RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 SH3D19Q5HYK7 790 aa11.92□□□□□ -0.5
USP15-209ENST00000548620 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
USP15-209ENST00000548620 A0A0G2JS52 829 aa11.9□□□□□ -0.5
USP15-209ENST00000548620 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
USP15-209ENST00000548620 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
USP15-209ENST00000548620 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
USP15-209ENST00000548620 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
USP15-209ENST00000548620 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
USP15-209ENST00000548620 SKIV2LQ15477 1246 aaKnown RBP11.88□□□□□ -0.51
USP15-209ENST00000548620 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
USP15-209ENST00000548620 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
USP15-209ENST00000548620 USB1Q9BQ65 265 aaKnown RBP11.87□□□□□ -0.51
USP15-209ENST00000548620 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
USP15-209ENST00000548620 S1PR4O95977 384 aa11.86□□□□□ -0.51
USP15-209ENST00000548620 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
USP15-209ENST00000548620 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
USP15-209ENST00000548620 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
USP15-209ENST00000548620 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
USP15-209ENST00000548620 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
USP15-209ENST00000548620 PRDM9Q9NQV7 894 aa11.85□□□□□ -0.51
USP15-209ENST00000548620 HRCP23327 699 aa11.84□□□□□ -0.51
USP15-209ENST00000548620 MTMR2Q13614 643 aa11.84□□□□□ -0.51
USP15-209ENST00000548620 QPCTQ16769 361 aa11.84□□□□□ -0.51
USP15-209ENST00000548620 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
USP15-209ENST00000548620 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.84□□□□□ -0.51
USP15-209ENST00000548620 PROCA1Q8NCQ7 364 aaPredicted RBP11.83□□□□□ -0.52
USP15-209ENST00000548620 CABLES1Q8TDN4 633 aa11.83□□□□□ -0.52
USP15-209ENST00000548620 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
USP15-209ENST00000548620 LILRB3O75022 631 aa11.82□□□□□ -0.52
USP15-209ENST00000548620 GGCXP38435 758 aa11.82□□□□□ -0.52
USP15-209ENST00000548620 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP15-209ENST00000548620 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
USP15-209ENST00000548620 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
USP15-209ENST00000548620 MMP16P51512 607 aa11.8□□□□□ -0.52
USP15-209ENST00000548620 FBXO31Q5XUX0 539 aaPredicted RBP11.79□□□□□ -0.52
USP15-209ENST00000548620 PRR7Q8TB68 274 aa11.79□□□□□ -0.52
USP15-209ENST00000548620 CFAP99D6REC4 459 aa11.78□□□□□ -0.52
USP15-209ENST00000548620 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
USP15-209ENST00000548620 DXOO77932 396 aaKnown RBP11.78□□□□□ -0.52
USP15-209ENST00000548620 PCMTD1Q96MG8 357 aaPredicted RBP11.78□□□□□ -0.52
USP15-209ENST00000548620 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.53
USP15-209ENST00000548620 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.53
USP15-209ENST00000548620 JUNDP17535 347 aa11.77□□□□□ -0.53
USP15-209ENST00000548620 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
USP15-209ENST00000548620 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
USP15-209ENST00000548620 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.53
USP15-209ENST00000548620 ANKLE1Q8NAG6 615 aa11.76□□□□□ -0.53
USP15-209ENST00000548620 PPP2R2DQ66LE6 453 aa11.75□□□□□ -0.53
USP15-209ENST00000548620 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
USP15-209ENST00000548620 DESI1Q6ICB0 168 aa11.74□□□□□ -0.53
USP15-209ENST00000548620 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
USP15-209ENST00000548620 PLA2G2CQ5R387 149 aa11.72□□□□□ -0.53
USP15-209ENST00000548620 EMID1Q96A84 441 aaPredicted RBP11.7□□□□□ -0.54
USP15-209ENST00000548620 RGS20O76081 388 aa11.69□□□□□ -0.54
USP15-209ENST00000548620 PTPRNQ16849 979 aa11.69□□□□□ -0.54
USP15-209ENST00000548620 RFC5P40937 340 aa11.68□□□□□ -0.54
USP15-209ENST00000548620 LYPD8Q6UX82 237 aa11.68□□□□□ -0.54
USP15-209ENST00000548620 TSC1Q92574 1164 aa11.68□□□□□ -0.54
USP15-209ENST00000548620 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
USP15-209ENST00000548620 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
USP15-209ENST00000548620 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
USP15-209ENST00000548620 CCNYL3P0C7X3 344 aa11.66□□□□□ -0.54
USP15-209ENST00000548620 TMEM132AQ24JP5 1023 aa11.66□□□□□ -0.54
USP15-209ENST00000548620 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
USP15-209ENST00000548620 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
USP15-209ENST00000548620 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
USP15-209ENST00000548620 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
USP15-209ENST00000548620 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
USP15-209ENST00000548620 SLC19A1P41440 591 aa11.63□□□□□ -0.55
USP15-209ENST00000548620 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
USP15-209ENST00000548620 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
USP15-209ENST00000548620 AP1G2O75843 785 aa11.61□□□□□ -0.55
USP15-209ENST00000548620 RPIAP49247 311 aa11.61□□□□□ -0.55
USP15-209ENST00000548620 PTCRAQ6ISU1 281 aaPredicted RBP11.61□□□□□ -0.55
USP15-209ENST00000548620 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
USP15-209ENST00000548620 TMEM259Q4ZIN3 620 aa11.59□□□□□ -0.55
USP15-209ENST00000548620 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
USP15-209ENST00000548620 MAP10Q9P2G4 905 aa11.59□□□□□ -0.55
USP15-209ENST00000548620 ZBTB24O43167 697 aaPredicted RBP11.58□□□□□ -0.56
USP15-209ENST00000548620 USP17L8P0C7I0 530 aa11.58□□□□□ -0.56
USP15-209ENST00000548620 LRRN4Q8WUT4 740 aa11.58□□□□□ -0.56
USP15-209ENST00000548620 CTHP32929 405 aa11.56□□□□□ -0.56
USP15-209ENST00000548620 TRIM32Q13049 653 aa11.56□□□□□ -0.56
USP15-209ENST00000548620 UNC93B1Q9H1C4 597 aa11.56□□□□□ -0.56
USP15-209ENST00000548620 CD2BP2O95400 341 aaKnown RBP11.54□□□□□ -0.56
USP15-209ENST00000548620 ZNF598Q86UK7 904 aaKnown RBP11.54□□□□□ -0.56
USP15-209ENST00000548620 HMX1Q9NP08 348 aaPredicted RBP11.54□□□□□ -0.56
USP15-209ENST00000548620 ZNF697Q5TEC3 545 aa11.53□□□□□ -0.56
USP15-209ENST00000548620 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
USP15-209ENST00000548620 SKOR1P84550 965 aa11.5□□□□□ -0.57
USP15-209ENST00000548620 NR6A1Q15406 480 aa11.49□□□□□ -0.57
USP15-209ENST00000548620 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
USP15-209ENST00000548620 EPS8L1Q8TE68 723 aa11.49□□□□□ -0.57
USP15-209ENST00000548620 BAP1Q92560 729 aa11.49□□□□□ -0.57
USP15-209ENST00000548620 WNT7BP56706 349 aa11.48□□□□□ -0.57
USP15-209ENST00000548620 LINC01559Q495D7 138 aa11.48□□□□□ -0.57
USP15-209ENST00000548620 SH3BP2P78314 561 aa11.47□□□□□ -0.57
USP15-209ENST00000548620 MTMR14Q8NCE2 650 aa11.47□□□□□ -0.57
USP15-209ENST00000548620 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
USP15-209ENST00000548620 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms