RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
NCBP3-204ENST00000574911 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
NCBP3-204ENST00000574911 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
NCBP3-204ENST00000574911 CFAP65Q6ZU64 1925 aaKnown RBP11.66□□□□□ -0.54
NCBP3-204ENST00000574911 ARHGEF28Q8N1W1 1705 aaKnown RBP11.66□□□□□ -0.54
NCBP3-204ENST00000574911 BCAR3O75815 825 aa11.66□□□□□ -0.54
NCBP3-204ENST00000574911 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
NCBP3-204ENST00000574911 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
NCBP3-204ENST00000574911 IQSEC2Q5JU85 1478 aa11.65□□□□□ -0.54
NCBP3-204ENST00000574911 NBR1Q14596 966 aa11.65□□□□□ -0.54
NCBP3-204ENST00000574911 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.55
NCBP3-204ENST00000574911 RAPGEF3O95398 923 aa11.65□□□□□ -0.55
NCBP3-204ENST00000574911 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
NCBP3-204ENST00000574911 EVC2Q86UK5 1308 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 ZFYVE9O95405 1425 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 PHF23Q9BUL5 403 aaPredicted RBP11.63□□□□□ -0.55
NCBP3-204ENST00000574911 CGNL1Q0VF96 1302 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 NSD2O96028 1365 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 DEKP35659 375 aaKnown RBP11.63□□□□□ -0.55
NCBP3-204ENST00000574911 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 RICTORQ6R327 1708 aa11.63□□□□□ -0.55
NCBP3-204ENST00000574911 PDE3AQ14432 1141 aa11.62□□□□□ -0.55
NCBP3-204ENST00000574911 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
NCBP3-204ENST00000574911 MTHFSP49914 203 aa11.61□□□□□ -0.55
NCBP3-204ENST00000574911 IDI1Q13907 227 aa11.61□□□□□ -0.55
NCBP3-204ENST00000574911 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
NCBP3-204ENST00000574911 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
NCBP3-204ENST00000574911 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
NCBP3-204ENST00000574911 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
NCBP3-204ENST00000574911 CCDC27Q2M243 656 aa11.6□□□□□ -0.55
NCBP3-204ENST00000574911 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
NCBP3-204ENST00000574911 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
NCBP3-204ENST00000574911 C8orf34Q49A92 452 aa11.6□□□□□ -0.55
NCBP3-204ENST00000574911 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
NCBP3-204ENST00000574911 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
NCBP3-204ENST00000574911 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
NCBP3-204ENST00000574911 RRP7AQ9Y3A4 280 aaKnown RBP11.59□□□□□ -0.55
NCBP3-204ENST00000574911 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
NCBP3-204ENST00000574911 TMEM131LA2VDJ0 1609 aa11.58□□□□□ -0.56
NCBP3-204ENST00000574911 IGHDP01880 384 aa11.58□□□□□ -0.56
NCBP3-204ENST00000574911 RARSP54136 660 aaKnown RBP11.58□□□□□ -0.56
NCBP3-204ENST00000574911 RTL5Q5HYW3 569 aaPredicted RBP11.58□□□□□ -0.56
NCBP3-204ENST00000574911 ADGRB2O60241 1585 aa11.58□□□□□ -0.56
NCBP3-204ENST00000574911 PREX1Q8TCU6 1659 aa11.58□□□□□ -0.56
NCBP3-204ENST00000574911 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
NCBP3-204ENST00000574911 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
NCBP3-204ENST00000574911 PTPRMP28827 1452 aa11.57□□□□□ -0.56
NCBP3-204ENST00000574911 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
NCBP3-204ENST00000574911 CLUAP1Q96AJ1 413 aa11.56□□□□□ -0.56
NCBP3-204ENST00000574911 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
NCBP3-204ENST00000574911 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
NCBP3-204ENST00000574911 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
NCBP3-204ENST00000574911 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
NCBP3-204ENST00000574911 RGS3P49796 1198 aa11.55□□□□□ -0.56
NCBP3-204ENST00000574911 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
NCBP3-204ENST00000574911 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
NCBP3-204ENST00000574911 AAMPQ13685 434 aa11.55□□□□□ -0.56
NCBP3-204ENST00000574911 COL3A1P02461 1466 aaPredicted RBP11.54□□□□□ -0.56
NCBP3-204ENST00000574911 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
NCBP3-204ENST00000574911 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
NCBP3-204ENST00000574911 MED14O60244 1454 aa11.54□□□□□ -0.56
NCBP3-204ENST00000574911 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
NCBP3-204ENST00000574911 STK26Q9P289 416 aa11.54□□□□□ -0.56
NCBP3-204ENST00000574911 CD163L1Q9NR16 1453 aa11.53□□□□□ -0.56
NCBP3-204ENST00000574911 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
NCBP3-204ENST00000574911 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.568e-6■□□□□ 10.6
NCBP3-204ENST00000574911 YTHDC2Q9H6S0 1430 aaKnown RBP11.53□□□□□ -0.56
NCBP3-204ENST00000574911 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
NCBP3-204ENST00000574911 ANKRD26Q9UPS8 1709 aa11.53□□□□□ -0.56
NCBP3-204ENST00000574911 FRAT1Q92837 279 aaPredicted RBP11.53□□□□□ -0.56
NCBP3-204ENST00000574911 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
NCBP3-204ENST00000574911 SRPK2P78362 688 aaKnown RBP11.52□□□□□ -0.56
NCBP3-204ENST00000574911 NLRP1Q9C000 1473 aa11.52□□□□□ -0.56
NCBP3-204ENST00000574911 PLEKHF1Q96S99 279 aa11.52□□□□□ -0.57
NCBP3-204ENST00000574911 NEFMP07197 916 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 PRAM1Q96QH2 718 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 ALKQ9UM73 1620 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 RLBP1P12271 317 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 PMFBP1Q8TBY8 1022 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
NCBP3-204ENST00000574911 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
NCBP3-204ENST00000574911 FYB1O15117 783 aa11.5□□□□□ -0.57
NCBP3-204ENST00000574911 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
NCBP3-204ENST00000574911 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
NCBP3-204ENST00000574911 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
NCBP3-204ENST00000574911 PCDHB15Q9Y5E8 787 aa11.5□□□□□ -0.57
NCBP3-204ENST00000574911 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
NCBP3-204ENST00000574911 POGKQ9P215 609 aa11.49□□□□□ -0.57
NCBP3-204ENST00000574911 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
NCBP3-204ENST00000574911 TMPOP42166 694 aaKnown RBP11.48□□□□□ -0.57
NCBP3-204ENST00000574911 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
NCBP3-204ENST00000574911 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
NCBP3-204ENST00000574911 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
NCBP3-204ENST00000574911 USP19O94966 1318 aa11.48□□□□□ -0.57
NCBP3-204ENST00000574911 ZMYM3Q14202 1370 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms