RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 S1PR4O95977 384 aa7.54□□□□□ -1.2
HMGB1P6-201ENST00000569046 DIXDC1Q155Q3 683 aa7.54□□□□□ -1.2
HMGB1P6-201ENST00000569046 RIC3Q7Z5B4 369 aa7.54□□□□□ -1.2
HMGB1P6-201ENST00000569046 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
HMGB1P6-201ENST00000569046 Q3C1V9 767 aa7.53□□□□□ -1.2
HMGB1P6-201ENST00000569046 PRDM9Q9NQV7 894 aa7.53□□□□□ -1.2
HMGB1P6-201ENST00000569046 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
HMGB1P6-201ENST00000569046 PPEF1O14829 653 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P6-201ENST00000569046 SLC6A16Q9GZN6 736 aa7.52□□□□□ -1.21
HMGB1P6-201ENST00000569046 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.52□□□□□ -1.21
HMGB1P6-201ENST00000569046 RNF223E7ERA6 249 aa7.51□□□□□ -1.21
HMGB1P6-201ENST00000569046 GJA5P36382 358 aa7.51□□□□□ -1.21
HMGB1P6-201ENST00000569046 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
HMGB1P6-201ENST00000569046 USB1Q9BQ65 265 aaKnown RBP7.51□□□□□ -1.21
HMGB1P6-201ENST00000569046 RSPH6AQ9H0K4 717 aa7.51□□□□□ -1.21
HMGB1P6-201ENST00000569046 C6orf229H3BNL8 230 aa7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 CLK2P49760 499 aaKnown RBP7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 QPCTQ16769 361 aa7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 SH3D19Q5HYK7 790 aa7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 FBXO31Q5XUX0 539 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 PROCA1Q8NCQ7 364 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
HMGB1P6-201ENST00000569046 HRCP23327 699 aa7.49□□□□□ -1.21
HMGB1P6-201ENST00000569046 SKIV2LQ15477 1246 aaKnown RBP7.49□□□□□ -1.21
HMGB1P6-201ENST00000569046 MTMR2Q13614 643 aa7.48□□□□□ -1.21
HMGB1P6-201ENST00000569046 TUSC1Q2TAM9 212 aa7.48□□□□□ -1.21
HMGB1P6-201ENST00000569046 RETREG3Q86VR2 466 aa7.48□□□□□ -1.21
HMGB1P6-201ENST00000569046 EMID1Q96A84 441 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P6-201ENST00000569046 LILRB3O75022 631 aa7.47□□□□□ -1.21
HMGB1P6-201ENST00000569046 PLA2G2CQ5R387 149 aa7.47□□□□□ -1.21
HMGB1P6-201ENST00000569046 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGB1P6-201ENST00000569046 CFAP99D6REC4 459 aa7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 GGCXP38435 758 aa7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 MMP16P51512 607 aa7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 RTL5Q5HYW3 569 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 PRPF38BQ5VTL8 546 aaKnown RBP7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 ANKLE1Q8NAG6 615 aa7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 PRR7Q8TB68 274 aa7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
HMGB1P6-201ENST00000569046 FCF1Q9Y324 198 aaKnown RBP7.45□□□□□ -1.22
HMGB1P6-201ENST00000569046 SPDYE5A6NIY4 337 aa7.44□□□□□ -1.22
HMGB1P6-201ENST00000569046 JUNDP17535 347 aa7.44□□□□□ -1.22
HMGB1P6-201ENST00000569046 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
HMGB1P6-201ENST00000569046 NUTM2BA6NNL0 878 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P6-201ENST00000569046 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P6-201ENST00000569046 NUTM2DQ5VT03 806 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P6-201ENST00000569046 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P6-201ENST00000569046 LIAT1Q6ZQX7 453 aa7.42□□□□□ -1.22
HMGB1P6-201ENST00000569046 PRKD2Q9BZL6 878 aa7.42□□□□□ -1.22
HMGB1P6-201ENST00000569046 RGS20O76081 388 aa7.41□□□□□ -1.22
HMGB1P6-201ENST00000569046 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
HMGB1P6-201ENST00000569046 ATP1B4Q9UN42 357 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P6-201ENST00000569046 PER1O15534 1290 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P6-201ENST00000569046 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
HMGB1P6-201ENST00000569046 PCMTD1Q96MG8 357 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P6-201ENST00000569046 LYPD8Q6UX82 237 aa7.39□□□□□ -1.23
HMGB1P6-201ENST00000569046 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
HMGB1P6-201ENST00000569046 TSC1Q92574 1164 aa7.39□□□□□ -1.23
HMGB1P6-201ENST00000569046 NUDT12Q9BQG2 462 aa7.39□□□□□ -1.23
HMGB1P6-201ENST00000569046 SLC19A1P41440 591 aa7.38□□□□□ -1.23
HMGB1P6-201ENST00000569046 CTDSPL2Q05D32 466 aa7.38□□□□□ -1.23
HMGB1P6-201ENST00000569046 PTPRNQ16849 979 aa7.38□□□□□ -1.23
HMGB1P6-201ENST00000569046 PTCRAQ6ISU1 281 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P6-201ENST00000569046 V9GY48 417 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P6-201ENST00000569046 CCNYL3P0C7X3 344 aa7.37□□□□□ -1.23
HMGB1P6-201ENST00000569046 RFC5P40937 340 aa7.37□□□□□ -1.23
HMGB1P6-201ENST00000569046 SPRYD7Q5W111 196 aa7.37□□□□□ -1.23
HMGB1P6-201ENST00000569046 EVA1BQ9NVM1 165 aa7.36□□□□□ -1.23
HMGB1P6-201ENST00000569046 F12P00748 615 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P6-201ENST00000569046 MAP10Q9P2G4 905 aa7.35□□□□□ -1.23
HMGB1P6-201ENST00000569046 AP1G2O75843 785 aa7.34□□□□□ -1.23
HMGB1P6-201ENST00000569046 RPIAP49247 311 aa7.34□□□□□ -1.23
HMGB1P6-201ENST00000569046 KCNH2Q12809 1159 aa7.34□□□□□ -1.23
HMGB1P6-201ENST00000569046 HELBQ8NG08 1087 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P6-201ENST00000569046 LRRN4Q8WUT4 740 aa7.34□□□□□ -1.23
HMGB1P6-201ENST00000569046 ZBTB24O43167 697 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P6-201ENST00000569046 TRIM32Q13049 653 aa7.33□□□□□ -1.24
HMGB1P6-201ENST00000569046 TRIM67Q6ZTA4 783 aa7.33□□□□□ -1.24
HMGB1P6-201ENST00000569046 ZNF598Q86UK7 904 aaKnown RBP7.33□□□□□ -1.24
HMGB1P6-201ENST00000569046 ZNF697Q5TEC3 545 aa7.32□□□□□ -1.24
HMGB1P6-201ENST00000569046 UNC93B1Q9H1C4 597 aa7.32□□□□□ -1.24
HMGB1P6-201ENST00000569046 USP17L8P0C7I0 530 aa7.31□□□□□ -1.24
HMGB1P6-201ENST00000569046 CTHP32929 405 aa7.31□□□□□ -1.24
HMGB1P6-201ENST00000569046 SKOR1P84550 965 aa7.31□□□□□ -1.24
HMGB1P6-201ENST00000569046 HMX1Q9NP08 348 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P6-201ENST00000569046 CD2BP2O95400 341 aaKnown RBP7.3□□□□□ -1.24
HMGB1P6-201ENST00000569046 EPS8L1Q8TE68 723 aa7.3□□□□□ -1.24
HMGB1P6-201ENST00000569046 PKD2L1Q9P0L9 805 aa7.3□□□□□ -1.24
HMGB1P6-201ENST00000569046 GDF9O60383 454 aa7.29□□□□□ -1.24
HMGB1P6-201ENST00000569046 NR6A1Q15406 480 aa7.29□□□□□ -1.24
HMGB1P6-201ENST00000569046 TMEM132AQ24JP5 1023 aa7.29□□□□□ -1.24
HMGB1P6-201ENST00000569046 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
HMGB1P6-201ENST00000569046 BAP1Q92560 729 aa7.29□□□□□ -1.24
HMGB1P6-201ENST00000569046 SH3BP2P78314 561 aa7.28□□□□□ -1.24
HMGB1P6-201ENST00000569046 TMEM259Q4ZIN3 620 aa7.28□□□□□ -1.24
HMGB1P6-201ENST00000569046 TNFRSF10AO00220 468 aa7.27□□□□□ -1.25
HMGB1P6-201ENST00000569046 FOXC1Q12948 553 aa7.27□□□□□ -1.25
HMGB1P6-201ENST00000569046 TRIM34Q9BYJ4 488 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms