RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 GRIPAP1Q4V328 841 aa7.28□□□□□ -1.24
AC004542.1-201ENST00000602955 CFAP70Q5T0N1 1121 aa7.28□□□□□ -1.24
AC004542.1-201ENST00000602955 USTQ9Y2C2 406 aa7.28□□□□□ -1.24
AC004542.1-201ENST00000602955 SLC4A3P48751 1232 aa7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 SRPK2P78362 688 aaKnown RBP7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 LRRN4Q8WUT4 740 aa7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 ALG2Q9H553 416 aa7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 VAC14Q08AM6 782 aa7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 SLF2Q8IX21 1173 aa7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 PPP1R12CQ9BZL4 782 aa7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 SOX11P35716 441 aa7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 FUT2Q10981 343 aa7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 SEPT9Q9UHD8 586 aaPredicted RBP7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 ARHGAP33O14559 1287 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 CFHP08603 1231 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 PSEN2P49810 448 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 TSC1Q92574 1164 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 BRD1O95696 1058 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 CSB-PGBD3P0DP91 1061 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 ATP6V1AP38606 617 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 EPS8L1Q8TE68 723 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 RFX1P22670 979 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 KCNA1Q09470 495 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 LAPTM4BQ86VI4 370 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 PRR7Q8TB68 274 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 UCN2Q96RP3 112 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 SAMD7Q7Z3H4 446 aa7.21□□□□□ -1.26
AC004542.1-201ENST00000602955 PBX2P40425 430 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 DESI1Q6ICB0 168 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 POTEEQ6S8J3 1075 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 RGS22Q8NE09 1264 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 SYMPKQ92797 1274 aaKnown RBP7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 TFIP11Q9UBB9 837 aaKnown RBP7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 VPS9D1Q9Y2B5 631 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 PER1O15534 1290 aaPredicted RBP7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 LMOD1P29536 600 aaPredicted RBP7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 NR6A1Q15406 480 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 KMT5BQ4FZB7 885 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 MORN1Q5T089 497 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 DMRTA1Q5VZB9 504 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 ATG7O95352 703 aa7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 Q3C1V9 767 aa7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 ACTN4O43707 911 aaKnown RBP7.17□□□□□ -1.26
AC004542.1-201ENST00000602955 EIF4G2P78344 907 aaKnown RBP eCLIP7.17□□□□□ -1.26
AC004542.1-201ENST00000602955 NBPF3Q9H094 633 aa7.17□□□□□ -1.26
AC004542.1-201ENST00000602955 NR1H3Q13133 447 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 VARS2Q5ST30 1063 aaKnown RBP7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 LYPD8Q6UX82 237 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 SLC27A5Q9Y2P5 690 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 ERBB3P21860 1342 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 BHMG1C9JSJ3 638 aaPredicted RBP7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 ATP9BO43861 1147 aa7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 ZFRQ96KR1 1074 aaKnown RBP7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 MTMR7Q9Y216 660 aa7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 AXIN2Q9Y2T1 843 aa7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 RNF40O75150 1001 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 TBC1D9Q6ZT07 1266 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 NFATC2IPQ8NCF5 419 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 VRTNQ9H8Y1 702 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
AC004542.1-201ENST00000602955 PRR14Q9BWN1 585 aa7.13□□□□□ -1.27
AC004542.1-201ENST00000602955 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
AC004542.1-201ENST00000602955 ZC3H4Q9UPT8 1303 aaKnown RBP7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 TK2O00142 265 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 FBXO45P0C2W1 286 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 LRCH3Q96II8 777 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 FKBPLQ9UIM3 349 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 ZBBXA8MT70 800 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 CDCA8Q53HL2 280 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 RNF19BQ6ZMZ0 732 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 ZNF687Q8N1G0 1237 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 USB1Q9BQ65 265 aaKnown RBP7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 BLOC1S3Q6QNY0 202 aa7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 MRPL50Q8N5N7 158 aaKnown RBP7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
AC004542.1-201ENST00000602955 PLEKHM2Q8IWE5 1019 aa7.09□□□□□ -1.27
AC004542.1-201ENST00000602955 OTUD5Q96G74 571 aa7.09□□□□□ -1.27
AC004542.1-201ENST00000602955 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 PTPRNQ16849 979 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms