RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 S1PR4O95977 384 aa11.72□□□□□ -0.53
RN7SL339P-201ENST00000580597 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
RN7SL339P-201ENST00000580597 FAM160A2Q8N612 972 aaPredicted RBP11.72□□□□□ -0.53
RN7SL339P-201ENST00000580597 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
RN7SL339P-201ENST00000580597 SPTLC1O15269 473 aa11.71□□□□□ -0.53
RN7SL339P-201ENST00000580597 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
RN7SL339P-201ENST00000580597 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
RN7SL339P-201ENST00000580597 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
RN7SL339P-201ENST00000580597 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
RN7SL339P-201ENST00000580597 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
RN7SL339P-201ENST00000580597 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
RN7SL339P-201ENST00000580597 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
RN7SL339P-201ENST00000580597 PRDM9Q9NQV7 894 aa11.68□□□□□ -0.54
RN7SL339P-201ENST00000580597 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
RN7SL339P-201ENST00000580597 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
RN7SL339P-201ENST00000580597 LIMD1Q9UGP4 676 aa11.66□□□□□ -0.54
RN7SL339P-201ENST00000580597 MMP16P51512 607 aa11.65□□□□□ -0.54
RN7SL339P-201ENST00000580597 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
RN7SL339P-201ENST00000580597 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
RN7SL339P-201ENST00000580597 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
RN7SL339P-201ENST00000580597 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
RN7SL339P-201ENST00000580597 MTMR2Q13614 643 aa11.64□□□□□ -0.55
RN7SL339P-201ENST00000580597 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
RN7SL339P-201ENST00000580597 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
RN7SL339P-201ENST00000580597 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
RN7SL339P-201ENST00000580597 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
RN7SL339P-201ENST00000580597 SKIV2LQ15477 1246 aaKnown RBP11.61□□□□□ -0.55
RN7SL339P-201ENST00000580597 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
RN7SL339P-201ENST00000580597 JUNDP17535 347 aa11.6□□□□□ -0.55
RN7SL339P-201ENST00000580597 HRCP23327 699 aa11.6□□□□□ -0.55
RN7SL339P-201ENST00000580597 FCF1Q9Y324 198 aaKnown RBP11.6□□□□□ -0.55
RN7SL339P-201ENST00000580597 V9GY48 417 aaPredicted RBP11.6□□□□□ -0.55
RN7SL339P-201ENST00000580597 EMID1Q96A84 441 aaPredicted RBP11.59□□□□□ -0.55
RN7SL339P-201ENST00000580597 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
RN7SL339P-201ENST00000580597 LILRB3O75022 631 aa11.58□□□□□ -0.56
RN7SL339P-201ENST00000580597 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
RN7SL339P-201ENST00000580597 PRR7Q8TB68 274 aa11.58□□□□□ -0.56
RN7SL339P-201ENST00000580597 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
RN7SL339P-201ENST00000580597 GOPCQ9HD26 462 aa11.58□□□□□ -0.56
RN7SL339P-201ENST00000580597 QPCTQ16769 361 aa11.57□□□□□ -0.56
RN7SL339P-201ENST00000580597 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
RN7SL339P-201ENST00000580597 DESI1Q6ICB0 168 aa11.57□□□□□ -0.56
RN7SL339P-201ENST00000580597 CABLES1Q8TDN4 633 aa11.57□□□□□ -0.56
RN7SL339P-201ENST00000580597 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
RN7SL339P-201ENST00000580597 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
RN7SL339P-201ENST00000580597 CFAP99D6REC4 459 aa11.55□□□□□ -0.56
RN7SL339P-201ENST00000580597 SLC19A1P41440 591 aa11.53□□□□□ -0.56
RN7SL339P-201ENST00000580597 LIAT1Q6ZQX7 453 aa11.53□□□□□ -0.56
RN7SL339P-201ENST00000580597 PTPRNQ16849 979 aa11.52□□□□□ -0.57
RN7SL339P-201ENST00000580597 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
RN7SL339P-201ENST00000580597 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
RN7SL339P-201ENST00000580597 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
RN7SL339P-201ENST00000580597 RPIAP49247 311 aa11.51□□□□□ -0.57
RN7SL339P-201ENST00000580597 NUTM2DQ5VT03 806 aaPredicted RBP11.51□□□□□ -0.57
RN7SL339P-201ENST00000580597 NUTM2AQ8IVF1 878 aaPredicted RBP11.51□□□□□ -0.57
RN7SL339P-201ENST00000580597 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
RN7SL339P-201ENST00000580597 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
RN7SL339P-201ENST00000580597 PPP2R2DQ66LE6 453 aa11.5□□□□□ -0.57
RN7SL339P-201ENST00000580597 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
RN7SL339P-201ENST00000580597 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
RN7SL339P-201ENST00000580597 FBXO31Q5XUX0 539 aaPredicted RBP11.48□□□□□ -0.57
RN7SL339P-201ENST00000580597 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
RN7SL339P-201ENST00000580597 PCMTD1Q96MG8 357 aaPredicted RBP11.47□□□□□ -0.57
RN7SL339P-201ENST00000580597 ZNF598Q86UK7 904 aaKnown RBP11.46□□□□□ -0.57
RN7SL339P-201ENST00000580597 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
RN7SL339P-201ENST00000580597 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
RN7SL339P-201ENST00000580597 EVA1BQ9NVM1 165 aa11.45□□□□□ -0.58
RN7SL339P-201ENST00000580597 ZBTB24O43167 697 aaPredicted RBP11.44□□□□□ -0.58
RN7SL339P-201ENST00000580597 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
RN7SL339P-201ENST00000580597 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
RN7SL339P-201ENST00000580597 TRIM32Q13049 653 aa11.43□□□□□ -0.58
RN7SL339P-201ENST00000580597 ZNF697Q5TEC3 545 aa11.43□□□□□ -0.58
RN7SL339P-201ENST00000580597 KCNH2Q12809 1159 aa11.42□□□□□ -0.58
RN7SL339P-201ENST00000580597 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
RN7SL339P-201ENST00000580597 TSC1Q92574 1164 aa11.42□□□□□ -0.58
RN7SL339P-201ENST00000580597 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
RN7SL339P-201ENST00000580597 CD2BP2O95400 341 aaKnown RBP11.41□□□□□ -0.58
RN7SL339P-201ENST00000580597 RFC5P40937 340 aa11.4□□□□□ -0.58
RN7SL339P-201ENST00000580597 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
RN7SL339P-201ENST00000580597 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.58
RN7SL339P-201ENST00000580597 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
RN7SL339P-201ENST00000580597 PRR20EP86478 221 aa11.38□□□□□ -0.59
RN7SL339P-201ENST00000580597 PRR20CP86479 221 aa11.38□□□□□ -0.59
RN7SL339P-201ENST00000580597 PRR20DP86480 221 aa11.38□□□□□ -0.59
RN7SL339P-201ENST00000580597 PRR20BP86481 221 aa11.38□□□□□ -0.59
RN7SL339P-201ENST00000580597 PRR20AP86496 221 aa11.38□□□□□ -0.59
RN7SL339P-201ENST00000580597 MAP10Q9P2G4 905 aa11.38□□□□□ -0.59
RN7SL339P-201ENST00000580597 GDF9O60383 454 aa11.37□□□□□ -0.59
RN7SL339P-201ENST00000580597 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
RN7SL339P-201ENST00000580597 WNT7BP56706 349 aa11.36□□□□□ -0.59
RN7SL339P-201ENST00000580597 PKD2L1Q9P0L9 805 aa11.36□□□□□ -0.59
RN7SL339P-201ENST00000580597 CTHP32929 405 aa11.35□□□□□ -0.59
RN7SL339P-201ENST00000580597 LAPTM4AQ15012 233 aa11.35□□□□□ -0.59
RN7SL339P-201ENST00000580597 AP1G2O75843 785 aa11.34□□□□□ -0.59
RN7SL339P-201ENST00000580597 SKOR1P84550 965 aa11.34□□□□□ -0.59
RN7SL339P-201ENST00000580597 PDZRN3Q9UPQ7 1066 aa11.34□□□□□ -0.59
RN7SL339P-201ENST00000580597 WNT7AO00755 349 aa11.33□□□□□ -0.6
RN7SL339P-201ENST00000580597 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
RN7SL339P-201ENST00000580597 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
RN7SL339P-201ENST00000580597 TMEM259Q4ZIN3 620 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms