RNA–Protein interactions for RNA: ENST00000611739.4

EP400-207, Transcript of E1A binding protein p400, humanhuman

TSL 1 (best)

Gene EP400, Length 4,314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-207ENST00000611739 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
EP400-207ENST00000611739 EID1Q9Y6B2 187 aa12.71□□□□□ -0.37
EP400-207ENST00000611739 GOLGA6L6A8MZA4 724 aa12.71□□□□□ -0.37
EP400-207ENST00000611739 DISP3Q9P2K9 1392 aa12.71□□□□□ -0.38
EP400-207ENST00000611739 NRDCO43847 1150 aa12.7□□□□□ -0.38
EP400-207ENST00000611739 GPATCH3Q96I76 525 aa12.7□□□□□ -0.38
EP400-207ENST00000611739 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
EP400-207ENST00000611739 CDC45O75419 566 aa12.7□□□□□ -0.38
EP400-207ENST00000611739 INTS3Q68E01 1043 aaKnown RBP12.7□□□□□ -0.38
EP400-207ENST00000611739 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
EP400-207ENST00000611739 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
EP400-207ENST00000611739 MRE11P49959 708 aa12.69□□□□□ -0.38
EP400-207ENST00000611739 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
EP400-207ENST00000611739 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
EP400-207ENST00000611739 RARSP54136 660 aaKnown RBP12.69□□□□□ -0.38
EP400-207ENST00000611739 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
EP400-207ENST00000611739 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.68□□□□□ -0.38
EP400-207ENST00000611739 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
EP400-207ENST00000611739 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
EP400-207ENST00000611739 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
EP400-207ENST00000611739 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
EP400-207ENST00000611739 NUCB2P80303 420 aa12.68□□□□□ -0.38
EP400-207ENST00000611739 PHF14O94880 888 aa12.67□□□□□ -0.38
EP400-207ENST00000611739 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
EP400-207ENST00000611739 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
EP400-207ENST00000611739 PLEKHH2Q8IVE3 1493 aa12.67□□□□□ -0.38
EP400-207ENST00000611739 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
EP400-207ENST00000611739 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
EP400-207ENST00000611739 TEFQ10587 303 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 GPATCH8Q9UKJ3 1502 aaKnown RBP12.66□□□□□ -0.38
EP400-207ENST00000611739 FAM43AQ8N2R8 423 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 MCM4P33991 863 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
EP400-207ENST00000611739 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
EP400-207ENST00000611739 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
EP400-207ENST00000611739 IGHDP01880 384 aa12.65□□□□□ -0.38
EP400-207ENST00000611739 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
EP400-207ENST00000611739 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
EP400-207ENST00000611739 RNF214Q8ND24 703 aa12.65□□□□□ -0.38
EP400-207ENST00000611739 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.39
EP400-207ENST00000611739 GRIN2AQ12879 1464 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 TNNT3P45378 269 aaPredicted RBP12.64□□□□□ -0.39
EP400-207ENST00000611739 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
EP400-207ENST00000611739 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
EP400-207ENST00000611739 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 GNL2Q13823 731 aaKnown RBP12.64□□□□□ -0.39
EP400-207ENST00000611739 CDK19Q9BWU1 502 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 RAPGEF3O95398 923 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 CHD1LQ86WJ1 897 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
EP400-207ENST00000611739 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
EP400-207ENST00000611739 C9orf78Q9NZ63 289 aaPredicted RBP12.64□□□□□ -0.39
EP400-207ENST00000611739 LRPPRCP42704 1394 aaKnown RBP12.63□□□□□ -0.39
EP400-207ENST00000611739 NEK4P51957 841 aa12.63□□□□□ -0.39
EP400-207ENST00000611739 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
EP400-207ENST00000611739 NKTRP30414 1462 aaKnown RBP12.63□□□□□ -0.39
EP400-207ENST00000611739 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
EP400-207ENST00000611739 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
EP400-207ENST00000611739 TXNDC2Q86VQ3 553 aa12.62□□□□□ -0.39
EP400-207ENST00000611739 SULT6B1Q6IMI4 303 aa12.62□□□□□ -0.39
EP400-207ENST00000611739 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
EP400-207ENST00000611739 PRPF40AO75400 957 aaKnown RBP12.61□□□□□ -0.39
EP400-207ENST00000611739 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
EP400-207ENST00000611739 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
EP400-207ENST00000611739 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
EP400-207ENST00000611739 TESK2Q96S53 571 aa12.6□□□□□ -0.39
EP400-207ENST00000611739 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
EP400-207ENST00000611739 PARD3Q8TEW0 1356 aa12.6□□□□□ -0.39
EP400-207ENST00000611739 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
EP400-207ENST00000611739 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
EP400-207ENST00000611739 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
EP400-207ENST00000611739 RABEP1Q15276 862 aa12.59□□□□□ -0.39
EP400-207ENST00000611739 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
EP400-207ENST00000611739 IFIT2P09913 472 aaKnown RBP12.59□□□□□ -0.39
EP400-207ENST00000611739 K7ELQ4 463 aaPredicted RBP12.59□□□□□ -0.39
EP400-207ENST00000611739 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
EP400-207ENST00000611739 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
EP400-207ENST00000611739 H3BQV1 296 aa12.58□□□□□ -0.39
EP400-207ENST00000611739 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.39
EP400-207ENST00000611739 UBTFL1P0CB47 393 aaPredicted RBP12.58□□□□□ -0.39
EP400-207ENST00000611739 NLRP6P59044 892 aa12.58□□□□□ -0.39
EP400-207ENST00000611739 IFFO2Q5TF58 517 aa12.58□□□□□ -0.39
EP400-207ENST00000611739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
EP400-207ENST00000611739 TRIM27P14373 513 aa12.58□□□□□ -0.4
EP400-207ENST00000611739 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
EP400-207ENST00000611739 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
EP400-207ENST00000611739 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
EP400-207ENST00000611739 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
EP400-207ENST00000611739 FCHSD2O94868 740 aa12.58□□□□□ -0.4
EP400-207ENST00000611739 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
EP400-207ENST00000611739 SLC52A1Q9NWF4 448 aa12.57□□□□□ -0.4
EP400-207ENST00000611739 FAM184AQ8NB25 1140 aa12.57□□□□□ -0.4
EP400-207ENST00000611739 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
EP400-207ENST00000611739 SF3A1Q15459 793 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms