RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
KARS-206ENST00000566249 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
KARS-206ENST00000566249 RFC5P40937 340 aa11.61□□□□□ -0.55
KARS-206ENST00000566249 MTMR2Q13614 643 aa11.61□□□□□ -0.55
KARS-206ENST00000566249 BLOC1S3Q6QNY0 202 aa11.61□□□□□ -0.55
KARS-206ENST00000566249 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
KARS-206ENST00000566249 Q3C1V9 767 aa11.6□□□□□ -0.55
KARS-206ENST00000566249 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
KARS-206ENST00000566249 NR1I2O75469 434 aa11.59□□□□□ -0.55
KARS-206ENST00000566249 COPS2P61201 443 aa11.59□□□□□ -0.55
KARS-206ENST00000566249 SYMPKQ92797 1274 aaKnown RBP11.59□□□□□ -0.55
KARS-206ENST00000566249 SCUBE3Q8IX30 993 aa11.58□□□□□ -0.56
KARS-206ENST00000566249 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
KARS-206ENST00000566249 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
KARS-206ENST00000566249 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
KARS-206ENST00000566249 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
KARS-206ENST00000566249 BRICD5Q6PL45 260 aa11.54□□□□□ -0.56
KARS-206ENST00000566249 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
KARS-206ENST00000566249 MTRQ99707 1265 aa11.54□□□□□ -0.56
KARS-206ENST00000566249 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
KARS-206ENST00000566249 AP1G2O75843 785 aa11.53□□□□□ -0.56
KARS-206ENST00000566249 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
KARS-206ENST00000566249 FLIIQ13045 1269 aa11.53□□□□□ -0.56
KARS-206ENST00000566249 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
KARS-206ENST00000566249 TSC1Q92574 1164 aa11.53□□□□□ -0.56
KARS-206ENST00000566249 TIMELESSQ9UNS1 1208 aa11.53□□□□□ -0.56
KARS-206ENST00000566249 CFAP99D6REC4 459 aa11.52□□□□□ -0.57
KARS-206ENST00000566249 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
KARS-206ENST00000566249 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
KARS-206ENST00000566249 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
KARS-206ENST00000566249 BANK1Q8NDB2 785 aa11.51□□□□□ -0.57
KARS-206ENST00000566249 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
KARS-206ENST00000566249 ZPR1O75312 459 aa11.5□□□□□ -0.57
KARS-206ENST00000566249 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
KARS-206ENST00000566249 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
KARS-206ENST00000566249 IL21Q9HBE4 155 aa11.5□□□□□ -0.57
KARS-206ENST00000566249 TLL1O43897 1013 aa11.49□□□□□ -0.57
KARS-206ENST00000566249 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
KARS-206ENST00000566249 MCM6Q14566 821 aa11.49□□□□□ -0.57
KARS-206ENST00000566249 SPSB2Q99619 263 aa11.49□□□□□ -0.57
KARS-206ENST00000566249 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
KARS-206ENST00000566249 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
KARS-206ENST00000566249 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
KARS-206ENST00000566249 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
KARS-206ENST00000566249 ADH1BP00325 375 aa11.44□□□□□ -0.58
KARS-206ENST00000566249 DESI1Q6ICB0 168 aa11.44□□□□□ -0.58
KARS-206ENST00000566249 MSS51Q4VC12 460 aa11.43□□□□□ -0.58
KARS-206ENST00000566249 FAM160A2Q8N612 972 aaPredicted RBP11.43□□□□□ -0.58
KARS-206ENST00000566249 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
KARS-206ENST00000566249 JUNDP17535 347 aa11.42□□□□□ -0.58
KARS-206ENST00000566249 MTMR14Q8NCE2 650 aa11.42□□□□□ -0.58
KARS-206ENST00000566249 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
KARS-206ENST00000566249 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
KARS-206ENST00000566249 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
KARS-206ENST00000566249 PER1O15534 1290 aaPredicted RBP11.4□□□□□ -0.58
KARS-206ENST00000566249 KCNC4Q03721 635 aa11.4□□□□□ -0.58
KARS-206ENST00000566249 LYPD8Q6UX82 237 aa11.39□□□□□ -0.59
KARS-206ENST00000566249 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
KARS-206ENST00000566249 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
KARS-206ENST00000566249 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
KARS-206ENST00000566249 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
KARS-206ENST00000566249 APBB1O00213 710 aa11.37□□□□□ -0.59
KARS-206ENST00000566249 SOCS7O14512 581 aa11.37□□□□□ -0.59
KARS-206ENST00000566249 MMP16P51512 607 aa11.37□□□□□ -0.59
KARS-206ENST00000566249 PTPRNQ16849 979 aa11.36□□□□□ -0.59
KARS-206ENST00000566249 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
KARS-206ENST00000566249 ZMYND15Q9H091 742 aa11.36□□□□□ -0.59
KARS-206ENST00000566249 RAD21O60216 631 aa11.35□□□□□ -0.59
KARS-206ENST00000566249 S1PR4O95977 384 aa11.35□□□□□ -0.59
KARS-206ENST00000566249 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
KARS-206ENST00000566249 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
KARS-206ENST00000566249 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
KARS-206ENST00000566249 NR6A1Q15406 480 aa11.33□□□□□ -0.6
KARS-206ENST00000566249 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
KARS-206ENST00000566249 PRM3Q9NNZ6 103 aa11.33□□□□□ -0.6
KARS-206ENST00000566249 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
KARS-206ENST00000566249 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
KARS-206ENST00000566249 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
KARS-206ENST00000566249 GDPD2Q9HCC8 539 aa11.32□□□□□ -0.6
KARS-206ENST00000566249 CTHP32929 405 aa11.31□□□□□ -0.6
KARS-206ENST00000566249 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
KARS-206ENST00000566249 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
KARS-206ENST00000566249 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
KARS-206ENST00000566249 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
KARS-206ENST00000566249 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
KARS-206ENST00000566249 A6NJR5 290 aa11.29□□□□□ -0.6
KARS-206ENST00000566249 EVA1BQ9NVM1 165 aa11.29□□□□□ -0.6
KARS-206ENST00000566249 ABL2P42684 1182 aa11.28□□□□□ -0.6
KARS-206ENST00000566249 FCF1Q9Y324 198 aaKnown RBP11.28□□□□□ -0.6
KARS-206ENST00000566249 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
KARS-206ENST00000566249 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
KARS-206ENST00000566249 GGCXP38435 758 aa11.26□□□□□ -0.61
KARS-206ENST00000566249 PROSER2Q86WR7 435 aaPredicted RBP11.26□□□□□ -0.61
KARS-206ENST00000566249 PNMA1Q8ND90 353 aa11.25□□□□□ -0.61
KARS-206ENST00000566249 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
KARS-206ENST00000566249 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
KARS-206ENST00000566249 TRAK2O60296 914 aa11.22□□□□□ -0.61
KARS-206ENST00000566249 GPR37L1O60883 481 aa11.22□□□□□ -0.61
KARS-206ENST00000566249 PTCRAQ6ISU1 281 aaPredicted RBP11.22□□□□□ -0.61
KARS-206ENST00000566249 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms