RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 DCCP43146 1447 aa18.11■□□□□ 0.49
SLIRP-211ENST00000557623 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
SLIRP-211ENST00000557623 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
SLIRP-211ENST00000557623 ATF3P18847 181 aa18.1■□□□□ 0.49
SLIRP-211ENST00000557623 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
SLIRP-211ENST00000557623 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
SLIRP-211ENST00000557623 ADGRL3Q9HAR2 1447 aa18.09■□□□□ 0.49
SLIRP-211ENST00000557623 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
SLIRP-211ENST00000557623 ABCB7O75027 752 aa18.09■□□□□ 0.49
SLIRP-211ENST00000557623 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
SLIRP-211ENST00000557623 TECPR2O15040 1411 aa18.08■□□□□ 0.49
SLIRP-211ENST00000557623 YTHDC2Q9H6S0 1430 aaKnown RBP18.08■□□□□ 0.49
SLIRP-211ENST00000557623 ABCC11Q96J66 1382 aa18.08■□□□□ 0.49
SLIRP-211ENST00000557623 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
SLIRP-211ENST00000557623 SLAIN2Q9P270 581 aa18.08■□□□□ 0.48
SLIRP-211ENST00000557623 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
SLIRP-211ENST00000557623 STK26Q9P289 416 aa18.07■□□□□ 0.48
SLIRP-211ENST00000557623 HSPA1LP34931 641 aa18.05■□□□□ 0.48
SLIRP-211ENST00000557623 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
SLIRP-211ENST00000557623 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
SLIRP-211ENST00000557623 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
SLIRP-211ENST00000557623 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
SLIRP-211ENST00000557623 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
SLIRP-211ENST00000557623 DLC1Q96QB1 1528 aa18.03■□□□□ 0.48
SLIRP-211ENST00000557623 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
SLIRP-211ENST00000557623 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
SLIRP-211ENST00000557623 MST1RQ04912 1400 aa18■□□□□ 0.47
SLIRP-211ENST00000557623 POLA2Q14181 598 aa18■□□□□ 0.47
SLIRP-211ENST00000557623 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
SLIRP-211ENST00000557623 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
SLIRP-211ENST00000557623 PLEKHH1Q9ULM0 1364 aa17.96■□□□□ 0.47
SLIRP-211ENST00000557623 ARHGEF28Q8N1W1 1705 aaKnown RBP17.96■□□□□ 0.47
SLIRP-211ENST00000557623 POGKQ9P215 609 aa17.96■□□□□ 0.47
SLIRP-211ENST00000557623 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
SLIRP-211ENST00000557623 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
SLIRP-211ENST00000557623 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
SLIRP-211ENST00000557623 FMN2Q9NZ56 1722 aa17.95■□□□□ 0.46
SLIRP-211ENST00000557623 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
SLIRP-211ENST00000557623 TRPM1Q7Z4N2 1603 aa17.94■□□□□ 0.46
SLIRP-211ENST00000557623 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
SLIRP-211ENST00000557623 BRINP3Q76B58 766 aa17.94■□□□□ 0.46
SLIRP-211ENST00000557623 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
SLIRP-211ENST00000557623 COL16A1Q07092 1604 aaPredicted RBP17.92■□□□□ 0.46
SLIRP-211ENST00000557623 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
SLIRP-211ENST00000557623 RGPD8O14715 1765 aaPredicted RBP17.9■□□□□ 0.46
SLIRP-211ENST00000557623 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
SLIRP-211ENST00000557623 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
SLIRP-211ENST00000557623 NBPF1Q3BBV0 1214 aa17.89■□□□□ 0.45
SLIRP-211ENST00000557623 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
SLIRP-211ENST00000557623 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
SLIRP-211ENST00000557623 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
SLIRP-211ENST00000557623 ESCO1Q5FWF5 840 aa17.86■□□□□ 0.45
SLIRP-211ENST00000557623 ORAI2Q96SN7 254 aa17.86■□□□□ 0.45
SLIRP-211ENST00000557623 EIF3AQ14152 1382 aaKnown RBP17.86■□□□□ 0.45
SLIRP-211ENST00000557623 JCADQ9P266 1359 aa17.86■□□□□ 0.45
SLIRP-211ENST00000557623 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
SLIRP-211ENST00000557623 MINK1Q8N4C8 1332 aaPredicted RBP17.84■□□□□ 0.45
SLIRP-211ENST00000557623 NUTM2FA1L443 756 aa17.84■□□□□ 0.45
SLIRP-211ENST00000557623 QRICH2Q9H0J4 1663 aa17.83■□□□□ 0.45
SLIRP-211ENST00000557623 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.45
SLIRP-211ENST00000557623 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
SLIRP-211ENST00000557623 NPHP3Q7Z494 1330 aa17.82■□□□□ 0.44
SLIRP-211ENST00000557623 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
SLIRP-211ENST00000557623 NBPF8Q3BBV2 869 aa17.82■□□□□ 0.44
SLIRP-211ENST00000557623 LRRC59Q96AG4 307 aaKnown RBP17.82■□□□□ 0.44
SLIRP-211ENST00000557623 HIRIP3Q9BW71 556 aaPredicted RBP17.82■□□□□ 0.44
SLIRP-211ENST00000557623 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
SLIRP-211ENST00000557623 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
SLIRP-211ENST00000557623 TULP4Q9NRJ4 1543 aa17.81■□□□□ 0.44
SLIRP-211ENST00000557623 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
SLIRP-211ENST00000557623 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
SLIRP-211ENST00000557623 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
SLIRP-211ENST00000557623 TIMELESSQ9UNS1 1208 aa17.8■□□□□ 0.44
SLIRP-211ENST00000557623 RALGAPBQ86X10 1494 aa17.8■□□□□ 0.44
SLIRP-211ENST00000557623 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
SLIRP-211ENST00000557623 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
SLIRP-211ENST00000557623 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
SLIRP-211ENST00000557623 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
SLIRP-211ENST00000557623 FOXO3O43524 673 aa17.77■□□□□ 0.44
SLIRP-211ENST00000557623 ZBTB12Q9Y330 459 aaPredicted RBP17.77■□□□□ 0.44
SLIRP-211ENST00000557623 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
SLIRP-211ENST00000557623 PXDNQ92626 1479 aa17.75■□□□□ 0.43
SLIRP-211ENST00000557623 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
SLIRP-211ENST00000557623 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
SLIRP-211ENST00000557623 PSME1Q06323 249 aa17.73■□□□□ 0.43
SLIRP-211ENST00000557623 PNPLA6Q8IY17 1366 aa17.73■□□□□ 0.43
SLIRP-211ENST00000557623 ATP7BP35670 1465 aa17.73■□□□□ 0.43
SLIRP-211ENST00000557623 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
SLIRP-211ENST00000557623 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
SLIRP-211ENST00000557623 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
SLIRP-211ENST00000557623 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
SLIRP-211ENST00000557623 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.43
SLIRP-211ENST00000557623 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
SLIRP-211ENST00000557623 XPCQ01831 940 aaPredicted RBP17.7■□□□□ 0.42
SLIRP-211ENST00000557623 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
SLIRP-211ENST00000557623 LRP6O75581 1613 aa17.69■□□□□ 0.42
SLIRP-211ENST00000557623 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
SLIRP-211ENST00000557623 CCDC61Q9Y6R9 512 aa17.69■□□□□ 0.42
SLIRP-211ENST00000557623 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
SLIRP-211ENST00000557623 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms