RNA–Protein interactions for RNA: ENST00000602847.1

AC004542.2-201, humanhuman

TSL 3 BASIC

Gene AC004542.2, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.2-201ENST00000602847 PCDHGC3Q9UN70 934 aa7.53□□□□□ -1.2
AC004542.2-201ENST00000602847 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
AC004542.2-201ENST00000602847 ATP6V1AP38606 617 aa7.52□□□□□ -1.21
AC004542.2-201ENST00000602847 FBXO31Q5XUX0 539 aaPredicted RBP7.52□□□□□ -1.21
AC004542.2-201ENST00000602847 SLC27A5Q9Y2P5 690 aa7.52□□□□□ -1.21
AC004542.2-201ENST00000602847 PCDHB3Q9Y5E6 796 aa7.52□□□□□ -1.21
AC004542.2-201ENST00000602847 COPS2P61201 443 aa7.51□□□□□ -1.21
AC004542.2-201ENST00000602847 SCUBE3Q8IX30 993 aa7.51□□□□□ -1.21
AC004542.2-201ENST00000602847 THAP11Q96EK4 314 aa7.51□□□□□ -1.21
AC004542.2-201ENST00000602847 LIMD1Q9UGP4 676 aa7.51□□□□□ -1.21
AC004542.2-201ENST00000602847 USP46P62068 366 aa7.5□□□□□ -1.21
AC004542.2-201ENST00000602847 DDRGK1Q96HY6 314 aa7.5□□□□□ -1.21
AC004542.2-201ENST00000602847 PRR14Q9BWN1 585 aa7.5□□□□□ -1.21
AC004542.2-201ENST00000602847 PCDHB15Q9Y5E8 787 aa7.5□□□□□ -1.21
AC004542.2-201ENST00000602847 SPTLC1O15269 473 aa7.49□□□□□ -1.21
AC004542.2-201ENST00000602847 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
AC004542.2-201ENST00000602847 NUTM1Q86Y26 1132 aa7.49□□□□□ -1.21
AC004542.2-201ENST00000602847 NKX2-3Q8TAU0 364 aa7.49□□□□□ -1.21
AC004542.2-201ENST00000602847 TLL1O43897 1013 aa7.48□□□□□ -1.21
AC004542.2-201ENST00000602847 ZPR1O75312 459 aa7.48□□□□□ -1.21
AC004542.2-201ENST00000602847 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
AC004542.2-201ENST00000602847 PROCA1Q8NCQ7 364 aaPredicted RBP7.48□□□□□ -1.21
AC004542.2-201ENST00000602847 ARAP1Q96P48 1450 aa7.48□□□□□ -1.21
AC004542.2-201ENST00000602847 BAZ1BQ9UIG0 1483 aaKnown RBP7.48□□□□□ -1.21
AC004542.2-201ENST00000602847 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
AC004542.2-201ENST00000602847 BRICD5Q6PL45 260 aa7.47□□□□□ -1.21
AC004542.2-201ENST00000602847 SYMPKQ92797 1274 aaKnown RBP7.47□□□□□ -1.21
AC004542.2-201ENST00000602847 IL21Q9HBE4 155 aa7.47□□□□□ -1.21
AC004542.2-201ENST00000602847 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
AC004542.2-201ENST00000602847 FDX1P10109 184 aa7.46□□□□□ -1.22
AC004542.2-201ENST00000602847 GJA5P36382 358 aa7.46□□□□□ -1.22
AC004542.2-201ENST00000602847 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
AC004542.2-201ENST00000602847 RIC3Q7Z5B4 369 aa7.46□□□□□ -1.22
AC004542.2-201ENST00000602847 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.46□□□□□ -1.22
AC004542.2-201ENST00000602847 QPCTQ16769 361 aa7.45□□□□□ -1.22
AC004542.2-201ENST00000602847 FAM160A2Q8N612 972 aaPredicted RBP7.45□□□□□ -1.22
AC004542.2-201ENST00000602847 SALL2Q9Y467 1007 aaPredicted RBP7.45□□□□□ -1.22
AC004542.2-201ENST00000602847 NR1I2O75469 434 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 KCNC4Q03721 635 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 TUSC1Q2TAM9 212 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 IFFO2Q5TF58 517 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 CABLES1Q8TDN4 633 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 CADPSQ9ULU8 1353 aa7.44□□□□□ -1.22
AC004542.2-201ENST00000602847 SMARCA4P51532 1647 aa7.43□□□□□ -1.22
AC004542.2-201ENST00000602847 LILRB3O75022 631 aa7.43□□□□□ -1.22
AC004542.2-201ENST00000602847 CLK2P49760 499 aaKnown RBP7.43□□□□□ -1.22
AC004542.2-201ENST00000602847 DIXDC1Q155Q3 683 aa7.43□□□□□ -1.22
AC004542.2-201ENST00000602847 RSPH6AQ9H0K4 717 aa7.43□□□□□ -1.22
AC004542.2-201ENST00000602847 HRCP23327 699 aa7.42□□□□□ -1.22
AC004542.2-201ENST00000602847 GRIPAP1Q4V328 841 aa7.42□□□□□ -1.22
AC004542.2-201ENST00000602847 ADH1BP00325 375 aa7.41□□□□□ -1.22
AC004542.2-201ENST00000602847 RTL5Q5HYW3 569 aaPredicted RBP7.41□□□□□ -1.22
AC004542.2-201ENST00000602847 SPSB2Q99619 263 aa7.41□□□□□ -1.22
AC004542.2-201ENST00000602847 PRDM9Q9NQV7 894 aa7.41□□□□□ -1.22
AC004542.2-201ENST00000602847 CEP164Q9UPV0 1460 aa7.41□□□□□ -1.22
AC004542.2-201ENST00000602847 CSPP1Q1MSJ5 1256 aa7.4□□□□□ -1.22
AC004542.2-201ENST00000602847 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
AC004542.2-201ENST00000602847 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
AC004542.2-201ENST00000602847 PRPF38BQ5VTL8 546 aaKnown RBP7.39□□□□□ -1.23
AC004542.2-201ENST00000602847 S1PR4O95977 384 aa7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 MTMR2Q13614 643 aa7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 Q3C1V9 767 aa7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 MSS51Q4VC12 460 aa7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 PPP2R2DQ66LE6 453 aa7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 RETREG3Q86VR2 466 aa7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
AC004542.2-201ENST00000602847 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
AC004542.2-201ENST00000602847 C6orf229H3BNL8 230 aa7.37□□□□□ -1.23
AC004542.2-201ENST00000602847 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
AC004542.2-201ENST00000602847 PPP1R18Q6NYC8 613 aa7.37□□□□□ -1.23
AC004542.2-201ENST00000602847 EMID1Q96A84 441 aaPredicted RBP7.37□□□□□ -1.23
AC004542.2-201ENST00000602847 PEG3Q9GZU2 1588 aa7.37□□□□□ -1.23
AC004542.2-201ENST00000602847 A0A0G2JS52 829 aa7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 PPEF1O14829 653 aaPredicted RBP7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 RGS20O76081 388 aa7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 DXOO77932 396 aaKnown RBP7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 MMP16P51512 607 aa7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 PRR7Q8TB68 274 aa7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 ZBTB3Q9H5J0 574 aa7.36□□□□□ -1.23
AC004542.2-201ENST00000602847 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
AC004542.2-201ENST00000602847 SLC6A16Q9GZN6 736 aa7.35□□□□□ -1.23
AC004542.2-201ENST00000602847 FANCD2Q9BXW9 1451 aa7.35□□□□□ -1.23
AC004542.2-201ENST00000602847 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
AC004542.2-201ENST00000602847 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
AC004542.2-201ENST00000602847 PCMTD1Q96MG8 357 aaPredicted RBP7.34□□□□□ -1.23
AC004542.2-201ENST00000602847 ZNF608Q9ULD9 1512 aaPredicted RBP7.33□□□□□ -1.24
AC004542.2-201ENST00000602847 CHD1O14646 1710 aa7.33□□□□□ -1.24
AC004542.2-201ENST00000602847 SPDYE5A6NIY4 337 aa7.33□□□□□ -1.24
AC004542.2-201ENST00000602847 JUNDP17535 347 aa7.33□□□□□ -1.24
AC004542.2-201ENST00000602847 RFC5P40937 340 aa7.33□□□□□ -1.24
AC004542.2-201ENST00000602847 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
AC004542.2-201ENST00000602847 URB2Q14146 1524 aaKnown RBP7.32□□□□□ -1.24
AC004542.2-201ENST00000602847 DESI1Q6ICB0 168 aa7.32□□□□□ -1.24
AC004542.2-201ENST00000602847 NUTM2BA6NNL0 878 aaPredicted RBP7.31□□□□□ -1.24
AC004542.2-201ENST00000602847 NUTM2EB1AL46 878 aaPredicted RBP7.31□□□□□ -1.24
AC004542.2-201ENST00000602847 CTDSPL2Q05D32 466 aa7.31□□□□□ -1.24
AC004542.2-201ENST00000602847 NUTM2DQ5VT03 806 aaPredicted RBP7.31□□□□□ -1.24
AC004542.2-201ENST00000602847 LYPD8Q6UX82 237 aa7.31□□□□□ -1.24
AC004542.2-201ENST00000602847 NUTM2AQ8IVF1 878 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms