RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 SHANK2Q9UPX8 1470 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 INO80Q9ULG1 1556 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-202ENST00000594814 MROH1Q8NDA8 1641 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 TESPA1A2RU30 521 aaPredicted RBP5.64□□□□□ -1.51
LRIT3-202ENST00000594814 NUP155O75694 1391 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 ABCA6Q8N139 1617 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 STAC3Q96MF2 364 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 ANKRD30AQ9BXX3 1397 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 PNNQ9H307 717 aaKnown RBP5.64□□□□□ -1.51
LRIT3-202ENST00000594814 VIRMAQ69YN4 1812 aaKnown RBP5.64□□□□□ -1.51
LRIT3-202ENST00000594814 DDX10Q13206 875 aaKnown RBP5.63□□□□□ -1.51
LRIT3-202ENST00000594814 PDE3BQ13370 1112 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.63□□□□□ -1.51
LRIT3-202ENST00000594814 RICTORQ6R327 1708 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 ARAP3Q8WWN8 1544 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 SETQ01105 290 aaPredicted RBP5.63□□□□□ -1.51
LRIT3-202ENST00000594814 NBPF8Q3BBV2 869 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 FOXD4L5Q5VV16 416 aaPredicted RBP5.63□□□□□ -1.51
LRIT3-202ENST00000594814 CACTIN-AS1Q8N1I8 211 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
LRIT3-202ENST00000594814 FER1L4A9Z1Z3 1794 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 MAST1Q9Y2H9 1570 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 ZBTB7CA1YPR0 619 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 PRDM10Q9NQV6 1147 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 KDM5CP41229 1560 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 ATP7AQ04656 1500 aa5.63□□□□□ -1.51
LRIT3-202ENST00000594814 ANP32BQ92688 251 aaKnown RBP5.62□□□□□ -1.51
LRIT3-202ENST00000594814 SPATA31D1Q6ZQQ2 1576 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 UGGT1Q9NYU2 1555 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 KIF3BO15066 747 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 MAPK8IP2Q13387 824 aaPredicted RBP5.62□□□□□ -1.51
LRIT3-202ENST00000594814 SDR16C5Q8N3Y7 309 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 GOLGA6L3A6NEY3 463 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 NFKBIBQ15653 356 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 ILDR1Q86SU0 546 aaPredicted RBP5.62□□□□□ -1.51
LRIT3-202ENST00000594814 L3MBTL2Q969R5 705 aa5.62□□□□□ -1.51
LRIT3-202ENST00000594814 NAP1L5Q96NT1 182 aaPredicted RBP5.62□□□□□ -1.51
LRIT3-202ENST00000594814 ROCK2O75116 1388 aaKnown RBP5.62□□□□□ -1.51
LRIT3-202ENST00000594814 FAM135AQ9P2D6 1515 aa5.61□□□□□ -1.51
LRIT3-202ENST00000594814 PLXNC1O60486 1568 aa5.61□□□□□ -1.51
LRIT3-202ENST00000594814 FNBP4Q8N3X1 1017 aaPredicted RBP5.61□□□□□ -1.51
LRIT3-202ENST00000594814 KCTD17Q8N5Z5 321 aa5.61□□□□□ -1.51
LRIT3-202ENST00000594814 DNAJC2Q99543 621 aaKnown RBP5.61□□□□□ -1.51
LRIT3-202ENST00000594814 MCCD1P59942 119 aaPredicted RBP5.61□□□□□ -1.51
LRIT3-202ENST00000594814 GGT6Q6P531 493 aa5.61□□□□□ -1.51
LRIT3-202ENST00000594814 EXOC8Q8IYI6 725 aa5.61□□□□□ -1.51
LRIT3-202ENST00000594814 TONSLQ96HA7 1378 aa5.61□□□□□ -1.51
LRIT3-202ENST00000594814 BCORL1Q5H9F3 1711 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 DIP2CQ9Y2E4 1556 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 DHX29Q7Z478 1369 aaKnown RBP5.6□□□□□ -1.51
LRIT3-202ENST00000594814 PDE4AP27815 886 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 FBXO31Q5XUX0 539 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-202ENST00000594814 FBXO41Q8TF61 875 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 ZNF518AQ6AHZ1 1483 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 RTEL1-TNFRSF6BF6WH68 1400 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 FRAT1Q92837 279 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-202ENST00000594814 IBTKQ9P2D0 1353 aaPredicted RBP5.6□□□□□ -1.51
LRIT3-202ENST00000594814 MAGI2Q86UL8 1455 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 MLH3Q9UHC1 1453 aa5.6□□□□□ -1.51
LRIT3-202ENST00000594814 A2MP01023 1474 aa5.59□□□□□ -1.51
LRIT3-202ENST00000594814 NEO1Q92859 1461 aa5.59□□□□□ -1.51
LRIT3-202ENST00000594814 DUOX2Q9NRD8 1548 aa5.59□□□□□ -1.51
LRIT3-202ENST00000594814 HS1BP3Q53T59 392 aa5.59□□□□□ -1.51
LRIT3-202ENST00000594814 E9PCH4 1651 aa5.59□□□□□ -1.52
LRIT3-202ENST00000594814 UNC13BO14795 1591 aa5.59□□□□□ -1.52
LRIT3-202ENST00000594814 ATXN8OSP0DMR3 200 aa5.59□□□□□ -1.52
LRIT3-202ENST00000594814 MLECQ14165 292 aa5.59□□□□□ -1.52
LRIT3-202ENST00000594814 TRIM44Q96DX7 344 aaPredicted RBP5.59□□□□□ -1.52
LRIT3-202ENST00000594814 SPATA32Q96LK8 384 aa5.59□□□□□ -1.52
LRIT3-202ENST00000594814 TEX14Q8IWB6 1497 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 EIF3AQ14152 1382 aaKnown RBP5.58□□□□□ -1.52
LRIT3-202ENST00000594814 PRDM15P57071 1507 aaPredicted RBP5.58□□□□□ -1.52
LRIT3-202ENST00000594814 TNNT2P45379 298 aaPredicted RBP5.58□□□□□ -1.52
LRIT3-202ENST00000594814 QTRT2Q9H974 415 aaKnown RBP5.58□□□□□ -1.52
LRIT3-202ENST00000594814 VWDEQ8N2E2 1590 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 KDM5DQ9BY66 1539 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 KIF20AO95235 890 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 BRD1O95696 1058 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 MRE11P49959 708 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 MFAP1P55081 439 aaKnown RBP5.58□□□□□ -1.52
LRIT3-202ENST00000594814 RGL3Q3MIN7 710 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 B4GALNT3Q6L9W6 998 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 REREQ9P2R6 1566 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 LAS1LQ9Y4W2 734 aaKnown RBP5.58□□□□□ -1.52
LRIT3-202ENST00000594814 DEPDC5O75140 1603 aa5.58□□□□□ -1.52
LRIT3-202ENST00000594814 ERBINQ96RT1 1412 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 FSD2A1L4K1 749 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 PPFIA4O75335 1185 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 BECN1Q14457 450 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 CCDC96Q2M329 555 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 CLEC4GQ6UXB4 293 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 FTSJ3Q8IY81 847 aaKnown RBP5.57□□□□□ -1.52
LRIT3-202ENST00000594814 NUTM2DQ5VT03 806 aaPredicted RBP5.57□□□□□ -1.52
LRIT3-202ENST00000594814 ATP10AO60312 1499 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 RPRD2Q5VT52 1461 aaKnown RBP5.57□□□□□ -1.52
LRIT3-202ENST00000594814 CEBPAP49715 358 aaPredicted RBP5.57□□□□□ -1.52
LRIT3-202ENST00000594814 PPP4CP60510 307 aa5.57□□□□□ -1.52
LRIT3-202ENST00000594814 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.57□□□□□ -1.52
LRIT3-202ENST00000594814 GTPBP4Q9BZE4 634 aaKnown RBP5.57□□□□□ -1.52
LRIT3-202ENST00000594814 IQGAP3Q86VI3 1631 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms