RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 BCANQ96GW7 911 aa11.2□□□□□ -0.62
ZEB1-223ENST00000561304 PHLPP1O60346 1717 aa11.19□□□□□ -0.62
ZEB1-223ENST00000561304 NALCNQ8IZF0 1738 aa11.19□□□□□ -0.62
ZEB1-223ENST00000561304 MIER1Q8N108 512 aa11.19□□□□□ -0.62
ZEB1-223ENST00000561304 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
ZEB1-223ENST00000561304 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
ZEB1-223ENST00000561304 TBX22Q9Y458 520 aa11.17□□□□□ -0.62
ZEB1-223ENST00000561304 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
ZEB1-223ENST00000561304 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
ZEB1-223ENST00000561304 TRIM52Q96A61 297 aa11.16□□□□□ -0.62
ZEB1-223ENST00000561304 COL16A1Q07092 1604 aaPredicted RBP11.15□□□□□ -0.62
ZEB1-223ENST00000561304 PIK3R4Q99570 1358 aa11.15□□□□□ -0.62
ZEB1-223ENST00000561304 FAM135BQ49AJ0 1406 aa11.15□□□□□ -0.62
ZEB1-223ENST00000561304 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.63
ZEB1-223ENST00000561304 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.63
ZEB1-223ENST00000561304 METP08581 1390 aa11.14□□□□□ -0.63
ZEB1-223ENST00000561304 MSH6P52701 1360 aa11.14□□□□□ -0.63
ZEB1-223ENST00000561304 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
ZEB1-223ENST00000561304 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
ZEB1-223ENST00000561304 NCOA3Q9Y6Q9 1424 aa11.12□□□□□ -0.63
ZEB1-223ENST00000561304 NHSL1Q5SYE7 1610 aa11.12□□□□□ -0.63
ZEB1-223ENST00000561304 AHDC1Q5TGY3 1603 aaPredicted RBP11.11□□□□□ -0.63
ZEB1-223ENST00000561304 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
ZEB1-223ENST00000561304 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
ZEB1-223ENST00000561304 ASXL1Q8IXJ9 1541 aa11.1□□□□□ -0.63
ZEB1-223ENST00000561304 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
ZEB1-223ENST00000561304 KNDC1Q76NI1 1749 aa11.1□□□□□ -0.63
ZEB1-223ENST00000561304 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
ZEB1-223ENST00000561304 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
ZEB1-223ENST00000561304 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
ZEB1-223ENST00000561304 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
ZEB1-223ENST00000561304 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
ZEB1-223ENST00000561304 DCCP43146 1447 aa11.08□□□□□ -0.64
ZEB1-223ENST00000561304 MST1RQ04912 1400 aa11.08□□□□□ -0.64
ZEB1-223ENST00000561304 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.64
ZEB1-223ENST00000561304 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
ZEB1-223ENST00000561304 PTCH1Q13635 1447 aa11.07□□□□□ -0.64
ZEB1-223ENST00000561304 PRAG1Q86YV5 1406 aa11.07□□□□□ -0.64
ZEB1-223ENST00000561304 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
ZEB1-223ENST00000561304 ROBO2Q9HCK4 1378 aa11.06□□□□□ -0.64
ZEB1-223ENST00000561304 SOCS7O14512 581 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 C19orf44Q9H6X5 657 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 LRP6O75581 1613 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 LAMC1P11047 1609 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 ADGRF5Q8IZF2 1346 aa11.05□□□□□ -0.64
ZEB1-223ENST00000561304 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
ZEB1-223ENST00000561304 RGPD8O14715 1765 aaPredicted RBP11.04□□□□□ -0.64
ZEB1-223ENST00000561304 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
ZEB1-223ENST00000561304 PIK3C2GO75747 1445 aa11.03□□□□□ -0.64
ZEB1-223ENST00000561304 ATF3P18847 181 aa11.03□□□□□ -0.64
ZEB1-223ENST00000561304 CADPS2Q86UW7 1296 aa11.03□□□□□ -0.64
ZEB1-223ENST00000561304 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
ZEB1-223ENST00000561304 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
ZEB1-223ENST00000561304 NRXN1Q9ULB1 1477 aa11.02□□□□□ -0.65
ZEB1-223ENST00000561304 FMN2Q9NZ56 1722 aa11.02□□□□□ -0.65
ZEB1-223ENST00000561304 CDC42BPGQ6DT37 1551 aa11.02□□□□□ -0.65
ZEB1-223ENST00000561304 JCADQ9P266 1359 aa11.01□□□□□ -0.65
ZEB1-223ENST00000561304 MYOM2P54296 1465 aa11.01□□□□□ -0.65
ZEB1-223ENST00000561304 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
ZEB1-223ENST00000561304 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
ZEB1-223ENST00000561304 TECPR2O15040 1411 aa11□□□□□ -0.65
ZEB1-223ENST00000561304 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
ZEB1-223ENST00000561304 DDX17Q92841 729 aaKnown RBP10.99□□□□□ -0.65
ZEB1-223ENST00000561304 PLEKHH1Q9ULM0 1364 aa10.98□□□□□ -0.65
ZEB1-223ENST00000561304 LRPPRCP42704 1394 aaKnown RBP10.97□□□□□ -0.65
ZEB1-223ENST00000561304 YTHDC2Q9H6S0 1430 aaKnown RBP10.97□□□□□ -0.65
ZEB1-223ENST00000561304 ADGRB1O14514 1584 aa10.97□□□□□ -0.65
ZEB1-223ENST00000561304 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
ZEB1-223ENST00000561304 TMEM132EQ6IEE7 984 aa10.96□□□□□ -0.65
ZEB1-223ENST00000561304 POTEAQ6S8J7 498 aa10.96□□□□□ -0.65
ZEB1-223ENST00000561304 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
ZEB1-223ENST00000561304 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
ZEB1-223ENST00000561304 ARHGEF28Q8N1W1 1705 aaKnown RBP10.96□□□□□ -0.66
ZEB1-223ENST00000561304 COL22A1Q8NFW1 1626 aaPredicted RBP10.96□□□□□ -0.66
ZEB1-223ENST00000561304 STK26Q9P289 416 aa10.95□□□□□ -0.66
ZEB1-223ENST00000561304 USP32Q8NFA0 1604 aa10.95□□□□□ -0.66
ZEB1-223ENST00000561304 CLCN6P51797 869 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 WAPLQ7Z5K2 1190 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
ZEB1-223ENST00000561304 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 KIF1AQ12756 1690 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
ZEB1-223ENST00000561304 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
ZEB1-223ENST00000561304 PXDNQ92626 1479 aa10.93□□□□□ -0.66
ZEB1-223ENST00000561304 NUBP1P53384 320 aa10.93□□□□□ -0.66
ZEB1-223ENST00000561304 ADGRB2O60241 1585 aa10.93□□□□□ -0.66
ZEB1-223ENST00000561304 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
ZEB1-223ENST00000561304 DLC1Q96QB1 1528 aa10.92□□□□□ -0.66
ZEB1-223ENST00000561304 CFAP70Q5T0N1 1121 aa10.92□□□□□ -0.66
ZEB1-223ENST00000561304 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
ZEB1-223ENST00000561304 C14orf93Q9H972 538 aaKnown RBP10.92□□□□□ -0.66
ZEB1-223ENST00000561304 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
ZEB1-223ENST00000561304 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
ZEB1-223ENST00000561304 KIAA1210Q9ULL0 1709 aa10.91□□□□□ -0.66
ZEB1-223ENST00000561304 NUTM2BA6NNL0 878 aaPredicted RBP10.9□□□□□ -0.66
ZEB1-223ENST00000561304 NUTM2EB1AL46 878 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms