RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PTPN23Q9H3S7 1636 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 CDR1P51861 262 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 BRMS1Q9HCU9 246 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 COG6Q9Y2V7 657 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 CCP110O43303 1012 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 SMC3Q9UQE7 1217 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 HIP1O00291 1037 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 CCAR2Q8N163 923 aaKnown RBP5.53□□□□□ -1.52
CHD9-221ENST00000615216 BICD2Q8TD16 824 aa5.53□□□□□ -1.52
CHD9-221ENST00000615216 NOM1Q5C9Z4 860 aaKnown RBP5.52□□□□□ -1.53
CHD9-221ENST00000615216 CCDC73Q6ZRK6 1079 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 VPS37DQ86XT2 251 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 PLIN1O60240 522 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 PCMTD1Q96MG8 357 aaPredicted RBP5.52□□□□□ -1.53
CHD9-221ENST00000615216 WASHC2AQ641Q2 1341 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 MINK1Q8N4C8 1332 aaPredicted RBP5.52□□□□□ -1.53
CHD9-221ENST00000615216 AMER1Q5JTC6 1135 aaPredicted RBP5.52□□□□□ -1.53
CHD9-221ENST00000615216 RAD54L2Q9Y4B4 1467 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 CTDP1Q9Y5B0 961 aaPredicted RBP5.52□□□□□ -1.53
CHD9-221ENST00000615216 MCM2P49736 904 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 NFXL1Q6ZNB6 911 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 C22orf23Q9BZE7 217 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 MRC2Q9UBG0 1479 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 ZNF771Q7L3S4 317 aaPredicted RBP5.52□□□□□ -1.53
CHD9-221ENST00000615216 CNTROBQ8N137 903 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 C9orf84Q5VXU9 1444 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 OLFM4Q6UX06 510 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 CTTNBP2Q8WZ74 1663 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 APAF1O14727 1248 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 ARAP1Q96P48 1450 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 BCL2L13Q9BXK5 485 aa5.52□□□□□ -1.53
CHD9-221ENST00000615216 FAM135AQ9P2D6 1515 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 RUFY1Q96T51 708 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 CCDC141Q6ZP82 1450 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 XBP1P17861 261 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 MYO6Q9UM54 1294 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 IGF1RP08069 1367 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 NCAPD3P42695 1498 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 APPP05067 770 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 HOMER1Q86YM7 354 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 MAP7D2Q96T17 732 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 CT47B1P0C2W7 299 aaPredicted RBP5.51□□□□□ -1.53
CHD9-221ENST00000615216 TSPYL4Q9UJ04 414 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 PSME1Q06323 249 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 IQGAP2Q13576 1575 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 IFT140Q96RY7 1462 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 FKBP5Q13451 457 aaPredicted RBP5.51□□□□□ -1.53
CHD9-221ENST00000615216 KIAA1107Q9UPP5 1409 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 ERC1Q8IUD2 1116 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 ZNF592Q92610 1267 aa5.51□□□□□ -1.53
CHD9-221ENST00000615216 MBD3O95983 291 aa5.5□□□□□ -1.53
CHD9-221ENST00000615216 DAPK1P53355 1430 aa5.5□□□□□ -1.53
CHD9-221ENST00000615216 RDXP35241 583 aaKnown RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 PDCP20941 246 aa5.5□□□□□ -1.53
CHD9-221ENST00000615216 RALYLQ86SE5 291 aaKnown RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 MRE11P49959 708 aa5.5□□□□□ -1.53
CHD9-221ENST00000615216 PCF11O94913 1555 aaKnown RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 EIF2S2P20042 333 aaKnown RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 NASPP49321 788 aaPredicted RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 FAM43AQ8N2R8 423 aa5.5□□□□□ -1.53
CHD9-221ENST00000615216 CCDC43Q96MW1 224 aaKnown RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 UBTFL1P0CB47 393 aaPredicted RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 ERCC4Q92889 916 aaPredicted RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 CWC15Q9P013 229 aaKnown RBP5.5□□□□□ -1.53
CHD9-221ENST00000615216 PDE4CQ08493 712 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 VPS37CA5D8V6 355 aaPredicted RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 EPS15P42566 896 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 RABEP1Q15276 862 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 KIF21AQ7Z4S6 1674 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 SART3Q15020 963 aaKnown RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 POLA1P09884 1462 aaPredicted RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 DHX16O60231 1041 aaKnown RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 MNS1Q8NEH6 495 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 UNC13AQ9UPW8 1703 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 GNAI3P08754 354 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 CCDC30Q5VVM6 783 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 GAS2L2Q8NHY3 880 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 CFTRP13569 1480 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 SLC3A2P08195 630 aaKnown RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 PIP4K2AP48426 406 aaPredicted RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 ZNF396Q96N95 335 aaPredicted RBP5.49□□□□□ -1.53
CHD9-221ENST00000615216 IFT57Q9NWB7 429 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 ERBINQ96RT1 1412 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 HSP90B2PQ58FF3 399 aa5.49□□□□□ -1.53
CHD9-221ENST00000615216 GPRASP1Q5JY77 1395 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 CCDC173Q0VFZ6 552 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 GCC1Q96CN9 775 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 ELL2O00472 640 aaPredicted RBP5.48□□□□□ -1.53
CHD9-221ENST00000615216 DCTN1Q14203 1278 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 TXLNBQ8N3L3 684 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 TSPY26PQ9H489 355 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 FOXD4L6Q3SYB3 417 aaPredicted RBP5.48□□□□□ -1.53
CHD9-221ENST00000615216 FOXD4L3Q6VB84 417 aaPredicted RBP5.48□□□□□ -1.53
CHD9-221ENST00000615216 SMARCE1Q969G3 411 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 PDE3AQ14432 1141 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 RIC3Q7Z5B4 369 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 CWC22Q9HCG8 908 aaKnown RBP5.48□□□□□ -1.53
CHD9-221ENST00000615216 NUTM2FA1L443 756 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 ANKRD1Q15327 319 aa5.48□□□□□ -1.53
CHD9-221ENST00000615216 RBM33Q96EV2 1170 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms