RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
PRKCSH-202ENST00000585540 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
PRKCSH-202ENST00000585540 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
PRKCSH-202ENST00000585540 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
PRKCSH-202ENST00000585540 HSPA1LP34931 641 aa19.81■□□□□ 0.76
PRKCSH-202ENST00000585540 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
PRKCSH-202ENST00000585540 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
PRKCSH-202ENST00000585540 POGKQ9P215 609 aa19.79■□□□□ 0.76
PRKCSH-202ENST00000585540 NHSL1Q5SYE7 1610 aa19.78■□□□□ 0.76
PRKCSH-202ENST00000585540 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
PRKCSH-202ENST00000585540 PHLPP1O60346 1717 aa19.78■□□□□ 0.76
PRKCSH-202ENST00000585540 PLEKHH1Q9ULM0 1364 aa19.78■□□□□ 0.76
PRKCSH-202ENST00000585540 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
PRKCSH-202ENST00000585540 BRINP3Q76B58 766 aa19.77■□□□□ 0.76
PRKCSH-202ENST00000585540 WAPLQ7Z5K2 1190 aa19.77■□□□□ 0.76
PRKCSH-202ENST00000585540 TRAK1Q9UPV9 953 aa19.77■□□□□ 0.76
PRKCSH-202ENST00000585540 GPRASP1Q5JY77 1395 aa19.76■□□□□ 0.75
PRKCSH-202ENST00000585540 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
PRKCSH-202ENST00000585540 COL16A1Q07092 1604 aaPredicted RBP19.75■□□□□ 0.75
PRKCSH-202ENST00000585540 RALGAPBQ86X10 1494 aa19.74■□□□□ 0.75
PRKCSH-202ENST00000585540 ROCK2O75116 1388 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-202ENST00000585540 JCADQ9P266 1359 aa19.72■□□□□ 0.75
PRKCSH-202ENST00000585540 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
PRKCSH-202ENST00000585540 SHPRHQ149N8 1683 aa19.69■□□□□ 0.74
PRKCSH-202ENST00000585540 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
PRKCSH-202ENST00000585540 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
PRKCSH-202ENST00000585540 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PRKCSH-202ENST00000585540 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
PRKCSH-202ENST00000585540 ITSN1Q15811 1721 aa19.68■□□□□ 0.74
PRKCSH-202ENST00000585540 WASLO00401 505 aaPredicted RBP19.66■□□□□ 0.74
PRKCSH-202ENST00000585540 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
PRKCSH-202ENST00000585540 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 SAFB2Q14151 953 aaKnown RBP eCLIP19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 SOS2Q07890 1332 aaPredicted RBP19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 SPATA31A6Q5VVP1 1343 aa19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 SBNO2Q9Y2G9 1366 aa19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 MED1Q15648 1581 aaPredicted RBP19.65■□□□□ 0.74
PRKCSH-202ENST00000585540 NBPF8Q3BBV2 869 aa19.64■□□□□ 0.73
PRKCSH-202ENST00000585540 MINK1Q8N4C8 1332 aaPredicted RBP19.64■□□□□ 0.73
PRKCSH-202ENST00000585540 SLC24A1O60721 1099 aa19.63■□□□□ 0.73
PRKCSH-202ENST00000585540 ORAI2Q96SN7 254 aa19.63■□□□□ 0.73
PRKCSH-202ENST00000585540 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
PRKCSH-202ENST00000585540 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
PRKCSH-202ENST00000585540 DISP3Q9P2K9 1392 aa19.61■□□□□ 0.73
PRKCSH-202ENST00000585540 ILDR2Q71H61 639 aa19.61■□□□□ 0.73
PRKCSH-202ENST00000585540 ATP7BP35670 1465 aa19.6■□□□□ 0.73
PRKCSH-202ENST00000585540 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
PRKCSH-202ENST00000585540 PXDNQ92626 1479 aa19.6■□□□□ 0.73
PRKCSH-202ENST00000585540 RGPD8O14715 1765 aaPredicted RBP19.59■□□□□ 0.73
PRKCSH-202ENST00000585540 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
PRKCSH-202ENST00000585540 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-202ENST00000585540 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-202ENST00000585540 EVC2Q86UK5 1308 aa19.57■□□□□ 0.72
PRKCSH-202ENST00000585540 PSME1Q06323 249 aa19.57■□□□□ 0.72
PRKCSH-202ENST00000585540 SBNO1A3KN83 1393 aa19.56■□□□□ 0.72
PRKCSH-202ENST00000585540 PNPLA6Q8IY17 1366 aa19.56■□□□□ 0.72
PRKCSH-202ENST00000585540 NUTM2FA1L443 756 aa19.55■□□□□ 0.72
PRKCSH-202ENST00000585540 SOCS7O14512 581 aa19.55■□□□□ 0.72
PRKCSH-202ENST00000585540 CDK19Q9BWU1 502 aa19.55■□□□□ 0.72
PRKCSH-202ENST00000585540 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
PRKCSH-202ENST00000585540 FOXO3O43524 673 aa19.54■□□□□ 0.72
PRKCSH-202ENST00000585540 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-202ENST00000585540 PRR36Q9H6K5 1346 aa19.53■□□□□ 0.72
PRKCSH-202ENST00000585540 NUDT16Q96DE0 195 aaKnown RBP19.53■□□□□ 0.72
PRKCSH-202ENST00000585540 ATAD2Q6PL18 1390 aa19.53■□□□□ 0.72
PRKCSH-202ENST00000585540 TNS3Q68CZ2 1445 aa19.52■□□□□ 0.72
PRKCSH-202ENST00000585540 POLR3AO14802 1390 aaPredicted RBP19.52■□□□□ 0.72
PRKCSH-202ENST00000585540 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
PRKCSH-202ENST00000585540 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
PRKCSH-202ENST00000585540 PUS7Q96PZ0 661 aaKnown RBP19.51■□□□□ 0.71
PRKCSH-202ENST00000585540 PLEKHG3A1L390 1219 aa19.5■□□□□ 0.71
PRKCSH-202ENST00000585540 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
PRKCSH-202ENST00000585540 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
PRKCSH-202ENST00000585540 SPATA31A3Q5VYP0 1347 aa19.5■□□□□ 0.71
PRKCSH-202ENST00000585540 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-202ENST00000585540 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-202ENST00000585540 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-202ENST00000585540 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
PRKCSH-202ENST00000585540 LRP6O75581 1613 aa19.47■□□□□ 0.71
PRKCSH-202ENST00000585540 USP47Q96K76 1375 aa19.46■□□□□ 0.71
PRKCSH-202ENST00000585540 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
PRKCSH-202ENST00000585540 NINLQ9Y2I6 1382 aa19.45■□□□□ 0.7
PRKCSH-202ENST00000585540 ALS2Q96Q42 1657 aa19.45■□□□□ 0.7
PRKCSH-202ENST00000585540 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-202ENST00000585540 CABP2Q9NPB3 220 aa19.43■□□□□ 0.7
PRKCSH-202ENST00000585540 ACEP12821 1306 aa19.42■□□□□ 0.7
PRKCSH-202ENST00000585540 XPCQ01831 940 aaPredicted RBP19.41■□□□□ 0.7
PRKCSH-202ENST00000585540 CDCA8Q53HL2 280 aa19.41■□□□□ 0.7
PRKCSH-202ENST00000585540 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
PRKCSH-202ENST00000585540 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
PRKCSH-202ENST00000585540 MARF1Q9Y4F3 1742 aaKnown RBP19.41■□□□□ 0.7
PRKCSH-202ENST00000585540 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
PRKCSH-202ENST00000585540 TESK2Q96S53 571 aa19.4■□□□□ 0.7
PRKCSH-202ENST00000585540 TMF1P82094 1093 aa19.39■□□□□ 0.69
PRKCSH-202ENST00000585540 AKAP12Q02952 1782 aa19.39■□□□□ 0.69
PRKCSH-202ENST00000585540 NUTM2BA6NNL0 878 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-202ENST00000585540 NUTM2EB1AL46 878 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-202ENST00000585540 USP6P35125 1406 aa19.38■□□□□ 0.69
PRKCSH-202ENST00000585540 NUTM2AQ8IVF1 878 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms