RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
USP15-211ENST00000549101 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
USP15-211ENST00000549101 GJA5P36382 358 aa12.69□□□□□ -0.38
USP15-211ENST00000549101 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
USP15-211ENST00000549101 FAM160A2Q8N612 972 aaPredicted RBP12.68□□□□□ -0.38
USP15-211ENST00000549101 SLC6A16Q9GZN6 736 aa12.67□□□□□ -0.38
USP15-211ENST00000549101 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
USP15-211ENST00000549101 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
USP15-211ENST00000549101 S1PR4O95977 384 aa12.66□□□□□ -0.38
USP15-211ENST00000549101 USB1Q9BQ65 265 aaKnown RBP12.66□□□□□ -0.38
USP15-211ENST00000549101 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.66□□□□□ -0.38
USP15-211ENST00000549101 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
USP15-211ENST00000549101 GGCXP38435 758 aa12.64□□□□□ -0.39
USP15-211ENST00000549101 SKIV2LQ15477 1246 aaKnown RBP12.64□□□□□ -0.39
USP15-211ENST00000549101 CLK2P49760 499 aaKnown RBP12.63□□□□□ -0.39
USP15-211ENST00000549101 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
USP15-211ENST00000549101 MSS51Q4VC12 460 aa12.62□□□□□ -0.39
USP15-211ENST00000549101 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
USP15-211ENST00000549101 RETREG3Q86VR2 466 aa12.62□□□□□ -0.39
USP15-211ENST00000549101 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
USP15-211ENST00000549101 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
USP15-211ENST00000549101 MTMR2Q13614 643 aa12.61□□□□□ -0.39
USP15-211ENST00000549101 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
USP15-211ENST00000549101 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
USP15-211ENST00000549101 HRCP23327 699 aa12.6□□□□□ -0.39
USP15-211ENST00000549101 PROCA1Q8NCQ7 364 aaPredicted RBP12.6□□□□□ -0.39
USP15-211ENST00000549101 QPCTQ16769 361 aa12.59□□□□□ -0.39
USP15-211ENST00000549101 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
USP15-211ENST00000549101 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
USP15-211ENST00000549101 PRPF38BQ5VTL8 546 aaKnown RBP12.58□□□□□ -0.4
USP15-211ENST00000549101 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
USP15-211ENST00000549101 LILRB3O75022 631 aa12.57□□□□□ -0.4
USP15-211ENST00000549101 GOPCQ9HD26 462 aa12.57□□□□□ -0.4
USP15-211ENST00000549101 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
USP15-211ENST00000549101 MMP16P51512 607 aa12.56□□□□□ -0.4
USP15-211ENST00000549101 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
USP15-211ENST00000549101 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
USP15-211ENST00000549101 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
USP15-211ENST00000549101 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
USP15-211ENST00000549101 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
USP15-211ENST00000549101 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
USP15-211ENST00000549101 DXOO77932 396 aaKnown RBP12.54□□□□□ -0.4
USP15-211ENST00000549101 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP15-211ENST00000549101 RTL5Q5HYW3 569 aaPredicted RBP12.53□□□□□ -0.4
USP15-211ENST00000549101 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
USP15-211ENST00000549101 JUNDP17535 347 aa12.52□□□□□ -0.41
USP15-211ENST00000549101 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
USP15-211ENST00000549101 FCF1Q9Y324 198 aaKnown RBP12.52□□□□□ -0.41
USP15-211ENST00000549101 RGS20O76081 388 aa12.51□□□□□ -0.41
USP15-211ENST00000549101 PCMTD1Q96MG8 357 aaPredicted RBP12.51□□□□□ -0.41
USP15-211ENST00000549101 PLA2G2CQ5R387 149 aa12.5□□□□□ -0.41
USP15-211ENST00000549101 DESI1Q6ICB0 168 aa12.49□□□□□ -0.41
USP15-211ENST00000549101 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
USP15-211ENST00000549101 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
USP15-211ENST00000549101 PPP2R2DQ66LE6 453 aa12.47□□□□□ -0.41
USP15-211ENST00000549101 CCDC24Q8N4L8 307 aa12.46□□□□□ -0.41
USP15-211ENST00000549101 TSC1Q92574 1164 aa12.46□□□□□ -0.41
USP15-211ENST00000549101 SLC19A1P41440 591 aa12.45□□□□□ -0.42
USP15-211ENST00000549101 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
USP15-211ENST00000549101 NUDT12Q9BQG2 462 aa12.45□□□□□ -0.42
USP15-211ENST00000549101 LYPD8Q6UX82 237 aa12.44□□□□□ -0.42
USP15-211ENST00000549101 V9GY48 417 aaPredicted RBP12.44□□□□□ -0.42
USP15-211ENST00000549101 PTPRNQ16849 979 aa12.43□□□□□ -0.42
USP15-211ENST00000549101 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
USP15-211ENST00000549101 CCNYL3P0C7X3 344 aa12.41□□□□□ -0.42
USP15-211ENST00000549101 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
USP15-211ENST00000549101 EVA1BQ9NVM1 165 aa12.41□□□□□ -0.42
USP15-211ENST00000549101 RFC5P40937 340 aa12.4□□□□□ -0.42
USP15-211ENST00000549101 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
USP15-211ENST00000549101 ZBTB24O43167 697 aaPredicted RBP12.39□□□□□ -0.43
USP15-211ENST00000549101 RPIAP49247 311 aa12.39□□□□□ -0.43
USP15-211ENST00000549101 SPRYD7Q5W111 196 aa12.39□□□□□ -0.43
USP15-211ENST00000549101 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
USP15-211ENST00000549101 KCNH2Q12809 1159 aa12.37□□□□□ -0.43
USP15-211ENST00000549101 AP1G2O75843 785 aa12.36□□□□□ -0.43
USP15-211ENST00000549101 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
USP15-211ENST00000549101 CTHP32929 405 aa12.34□□□□□ -0.43
USP15-211ENST00000549101 ZNF598Q86UK7 904 aaKnown RBP12.34□□□□□ -0.43
USP15-211ENST00000549101 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
USP15-211ENST00000549101 TMEM259Q4ZIN3 620 aa12.33□□□□□ -0.44
USP15-211ENST00000549101 LRRN4Q8WUT4 740 aa12.33□□□□□ -0.44
USP15-211ENST00000549101 MAP10Q9P2G4 905 aa12.33□□□□□ -0.44
USP15-211ENST00000549101 TRIM32Q13049 653 aa12.32□□□□□ -0.44
USP15-211ENST00000549101 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
USP15-211ENST00000549101 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
USP15-211ENST00000549101 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
USP15-211ENST00000549101 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
USP15-211ENST00000549101 BAP1Q92560 729 aa12.27□□□□□ -0.45
USP15-211ENST00000549101 SKOR1P84550 965 aa12.26□□□□□ -0.45
USP15-211ENST00000549101 TRIM67Q6ZTA4 783 aa12.25□□□□□ -0.45
USP15-211ENST00000549101 HMX1Q9NP08 348 aaPredicted RBP12.25□□□□□ -0.45
USP15-211ENST00000549101 GDF9O60383 454 aa12.24□□□□□ -0.45
USP15-211ENST00000549101 SH3BP2P78314 561 aa12.24□□□□□ -0.45
USP15-211ENST00000549101 FOXC1Q12948 553 aa12.24□□□□□ -0.45
USP15-211ENST00000549101 NR6A1Q15406 480 aa12.24□□□□□ -0.45
USP15-211ENST00000549101 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
USP15-211ENST00000549101 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
USP15-211ENST00000549101 WNT7BP56706 349 aa12.23□□□□□ -0.45
USP15-211ENST00000549101 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
USP15-211ENST00000549101 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms