RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
MTHFD1-206ENST00000554353 HPS5Q9UPZ3 1129 aa9.31□□□□□ -0.92
MTHFD1-206ENST00000554353 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
MTHFD1-206ENST00000554353 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
MTHFD1-206ENST00000554353 MCM6Q14566 821 aa9.3□□□□□ -0.92
MTHFD1-206ENST00000554353 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-206ENST00000554353 ZBTB3Q9H5J0 574 aa9.3□□□□□ -0.92
MTHFD1-206ENST00000554353 PCDHGC3Q9UN70 934 aa9.3□□□□□ -0.92
MTHFD1-206ENST00000554353 HRCP23327 699 aa9.29□□□□□ -0.92
MTHFD1-206ENST00000554353 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-206ENST00000554353 PUS10Q3MIT2 529 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-206ENST00000554353 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
MTHFD1-206ENST00000554353 PRPF38BQ5VTL8 546 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-206ENST00000554353 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
MTHFD1-206ENST00000554353 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-206ENST00000554353 C6orf229H3BNL8 230 aa9.27□□□□□ -0.93
MTHFD1-206ENST00000554353 ACTN4O43707 911 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-206ENST00000554353 AP1G2O75843 785 aa9.27□□□□□ -0.93
MTHFD1-206ENST00000554353 PRR14Q9BWN1 585 aa9.27□□□□□ -0.93
MTHFD1-206ENST00000554353 SNRKQ9NRH2 765 aa9.27□□□□□ -0.93
MTHFD1-206ENST00000554353 MTMR2Q13614 643 aa9.26□□□□□ -0.93
MTHFD1-206ENST00000554353 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
MTHFD1-206ENST00000554353 APLP1P51693 650 aa9.25□□□□□ -0.93
MTHFD1-206ENST00000554353 TSC1Q92574 1164 aa9.25□□□□□ -0.93
MTHFD1-206ENST00000554353 SYMPKQ92797 1274 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-206ENST00000554353 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
MTHFD1-206ENST00000554353 SPDYE5A6NIY4 337 aa9.24□□□□□ -0.93
MTHFD1-206ENST00000554353 MORN1Q5T089 497 aa9.24□□□□□ -0.93
MTHFD1-206ENST00000554353 PTPN5P54829 565 aa9.23□□□□□ -0.93
MTHFD1-206ENST00000554353 ARXQ96QS3 562 aa9.23□□□□□ -0.93
MTHFD1-206ENST00000554353 WBP1LQ9NX94 342 aa9.23□□□□□ -0.93
MTHFD1-206ENST00000554353 SLC27A5Q9Y2P5 690 aa9.23□□□□□ -0.93
MTHFD1-206ENST00000554353 MYO15BQ96JP2 1530 aa9.22□□□□□ -0.93
MTHFD1-206ENST00000554353 RAD21O60216 631 aa9.22□□□□□ -0.93
MTHFD1-206ENST00000554353 PCDHB3Q9Y5E6 796 aa9.22□□□□□ -0.93
MTHFD1-206ENST00000554353 USP17L8P0C7I0 530 aa9.21□□□□□ -0.94
MTHFD1-206ENST00000554353 POM121Q96HA1 1249 aa9.21□□□□□ -0.94
MTHFD1-206ENST00000554353 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
MTHFD1-206ENST00000554353 Q3C1V9 767 aa9.2□□□□□ -0.94
MTHFD1-206ENST00000554353 MTMR14Q8NCE2 650 aa9.2□□□□□ -0.94
MTHFD1-206ENST00000554353 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
MTHFD1-206ENST00000554353 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
MTHFD1-206ENST00000554353 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
MTHFD1-206ENST00000554353 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
MTHFD1-206ENST00000554353 A6NJR5 290 aa9.18□□□□□ -0.94
MTHFD1-206ENST00000554353 BLOC1S3Q6QNY0 202 aa9.18□□□□□ -0.94
MTHFD1-206ENST00000554353 RNF19BQ6ZMZ0 732 aa9.18□□□□□ -0.94
MTHFD1-206ENST00000554353 NR1I2O75469 434 aa9.17□□□□□ -0.94
MTHFD1-206ENST00000554353 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
MTHFD1-206ENST00000554353 SCUBE3Q8IX30 993 aa9.17□□□□□ -0.94
MTHFD1-206ENST00000554353 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
MTHFD1-206ENST00000554353 APBB1O00213 710 aa9.16□□□□□ -0.94
MTHFD1-206ENST00000554353 COPS2P61201 443 aa9.16□□□□□ -0.94
MTHFD1-206ENST00000554353 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
MTHFD1-206ENST00000554353 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
MTHFD1-206ENST00000554353 LRRN4Q8WUT4 740 aa9.15□□□□□ -0.94
MTHFD1-206ENST00000554353 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
MTHFD1-206ENST00000554353 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
MTHFD1-206ENST00000554353 ARID3CA6NKF2 412 aa9.14□□□□□ -0.95
MTHFD1-206ENST00000554353 TRAK2O60296 914 aa9.14□□□□□ -0.95
MTHFD1-206ENST00000554353 IFFO2Q5TF58 517 aa9.14□□□□□ -0.95
MTHFD1-206ENST00000554353 BRICD5Q6PL45 260 aa9.14□□□□□ -0.95
MTHFD1-206ENST00000554353 USB1Q9BQ65 265 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-206ENST00000554353 ABL2P42684 1182 aa9.13□□□□□ -0.95
MTHFD1-206ENST00000554353 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-206ENST00000554353 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-206ENST00000554353 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
MTHFD1-206ENST00000554353 SALL2Q9Y467 1007 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-206ENST00000554353 PER1O15534 1290 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-206ENST00000554353 Q6ZNB5 142 aa9.11□□□□□ -0.95
MTHFD1-206ENST00000554353 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
MTHFD1-206ENST00000554353 THAP11Q96EK4 314 aa9.11□□□□□ -0.95
MTHFD1-206ENST00000554353 SOCS7O14512 581 aa9.1□□□□□ -0.95
MTHFD1-206ENST00000554353 GJD4Q96KN9 370 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-206ENST00000554353 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-206ENST00000554353 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
MTHFD1-206ENST00000554353 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
MTHFD1-206ENST00000554353 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
MTHFD1-206ENST00000554353 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
MTHFD1-206ENST00000554353 SPSB2Q99619 263 aa9.09□□□□□ -0.95
MTHFD1-206ENST00000554353 MTRQ99707 1265 aa9.09□□□□□ -0.95
MTHFD1-206ENST00000554353 NR6A1Q15406 480 aa9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 EPS8L1Q8TE68 723 aa9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 ARID3AQ99856 593 aa9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 TRIM34Q9BYJ4 488 aa9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 ZNF330Q9Y3S2 320 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-206ENST00000554353 A0A0G2JS52 829 aa9.07□□□□□ -0.96
MTHFD1-206ENST00000554353 TLL1O43897 1013 aa9.07□□□□□ -0.96
MTHFD1-206ENST00000554353 JUNDP17535 347 aa9.07□□□□□ -0.96
MTHFD1-206ENST00000554353 LYPD8Q6UX82 237 aa9.07□□□□□ -0.96
MTHFD1-206ENST00000554353 ZPR1O75312 459 aa9.06□□□□□ -0.96
MTHFD1-206ENST00000554353 FAM160A2Q8N612 972 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-206ENST00000554353 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
MTHFD1-206ENST00000554353 PRDM9Q9NQV7 894 aa9.05□□□□□ -0.96
MTHFD1-206ENST00000554353 ADH1BP00325 375 aa9.04□□□□□ -0.96
MTHFD1-206ENST00000554353 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
MTHFD1-206ENST00000554353 TJAP1Q5JTD0 557 aa9.04□□□□□ -0.96
MTHFD1-206ENST00000554353 ZNF516Q92618 1163 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms