RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
CDH8-203ENST00000577390 IPO8O15397 1037 aaKnown RBP10.63□□□□□ -0.71
CDH8-203ENST00000577390 LRRFIP1Q32MZ4 808 aaKnown RBP10.63□□□□□ -0.71
CDH8-203ENST00000577390 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
CDH8-203ENST00000577390 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
CDH8-203ENST00000577390 CPLX2Q6PUV4 134 aaKnown RBP10.63□□□□□ -0.71
CDH8-203ENST00000577390 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
CDH8-203ENST00000577390 AMPHP49418 695 aa10.63□□□□□ -0.71
CDH8-203ENST00000577390 MORC1Q86VD1 984 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 DEF6Q9H4E7 631 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 VIRMAQ69YN4 1812 aaKnown RBP10.62□□□□□ -0.71
CDH8-203ENST00000577390 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 GBP2P32456 591 aaPredicted RBP10.62□□□□□ -0.71
CDH8-203ENST00000577390 MRPS9P82933 396 aaKnown RBP10.62□□□□□ -0.71
CDH8-203ENST00000577390 SASS6Q6UVJ0 657 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 GRM1Q13255 1194 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 TTLL5Q6EMB2 1281 aa10.62□□□□□ -0.71
CDH8-203ENST00000577390 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 CRBNQ96SW2 442 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 CPLX1O14810 134 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 TRDNQ13061 729 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 CCDC112Q8NEF3 446 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 TERF1P54274 439 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
CDH8-203ENST00000577390 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 DMTNQ08495 405 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 C1orf141Q5JVX7 400 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 UTP14CQ5TAP6 766 aaKnown RBP10.6□□□□□ -0.71
CDH8-203ENST00000577390 VGLL3A8MV65 326 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 TRAK2O60296 914 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 RBM5P52756 815 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDH8-203ENST00000577390 TEX2Q8IWB9 1127 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 DYDC1Q8WWB3 177 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 EID1Q9Y6B2 187 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 ANAPC15P60006 121 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 PABPN1LA6NDY0 278 aaKnown RBP10.6□□□□□ -0.71
CDH8-203ENST00000577390 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 TTC5Q8N0Z6 440 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 MCM5P33992 734 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 CHMP5Q9NZZ3 219 aa10.6□□□□□ -0.71
CDH8-203ENST00000577390 SCLT1Q96NL6 688 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 KANK1Q14678 1352 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 CDK5RAP3Q96JB5 506 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 RILPL2Q969X0 211 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
CDH8-203ENST00000577390 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
CDH8-203ENST00000577390 SOGA3Q5TF21 947 aa10.59□□□□□ -0.71
CDH8-203ENST00000577390 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
CDH8-203ENST00000577390 CTR9Q6PD62 1173 aa10.58□□□□□ -0.72
CDH8-203ENST00000577390 SMC4Q9NTJ3 1288 aa10.58□□□□□ -0.72
CDH8-203ENST00000577390 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
CDH8-203ENST00000577390 BAZ1AQ9NRL2 1556 aaPredicted RBP10.58□□□□□ -0.72
CDH8-203ENST00000577390 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
CDH8-203ENST00000577390 RRAGDQ9NQL2 400 aaPredicted RBP10.58□□□□□ -0.72
CDH8-203ENST00000577390 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
CDH8-203ENST00000577390 FOSBP53539 338 aa10.57□□□□□ -0.72
CDH8-203ENST00000577390 DDX49Q9Y6V7 483 aaKnown RBP10.57□□□□□ -0.72
CDH8-203ENST00000577390 CNTLNQ9NXG0 1405 aa10.57□□□□□ -0.72
CDH8-203ENST00000577390 BRMS1Q9HCU9 246 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 CCDC175P0C221 793 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 PPM1EQ8WY54 764 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 SART3Q15020 963 aaKnown RBP10.56□□□□□ -0.72
CDH8-203ENST00000577390 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 TAX1BP1Q86VP1 789 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 LRSAM1Q6UWE0 723 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 STAMBPO95630 424 aa10.56□□□□□ -0.72
CDH8-203ENST00000577390 CHMP4CQ96CF2 233 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 ZNF622Q969S3 477 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH8-203ENST00000577390 EXOC6Q8TAG9 804 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 CCDC181Q5TID7 509 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 KDM4AO75164 1064 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 ERLIN2O94905 339 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 DNAI2Q9GZS0 605 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 KIF3BO15066 747 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 PLIN1O60240 522 aa10.55□□□□□ -0.72
CDH8-203ENST00000577390 XRCC6P12956 609 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH8-203ENST00000577390 SSR1P43307 286 aaKnown RBP10.55□□□□□ -0.72
CDH8-203ENST00000577390 GGT6Q6P531 493 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 FAM193AP78312 1265 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 FEZ1Q99689 392 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 ZHX3Q9H4I2 956 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 CNPY4Q8N129 248 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 ST18O60284 1047 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH8-203ENST00000577390 ACBD3Q9H3P7 528 aa10.54□□□□□ -0.72
CDH8-203ENST00000577390 GTF2A1P52655 376 aaPredicted RBP10.54□□□□□ -0.72
CDH8-203ENST00000577390 C16orf71Q8IYS4 520 aaPredicted RBP10.53□□□□□ -0.72
CDH8-203ENST00000577390 ERICH4A6NGS2 130 aa10.53□□□□□ -0.72
CDH8-203ENST00000577390 CFAP65Q6ZU64 1925 aaKnown RBP10.53□□□□□ -0.72
CDH8-203ENST00000577390 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
CDH8-203ENST00000577390 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
CDH8-203ENST00000577390 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDH8-203ENST00000577390 MNS1Q8NEH6 495 aa10.53□□□□□ -0.72
CDH8-203ENST00000577390 ARGLU1Q9NWB6 273 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms