RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ATF3P18847 181 aa14.17□□□□□ -0.14
APOC1-201ENST00000586638 MEX3CQ5U5Q3 659 aaKnown RBP14.17□□□□□ -0.14
APOC1-201ENST00000586638 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
APOC1-201ENST00000586638 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
APOC1-201ENST00000586638 SETD1AO15047 1707 aaKnown RBP14.17□□□□□ -0.14
APOC1-201ENST00000586638 NCOA3Q9Y6Q9 1424 aa14.16□□□□□ -0.14
APOC1-201ENST00000586638 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
APOC1-201ENST00000586638 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
APOC1-201ENST00000586638 EIF3AQ14152 1382 aaKnown RBP14.15□□□□□ -0.14
APOC1-201ENST00000586638 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
APOC1-201ENST00000586638 NWD1Q149M9 1564 aa14.14□□□□□ -0.15
APOC1-201ENST00000586638 MYOM1P52179 1685 aa14.14□□□□□ -0.15
APOC1-201ENST00000586638 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
APOC1-201ENST00000586638 TESK2Q96S53 571 aa14.13□□□□□ -0.15
APOC1-201ENST00000586638 AMOTL2Q9Y2J4 779 aa14.13□□□□□ -0.15
APOC1-201ENST00000586638 PHLPP1O60346 1717 aa14.11□□□□□ -0.15
APOC1-201ENST00000586638 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
APOC1-201ENST00000586638 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
APOC1-201ENST00000586638 PIK3R4Q99570 1358 aa14.1□□□□□ -0.15
APOC1-201ENST00000586638 NUTM2BA6NNL0 878 aaPredicted RBP14.1□□□□□ -0.15
APOC1-201ENST00000586638 NUTM2EB1AL46 878 aaPredicted RBP14.1□□□□□ -0.15
APOC1-201ENST00000586638 RXRBP28702 533 aa14.1□□□□□ -0.15
APOC1-201ENST00000586638 NUTM2AQ8IVF1 878 aaPredicted RBP14.1□□□□□ -0.15
APOC1-201ENST00000586638 ADAMTS13Q76LX8 1427 aa14.09□□□□□ -0.15
APOC1-201ENST00000586638 ANP32CO43423 234 aa14.09□□□□□ -0.15
APOC1-201ENST00000586638 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
APOC1-201ENST00000586638 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.15
APOC1-201ENST00000586638 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
APOC1-201ENST00000586638 TMF1P82094 1093 aa14.07□□□□□ -0.16
APOC1-201ENST00000586638 KNDC1Q76NI1 1749 aa14.07□□□□□ -0.16
APOC1-201ENST00000586638 TRAK1Q9UPV9 953 aa14.06□□□□□ -0.16
APOC1-201ENST00000586638 LRP6O75581 1613 aa14.05□□□□□ -0.16
APOC1-201ENST00000586638 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
APOC1-201ENST00000586638 LRRC59Q96AG4 307 aaKnown RBP14.05□□□□□ -0.16
APOC1-201ENST00000586638 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
APOC1-201ENST00000586638 YTHDC2Q9H6S0 1430 aaKnown RBP14.05□□□□□ -0.16
APOC1-201ENST00000586638 TULP4Q9NRJ4 1543 aa14.05□□□□□ -0.16
APOC1-201ENST00000586638 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
APOC1-201ENST00000586638 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
APOC1-201ENST00000586638 PTPRUQ92729 1446 aa14.04□□□□□ -0.16
APOC1-201ENST00000586638 DLC1Q96QB1 1528 aa14.02□□□□□ -0.16
APOC1-201ENST00000586638 AFF2P51816 1311 aa14.02□□□□□ -0.17
APOC1-201ENST00000586638 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
APOC1-201ENST00000586638 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
APOC1-201ENST00000586638 DIP2AQ14689 1571 aa14.01□□□□□ -0.17
APOC1-201ENST00000586638 QTRT2Q9H974 415 aaKnown RBP14.01□□□□□ -0.17
APOC1-201ENST00000586638 STK26Q9P289 416 aa14.01□□□□□ -0.17
APOC1-201ENST00000586638 DDX17Q92841 729 aaKnown RBP14□□□□□ -0.17
APOC1-201ENST00000586638 C8orf37Q96NL8 207 aa14□□□□□ -0.17
APOC1-201ENST00000586638 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
APOC1-201ENST00000586638 CCER2I3L3R5 266 aa13.99□□□□□ -0.17
APOC1-201ENST00000586638 DCCP43146 1447 aa13.98□□□□□ -0.17
APOC1-201ENST00000586638 METP08581 1390 aa13.98□□□□□ -0.17
APOC1-201ENST00000586638 RBM6P78332 1123 aaKnown RBP13.98□□□□□ -0.17
APOC1-201ENST00000586638 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
APOC1-201ENST00000586638 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
APOC1-201ENST00000586638 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
APOC1-201ENST00000586638 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
APOC1-201ENST00000586638 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
APOC1-201ENST00000586638 MST1RQ04912 1400 aa13.97□□□□□ -0.17
APOC1-201ENST00000586638 SHPRHQ149N8 1683 aa13.96□□□□□ -0.17
APOC1-201ENST00000586638 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
APOC1-201ENST00000586638 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
APOC1-201ENST00000586638 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
APOC1-201ENST00000586638 TECPR2O15040 1411 aa13.94□□□□□ -0.18
APOC1-201ENST00000586638 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
APOC1-201ENST00000586638 PANK3Q9H999 370 aa13.94□□□□□ -0.18
APOC1-201ENST00000586638 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
APOC1-201ENST00000586638 XRN1Q8IZH2 1706 aaKnown RBP13.93□□□□□ -0.18
APOC1-201ENST00000586638 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
APOC1-201ENST00000586638 ORAI2Q96SN7 254 aa13.92□□□□□ -0.18
APOC1-201ENST00000586638 POGKQ9P215 609 aa13.92□□□□□ -0.18
APOC1-201ENST00000586638 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
APOC1-201ENST00000586638 ABCC11Q96J66 1382 aa13.92□□□□□ -0.18
APOC1-201ENST00000586638 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
APOC1-201ENST00000586638 ADGRL3Q9HAR2 1447 aa13.91□□□□□ -0.18
APOC1-201ENST00000586638 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
APOC1-201ENST00000586638 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
APOC1-201ENST00000586638 USP21Q9UK80 565 aa13.91□□□□□ -0.18
APOC1-201ENST00000586638 USP32Q8NFA0 1604 aa13.9□□□□□ -0.18
APOC1-201ENST00000586638 PARD3Q8TEW0 1356 aa13.9□□□□□ -0.18
APOC1-201ENST00000586638 ADGRB2O60241 1585 aa13.89□□□□□ -0.19
APOC1-201ENST00000586638 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
APOC1-201ENST00000586638 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
APOC1-201ENST00000586638 TRPC5Q9UL62 973 aaPredicted RBP13.89□□□□□ -0.19
APOC1-201ENST00000586638 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
APOC1-201ENST00000586638 ROBO2Q9HCK4 1378 aa13.88□□□□□ -0.19
APOC1-201ENST00000586638 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
APOC1-201ENST00000586638 RGS12O14924 1447 aa13.88□□□□□ -0.19
APOC1-201ENST00000586638 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
APOC1-201ENST00000586638 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
APOC1-201ENST00000586638 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
APOC1-201ENST00000586638 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
APOC1-201ENST00000586638 CC2D1BQ5T0F9 858 aaKnown RBP13.86□□□□□ -0.19
APOC1-201ENST00000586638 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
APOC1-201ENST00000586638 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
APOC1-201ENST00000586638 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
APOC1-201ENST00000586638 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
APOC1-201ENST00000586638 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
APOC1-201ENST00000586638 PTCH1Q13635 1447 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms