RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 NFXL1Q6ZNB6 911 aa19.05■□□□□ 0.64
TNXB-208ENST00000611016 TSR1Q2NL82 804 aaKnown RBP19.05■□□□□ 0.64
TNXB-208ENST00000611016 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
TNXB-208ENST00000611016 TPM1P09493 284 aa19.04■□□□□ 0.64
TNXB-208ENST00000611016 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
TNXB-208ENST00000611016 THEMISQ8N1K5 641 aaPredicted RBP19.03■□□□□ 0.64
TNXB-208ENST00000611016 ERICH2A1L162 156 aa19.03■□□□□ 0.64
TNXB-208ENST00000611016 FAM177BA6PVY3 158 aa19.03■□□□□ 0.64
TNXB-208ENST00000611016 ARID3AQ99856 593 aa19.03■□□□□ 0.64
TNXB-208ENST00000611016 DDX49Q9Y6V7 483 aaKnown RBP19.02■□□□□ 0.64
TNXB-208ENST00000611016 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
TNXB-208ENST00000611016 ERC2O15083 957 aa19.02■□□□□ 0.64
TNXB-208ENST00000611016 UBTFL1P0CB47 393 aaPredicted RBP19.02■□□□□ 0.64
TNXB-208ENST00000611016 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
TNXB-208ENST00000611016 WWC1Q8IX03 1113 aa19.02■□□□□ 0.63
TNXB-208ENST00000611016 A0A0U1RQG5 324 aaPredicted RBP19.01■□□□□ 0.63
TNXB-208ENST00000611016 FYB1O15117 783 aa19.01■□□□□ 0.63
TNXB-208ENST00000611016 CCDC27Q2M243 656 aa19.01■□□□□ 0.63
TNXB-208ENST00000611016 PLEKHO1Q53GL0 409 aaPredicted RBP19.01■□□□□ 0.63
TNXB-208ENST00000611016 GOLGA6L19H0YKK7 550 aa19.01■□□□□ 0.63
TNXB-208ENST00000611016 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
TNXB-208ENST00000611016 WASHC4Q2M389 1173 aa19■□□□□ 0.63
TNXB-208ENST00000611016 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
TNXB-208ENST00000611016 IFT140Q96RY7 1462 aa19■□□□□ 0.63
TNXB-208ENST00000611016 BECN2A8MW95 431 aa19■□□□□ 0.63
TNXB-208ENST00000611016 CCDC47Q96A33 483 aaKnown RBP19■□□□□ 0.63
TNXB-208ENST00000611016 LNPKQ9C0E8 428 aa19■□□□□ 0.63
TNXB-208ENST00000611016 CWC22Q9HCG8 908 aaKnown RBP19■□□□□ 0.63
TNXB-208ENST00000611016 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
TNXB-208ENST00000611016 CCDC70Q6NSX1 233 aa18.98■□□□□ 0.63
TNXB-208ENST00000611016 FANCIQ9NVI1 1328 aa18.98■□□□□ 0.63
TNXB-208ENST00000611016 PANK1Q8TE04 598 aa18.98■□□□□ 0.63
TNXB-208ENST00000611016 HOOK1Q9UJC3 728 aaKnown RBP18.98■□□□□ 0.63
TNXB-208ENST00000611016 CFTRP13569 1480 aa18.98■□□□□ 0.63
TNXB-208ENST00000611016 NUTM2BA6NNL0 878 aaPredicted RBP18.98■□□□□ 0.63
TNXB-208ENST00000611016 NUTM2EB1AL46 878 aaPredicted RBP18.98■□□□□ 0.63
TNXB-208ENST00000611016 INTS3Q68E01 1043 aaKnown RBP18.98■□□□□ 0.63
TNXB-208ENST00000611016 NUTM2AQ8IVF1 878 aaPredicted RBP18.98■□□□□ 0.63
TNXB-208ENST00000611016 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
TNXB-208ENST00000611016 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
TNXB-208ENST00000611016 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
TNXB-208ENST00000611016 RAPGEF3O95398 923 aa18.97■□□□□ 0.63
TNXB-208ENST00000611016 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
TNXB-208ENST00000611016 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
TNXB-208ENST00000611016 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
TNXB-208ENST00000611016 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
TNXB-208ENST00000611016 TATP17735 454 aaPredicted RBP18.96■□□□□ 0.63
TNXB-208ENST00000611016 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
TNXB-208ENST00000611016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.95■□□□□ 0.62
TNXB-208ENST00000611016 FOSBP53539 338 aa18.95■□□□□ 0.62
TNXB-208ENST00000611016 C9orf84Q5VXU9 1444 aa18.95■□□□□ 0.62
TNXB-208ENST00000611016 ANKRD20A12PQ8NF67 263 aa18.95■□□□□ 0.62
TNXB-208ENST00000611016 GPS2Q13227 327 aa18.95■□□□□ 0.62
TNXB-208ENST00000611016 RALYLQ86SE5 291 aaKnown RBP18.94■□□□□ 0.62
TNXB-208ENST00000611016 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
TNXB-208ENST00000611016 CABP1Q9NZU7 370 aa18.94■□□□□ 0.62
TNXB-208ENST00000611016 PCMTD1Q96MG8 357 aaPredicted RBP18.93■□□□□ 0.62
TNXB-208ENST00000611016 TNNT3P45378 269 aaPredicted RBP18.93■□□□□ 0.62
TNXB-208ENST00000611016 TOM1L2Q6ZVM7 507 aa18.93■□□□□ 0.62
TNXB-208ENST00000611016 VPS37CA5D8V6 355 aaPredicted RBP18.93■□□□□ 0.62
TNXB-208ENST00000611016 PPP2R1AP30153 589 aa18.93■□□□□ 0.62
TNXB-208ENST00000611016 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
TNXB-208ENST00000611016 SLC26A8Q96RN1 970 aa18.92■□□□□ 0.62
TNXB-208ENST00000611016 SLC12A5Q9H2X9 1139 aa18.92■□□□□ 0.62
TNXB-208ENST00000611016 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
TNXB-208ENST00000611016 BICD2Q8TD16 824 aa18.92■□□□□ 0.62
TNXB-208ENST00000611016 DDX54Q8TDD1 881 aaKnown RBP18.92■□□□□ 0.62
TNXB-208ENST00000611016 SMC3Q9UQE7 1217 aa18.92■□□□□ 0.62
TNXB-208ENST00000611016 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
TNXB-208ENST00000611016 CCDC43Q96MW1 224 aaKnown RBP18.91■□□□□ 0.62
TNXB-208ENST00000611016 SLC52A1Q9NWF4 448 aa18.91■□□□□ 0.62
TNXB-208ENST00000611016 MTMR7Q9Y216 660 aa18.91■□□□□ 0.62
TNXB-208ENST00000611016 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
TNXB-208ENST00000611016 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 ZNF692Q9BU19 519 aaPredicted RBP18.9■□□□□ 0.62
TNXB-208ENST00000611016 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 SURF6O75683 361 aaKnown RBP18.9■□□□□ 0.62
TNXB-208ENST00000611016 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 CHMP5Q9NZZ3 219 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 GNAI3P08754 354 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 CABP4P57796 275 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 NUCB2P80303 420 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 SAFBQ15424 915 aaKnown RBP eCLIP18.9■□□□□ 0.62
TNXB-208ENST00000611016 FSD1Q9BTV5 496 aa18.9■□□□□ 0.62
TNXB-208ENST00000611016 BRD4O60885 1362 aaPredicted RBP18.9■□□□□ 0.62
TNXB-208ENST00000611016 SULT6B1Q6IMI4 303 aa18.89■□□□□ 0.62
TNXB-208ENST00000611016 IPO7O95373 1038 aaKnown RBP18.89■□□□□ 0.61
TNXB-208ENST00000611016 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
TNXB-208ENST00000611016 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
TNXB-208ENST00000611016 TOPBP1Q92547 1522 aa18.88■□□□□ 0.61
TNXB-208ENST00000611016 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
TNXB-208ENST00000611016 TWISTNBQ3B726 338 aaPredicted RBP18.88■□□□□ 0.61
TNXB-208ENST00000611016 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
TNXB-208ENST00000611016 PPP1R1BQ9UD71 204 aaPredicted RBP18.88■□□□□ 0.61
TNXB-208ENST00000611016 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
TNXB-208ENST00000611016 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
TNXB-208ENST00000611016 PIP4K2BP78356 416 aa18.88■□□□□ 0.61
TNXB-208ENST00000611016 GSE1Q14687 1217 aa18.88■□□□□ 0.61
TNXB-208ENST00000611016 NINLQ9Y2I6 1382 aa18.88■□□□□ 0.61
TNXB-208ENST00000611016 CNTROBQ8N137 903 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms