RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 HRO43593 1189 aa13.14□□□□□ -0.31
SCG3-203ENST00000558709 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
SCG3-203ENST00000558709 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
SCG3-203ENST00000558709 MMRN1Q13201 1228 aa13.13□□□□□ -0.31
SCG3-203ENST00000558709 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
SCG3-203ENST00000558709 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
SCG3-203ENST00000558709 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
SCG3-203ENST00000558709 ATP10AO60312 1499 aa13.12□□□□□ -0.31
SCG3-203ENST00000558709 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
SCG3-203ENST00000558709 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
SCG3-203ENST00000558709 SUPT6HQ7KZ85 1726 aaKnown RBP13.11□□□□□ -0.31
SCG3-203ENST00000558709 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
SCG3-203ENST00000558709 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
SCG3-203ENST00000558709 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
SCG3-203ENST00000558709 SCAPERQ9BY12 1400 aa13.11□□□□□ -0.31
SCG3-203ENST00000558709 MAP3K7O43318 606 aa13.1□□□□□ -0.31
SCG3-203ENST00000558709 CEBPAP49715 358 aaPredicted RBP13.1□□□□□ -0.31
SCG3-203ENST00000558709 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
SCG3-203ENST00000558709 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
SCG3-203ENST00000558709 KDM5CP41229 1560 aa13.09□□□□□ -0.31
SCG3-203ENST00000558709 KIF14Q15058 1648 aa13.09□□□□□ -0.31
SCG3-203ENST00000558709 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
SCG3-203ENST00000558709 CDC42BPBQ9Y5S2 1711 aa13.08□□□□□ -0.32
SCG3-203ENST00000558709 PTPRTO14522 1441 aa13.07□□□□□ -0.32
SCG3-203ENST00000558709 PLCH2O75038 1416 aa13.07□□□□□ -0.32
SCG3-203ENST00000558709 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
SCG3-203ENST00000558709 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
SCG3-203ENST00000558709 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
SCG3-203ENST00000558709 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
SCG3-203ENST00000558709 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
SCG3-203ENST00000558709 ZNF518AQ6AHZ1 1483 aa13.05□□□□□ -0.32
SCG3-203ENST00000558709 PROX2Q3B8N5 592 aa13.05□□□□□ -0.32
SCG3-203ENST00000558709 ITSN2Q9NZM3 1697 aa13.04□□□□□ -0.32
SCG3-203ENST00000558709 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
SCG3-203ENST00000558709 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
SCG3-203ENST00000558709 NPDC1Q9NQX5 325 aaPredicted RBP13.03□□□□□ -0.32
SCG3-203ENST00000558709 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
SCG3-203ENST00000558709 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.33
SCG3-203ENST00000558709 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
SCG3-203ENST00000558709 CAMSAP1Q5T5Y3 1602 aa13.01□□□□□ -0.33
SCG3-203ENST00000558709 ZNF142P52746 1687 aaPredicted RBP13.01□□□□□ -0.33
SCG3-203ENST00000558709 KIDINS220Q9ULH0 1771 aa13.01□□□□□ -0.33
SCG3-203ENST00000558709 PREX2Q70Z35 1606 aa13□□□□□ -0.33
SCG3-203ENST00000558709 TRIM6-TRIM34B2RNG4 842 aa13□□□□□ -0.33
SCG3-203ENST00000558709 RABGEF1Q9UJ41 708 aa13□□□□□ -0.33
SCG3-203ENST00000558709 AGLP35573 1532 aa12.98□□□□□ -0.33
SCG3-203ENST00000558709 RNF166Q96A37 237 aaPredicted RBP12.98□□□□□ -0.33
SCG3-203ENST00000558709 TSKSQ9UJT2 592 aa12.98□□□□□ -0.33
SCG3-203ENST00000558709 CDC42BPAQ5VT25 1732 aa12.98□□□□□ -0.33
SCG3-203ENST00000558709 MYO3AQ8NEV4 1616 aa12.98□□□□□ -0.33
SCG3-203ENST00000558709 CLTCQ00610 1675 aaKnown RBP12.97□□□□□ -0.33
SCG3-203ENST00000558709 EFCAB2Q5VUJ9 269 aa12.97□□□□□ -0.33
SCG3-203ENST00000558709 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
SCG3-203ENST00000558709 FAM198AQ9UFP1 575 aa12.97□□□□□ -0.33
SCG3-203ENST00000558709 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
SCG3-203ENST00000558709 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
SCG3-203ENST00000558709 PRSS12P56730 875 aa12.96□□□□□ -0.33
SCG3-203ENST00000558709 TTC13Q8NBP0 860 aa12.96□□□□□ -0.33
SCG3-203ENST00000558709 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
SCG3-203ENST00000558709 ABCC1P33527 1531 aa12.96□□□□□ -0.33
SCG3-203ENST00000558709 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
SCG3-203ENST00000558709 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
SCG3-203ENST00000558709 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
SCG3-203ENST00000558709 PTGDRQ13258 359 aa12.94□□□□□ -0.34
SCG3-203ENST00000558709 SMYD5Q6GMV2 418 aa12.94□□□□□ -0.34
SCG3-203ENST00000558709 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
SCG3-203ENST00000558709 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
SCG3-203ENST00000558709 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
SCG3-203ENST00000558709 EEA1Q15075 1411 aa12.92□□□□□ -0.34
SCG3-203ENST00000558709 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
SCG3-203ENST00000558709 CNTLNQ9NXG0 1405 aa12.92□□□□□ -0.34
SCG3-203ENST00000558709 ZNF335Q9H4Z2 1342 aaPredicted RBP12.91□□□□□ -0.34
SCG3-203ENST00000558709 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
SCG3-203ENST00000558709 TROQ12816 1431 aaPredicted RBP12.91□□□□□ -0.34
SCG3-203ENST00000558709 C3orf80F5H4A9 247 aa12.91□□□□□ -0.34
SCG3-203ENST00000558709 GPR37O15354 613 aa12.91□□□□□ -0.34
SCG3-203ENST00000558709 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.34
SCG3-203ENST00000558709 ESF1Q9H501 851 aaKnown RBP12.9□□□□□ -0.34
SCG3-203ENST00000558709 CLIP1P30622 1438 aa12.89□□□□□ -0.35
SCG3-203ENST00000558709 NPATQ14207 1427 aa12.89□□□□□ -0.35
SCG3-203ENST00000558709 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
SCG3-203ENST00000558709 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
SCG3-203ENST00000558709 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
SCG3-203ENST00000558709 ATP1B4Q9UN42 357 aaPredicted RBP12.89□□□□□ -0.35
SCG3-203ENST00000558709 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
SCG3-203ENST00000558709 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
SCG3-203ENST00000558709 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
SCG3-203ENST00000558709 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
SCG3-203ENST00000558709 ARHGAP35Q9NRY4 1499 aa12.87□□□□□ -0.35
SCG3-203ENST00000558709 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
SCG3-203ENST00000558709 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
SCG3-203ENST00000558709 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
SCG3-203ENST00000558709 FCHSD2O94868 740 aa12.85□□□□□ -0.35
SCG3-203ENST00000558709 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
SCG3-203ENST00000558709 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
SCG3-203ENST00000558709 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
SCG3-203ENST00000558709 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
SCG3-203ENST00000558709 SYCP2Q9BX26 1530 aa12.84□□□□□ -0.35
SCG3-203ENST00000558709 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
SCG3-203ENST00000558709 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms