 aa22.53■■□□□ 1.2
GABPB1-212ENST00000615671 TXNDC2Q86VQ3 553 aa22.53■■□□□ 1.2
GABPB1-212ENST00000615671 HSP90AB4PQ58FF6 505 aa22.53■■□□□ 1.2
GABPB1-212ENST00000615671 XPCQ01831 940 aaPredicted RBP22.53■■□□□ 1.2
GABPB1-212ENST00000615671 BRPF1P55201 1214 aaPredicted RBP22.52■■□□□ 1.2
GABPB1-212ENST00000615671 CDK5RAP3Q96JB5 506 aa22.52■■□□□ 1.2
GABPB1-212ENST00000615671 SURF6O75683 361 aaKnown RBP22.52■■□□□ 1.19
GABPB1-212ENST00000615671 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
GABPB1-212ENST00000615671 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
GABPB1-212ENST00000615671 RUFY1Q96T51 708 aa22.51■■□□□ 1.19
GABPB1-212ENST00000615671 CNTROBQ8N137 903 aa22.51■■□□□ 1.19
GABPB1-212ENST00000615671 XBP1P17861 261 aa22.51■■□□□ 1.19
GABPB1-212ENST00000615671 KRT18P05783 430 aaKnown RBP22.5■■□□□ 1.19
GABPB1-212ENST00000615671 NINLQ9Y2I6 1382 aa22.5■■□□□ 1.19
GABPB1-212ENST00000615671 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
GABPB1-212ENST00000615671 CABP4P57796 275 aa22.5■■□□□ 1.19
GABPB1-212ENST00000615671 CAGE1Q8TC20 777 aa22.49■■□□□ 1.19
GABPB1-212ENST00000615671 ZHX3Q9H4I2 956 aa22.48■■□□□ 1.19
GABPB1-212ENST00000615671 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
GABPB1-212ENST00000615671 STK3Q13188 491 aa22.47■■□□□ 1.19
GABPB1-212ENST00000615671 HSP90AA2PQ14568 343 aaPredicted RBP22.47■■□□□ 1.19
GABPB1-212ENST00000615671 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
GABPB1-212ENST00000615671 CCDC30Q5VVM6 783 aa22.46■■□□□ 1.19
GABPB1-212ENST00000615671 MTHFSP49914 203 aa22.46■■□□□ 1.19
GABPB1-212ENST00000615671 PLEKHO1Q53GL0 409 aaPredicted RBP22.46■■□□□ 1.19
GABPB1-212ENST00000615671 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
GABPB1-212ENST00000615671 GSE1Q14687 1217 aa22.46■■□□□ 1.19
GABPB1-212ENST00000615671 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
GABPB1-212ENST00000615671 PIBF1Q8WXW3 757 aa22.45■■□□□ 1.18
GABPB1-212ENST00000615671 SDF4Q9BRK5 362 aa22.45■■□□□ 1.18
GABPB1-212ENST00000615671 PRAM1Q96QH2 718 aa22.44■■□□□ 1.18
GABPB1-212ENST00000615671 CCDC85AQ96PX6 553 aaPredicted RBP22.44■■□□□ 1.18
GABPB1-212ENST00000615671 SLC3A2P08195 630 aaKnown RBP22.44■■□□□ 1.18
GABPB1-212ENST00000615671 ZSCAN29Q8IWY8 852 aaPredicted RBP22.44■■□□□ 1.18
GABPB1-212ENST00000615671 RNF214Q8ND24 703 aa22.44■■□□□ 1.18
GABPB1-212ENST00000615671 C22orf23Q9BZE7 217 aa22.44■■□□□ 1.18
GABPB1-212ENST00000615671 WASHC2AQ641Q2 1341 aa22.44■■□□□ 1.18
GABPB1-212ENST00000615671 PRKAR2BP31323 418 aa22.43■■□□□ 1.18
GABPB1-212ENST00000615671 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms