RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
CCNDBP1-207ENST00000565958 SUPT5HO00267 1087 aaKnown RBP9.71□□□□□ -0.86
CCNDBP1-207ENST00000565958 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
CCNDBP1-207ENST00000565958 FAM161AQ3B820 660 aa9.7□□□□□ -0.86
CCNDBP1-207ENST00000565958 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
CCNDBP1-207ENST00000565958 TRIM66O15016 1216 aa9.69□□□□□ -0.86
CCNDBP1-207ENST00000565958 PDE4DQ08499 809 aa9.68□□□□□ -0.86
CCNDBP1-207ENST00000565958 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
CCNDBP1-207ENST00000565958 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
CCNDBP1-207ENST00000565958 TTC24A2A3L6 582 aaPredicted RBP9.67□□□□□ -0.86
CCNDBP1-207ENST00000565958 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
CCNDBP1-207ENST00000565958 OATP04181 439 aa9.66□□□□□ -0.86
CCNDBP1-207ENST00000565958 TERTO14746 1132 aaKnown RBP9.64□□□□□ -0.87
CCNDBP1-207ENST00000565958 GPR37O15354 613 aa9.64□□□□□ -0.87
CCNDBP1-207ENST00000565958 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
CCNDBP1-207ENST00000565958 FCHSD2O94868 740 aa9.63□□□□□ -0.87
CCNDBP1-207ENST00000565958 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
CCNDBP1-207ENST00000565958 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
CCNDBP1-207ENST00000565958 ZBTB24O43167 697 aaPredicted RBP9.62□□□□□ -0.87
CCNDBP1-207ENST00000565958 MORN1Q5T089 497 aa9.62□□□□□ -0.87
CCNDBP1-207ENST00000565958 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
CCNDBP1-207ENST00000565958 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
CCNDBP1-207ENST00000565958 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
CCNDBP1-207ENST00000565958 FAM160A2Q8N612 972 aaPredicted RBP9.61□□□□□ -0.87
CCNDBP1-207ENST00000565958 SNIP1Q8TAD8 396 aaKnown RBP9.61□□□□□ -0.87
CCNDBP1-207ENST00000565958 SMPD1P17405 629 aa9.6□□□□□ -0.87
CCNDBP1-207ENST00000565958 TRIM47Q96LD4 638 aa9.6□□□□□ -0.87
CCNDBP1-207ENST00000565958 MINK1Q8N4C8 1332 aaPredicted RBP9.59□□□□□ -0.87
CCNDBP1-207ENST00000565958 WNT7AO00755 349 aa9.59□□□□□ -0.87
CCNDBP1-207ENST00000565958 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
CCNDBP1-207ENST00000565958 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
CCNDBP1-207ENST00000565958 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
CCNDBP1-207ENST00000565958 FAM181BA6NEQ2 426 aa9.58□□□□□ -0.88
CCNDBP1-207ENST00000565958 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
CCNDBP1-207ENST00000565958 FUT2Q10981 343 aa9.57□□□□□ -0.88
CCNDBP1-207ENST00000565958 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
CCNDBP1-207ENST00000565958 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
CCNDBP1-207ENST00000565958 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
CCNDBP1-207ENST00000565958 KIFC2Q96AC6 838 aa9.57□□□□□ -0.88
CCNDBP1-207ENST00000565958 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
CCNDBP1-207ENST00000565958 ZMYND15Q9H091 742 aa9.56□□□□□ -0.88
CCNDBP1-207ENST00000565958 SLC27A5Q9Y2P5 690 aa9.56□□□□□ -0.88
CCNDBP1-207ENST00000565958 BRICD5Q6PL45 260 aa9.55□□□□□ -0.88
CCNDBP1-207ENST00000565958 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
CCNDBP1-207ENST00000565958 AMHR2Q16671 573 aa9.54□□□□□ -0.88
CCNDBP1-207ENST00000565958 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
CCNDBP1-207ENST00000565958 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
CCNDBP1-207ENST00000565958 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
CCNDBP1-207ENST00000565958 IRF6O14896 467 aa9.53□□□□□ -0.88
CCNDBP1-207ENST00000565958 GNPATO15228 680 aa9.53□□□□□ -0.88
CCNDBP1-207ENST00000565958 SLC16A10Q8TF71 515 aa9.53□□□□□ -0.88
CCNDBP1-207ENST00000565958 J3QL48 77 aa9.52□□□□□ -0.89
CCNDBP1-207ENST00000565958 TRIM32Q13049 653 aa9.52□□□□□ -0.89
CCNDBP1-207ENST00000565958 HIC1Q14526 733 aa9.52□□□□□ -0.89
CCNDBP1-207ENST00000565958 PARP9Q8IXQ6 854 aa9.52□□□□□ -0.89
CCNDBP1-207ENST00000565958 MRGPRX2Q96LB1 330 aa9.52□□□□□ -0.89
CCNDBP1-207ENST00000565958 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
CCNDBP1-207ENST00000565958 GCGRP47871 477 aa9.51□□□□□ -0.89
CCNDBP1-207ENST00000565958 REPIN1Q9BWE0 567 aaKnown RBP9.51□□□□□ -0.89
CCNDBP1-207ENST00000565958 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
CCNDBP1-207ENST00000565958 FECHP22830 423 aa9.5□□□□□ -0.89
CCNDBP1-207ENST00000565958 HPS1Q92902 700 aa9.49□□□□□ -0.89
CCNDBP1-207ENST00000565958 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
CCNDBP1-207ENST00000565958 GRIPAP1Q4V328 841 aa9.48□□□□□ -0.89
CCNDBP1-207ENST00000565958 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
CCNDBP1-207ENST00000565958 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
CCNDBP1-207ENST00000565958 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
CCNDBP1-207ENST00000565958 MMP16P51512 607 aa9.46□□□□□ -0.9
CCNDBP1-207ENST00000565958 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.9
CCNDBP1-207ENST00000565958 ZSCAN1Q8NBB4 408 aa9.46□□□□□ -0.9
CCNDBP1-207ENST00000565958 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
CCNDBP1-207ENST00000565958 Q3C1V9 767 aa9.45□□□□□ -0.9
CCNDBP1-207ENST00000565958 NPAS3Q8IXF0 933 aa9.45□□□□□ -0.9
CCNDBP1-207ENST00000565958 IRF7Q92985 503 aa9.44□□□□□ -0.9
CCNDBP1-207ENST00000565958 GMPRP36959 345 aa9.43□□□□□ -0.9
CCNDBP1-207ENST00000565958 FLIIQ13045 1269 aa9.43□□□□□ -0.9
CCNDBP1-207ENST00000565958 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
CCNDBP1-207ENST00000565958 UBTFP17480 764 aaKnown RBP9.42□□□□□ -0.9
CCNDBP1-207ENST00000565958 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
CCNDBP1-207ENST00000565958 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
CCNDBP1-207ENST00000565958 WNT7BP56706 349 aa9.41□□□□□ -0.9
CCNDBP1-207ENST00000565958 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
CCNDBP1-207ENST00000565958 DXOO77932 396 aaKnown RBP9.39□□□□□ -0.91
CCNDBP1-207ENST00000565958 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
CCNDBP1-207ENST00000565958 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
CCNDBP1-207ENST00000565958 ALDH1A1P00352 501 aa9.38□□□□□ -0.91
CCNDBP1-207ENST00000565958 SKOR1P84550 965 aa9.37□□□□□ -0.91
CCNDBP1-207ENST00000565958 PCMTD1Q96MG8 357 aaPredicted RBP9.37□□□□□ -0.91
CCNDBP1-207ENST00000565958 H3BM21 787 aa9.36□□□□□ -0.91
CCNDBP1-207ENST00000565958 MS4A1P11836 297 aa9.36□□□□□ -0.91
CCNDBP1-207ENST00000565958 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
CCNDBP1-207ENST00000565958 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
CCNDBP1-207ENST00000565958 ARID3AQ99856 593 aa9.35□□□□□ -0.91
CCNDBP1-207ENST00000565958 CAPN5O15484 640 aaPredicted RBP9.33□□□□□ -0.92
CCNDBP1-207ENST00000565958 CLCN1P35523 988 aa9.33□□□□□ -0.92
CCNDBP1-207ENST00000565958 TRIM46Q7Z4K8 759 aa9.33□□□□□ -0.92
CCNDBP1-207ENST00000565958 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
CCNDBP1-207ENST00000565958 PODXL2Q9NZ53 605 aa9.33□□□□□ -0.92
CCNDBP1-207ENST00000565958 BMP1P13497 986 aa9.32□□□□□ -0.92
CCNDBP1-207ENST00000565958 SH3D19Q5HYK7 790 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms