RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
NPAS3-204ENST00000546849 GUCA2AQ02747 115 aa12.13□□□□□ -0.47
NPAS3-204ENST00000546849 KCNC4Q03721 635 aa12.13□□□□□ -0.47
NPAS3-204ENST00000546849 PCDHB15Q9Y5E8 787 aa12.13□□□□□ -0.47
NPAS3-204ENST00000546849 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
NPAS3-204ENST00000546849 QPCTQ16769 361 aa12.12□□□□□ -0.47
NPAS3-204ENST00000546849 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
NPAS3-204ENST00000546849 HLA-CQ95604 372 aa12.12□□□□□ -0.47
NPAS3-204ENST00000546849 LILRB3O75022 631 aa12.11□□□□□ -0.47
NPAS3-204ENST00000546849 MTMR2Q13614 643 aa12.11□□□□□ -0.47
NPAS3-204ENST00000546849 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
NPAS3-204ENST00000546849 TSC1Q92574 1164 aa12.11□□□□□ -0.47
NPAS3-204ENST00000546849 AP1G2O75843 785 aa12.1□□□□□ -0.47
NPAS3-204ENST00000546849 Q3C1V9 767 aa12.1□□□□□ -0.47
NPAS3-204ENST00000546849 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
NPAS3-204ENST00000546849 HRCP23327 699 aa12.09□□□□□ -0.47
NPAS3-204ENST00000546849 MCM6Q14566 821 aa12.09□□□□□ -0.47
NPAS3-204ENST00000546849 PUS10Q3MIT2 529 aaKnown RBP12.09□□□□□ -0.47
NPAS3-204ENST00000546849 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
NPAS3-204ENST00000546849 HELBQ8NG08 1087 aaPredicted RBP12.09□□□□□ -0.47
NPAS3-204ENST00000546849 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
NPAS3-204ENST00000546849 APBB1O00213 710 aa12.08□□□□□ -0.48
NPAS3-204ENST00000546849 RAD21O60216 631 aa12.08□□□□□ -0.48
NPAS3-204ENST00000546849 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
NPAS3-204ENST00000546849 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
NPAS3-204ENST00000546849 NR1I2O75469 434 aa12.06□□□□□ -0.48
NPAS3-204ENST00000546849 APLP1P51693 650 aa12.06□□□□□ -0.48
NPAS3-204ENST00000546849 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
NPAS3-204ENST00000546849 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
NPAS3-204ENST00000546849 MORN1Q5T089 497 aa12.05□□□□□ -0.48
NPAS3-204ENST00000546849 PRM3Q9NNZ6 103 aa12.05□□□□□ -0.48
NPAS3-204ENST00000546849 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
NPAS3-204ENST00000546849 SLC27A5Q9Y2P5 690 aa12.03□□□□□ -0.48
NPAS3-204ENST00000546849 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
NPAS3-204ENST00000546849 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
NPAS3-204ENST00000546849 FBXO31Q5XUX0 539 aaPredicted RBP12□□□□□ -0.49
NPAS3-204ENST00000546849 PRR7Q8TB68 274 aa12□□□□□ -0.49
NPAS3-204ENST00000546849 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
NPAS3-204ENST00000546849 SNRKQ9NRH2 765 aa12□□□□□ -0.49
NPAS3-204ENST00000546849 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
NPAS3-204ENST00000546849 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
NPAS3-204ENST00000546849 BLOC1S3Q6QNY0 202 aa11.99□□□□□ -0.49
NPAS3-204ENST00000546849 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
NPAS3-204ENST00000546849 COPS2P61201 443 aa11.98□□□□□ -0.49
NPAS3-204ENST00000546849 MTRQ99707 1265 aa11.98□□□□□ -0.49
NPAS3-204ENST00000546849 CFAP99D6REC4 459 aa11.97□□□□□ -0.49
NPAS3-204ENST00000546849 SCUBE3Q8IX30 993 aa11.97□□□□□ -0.49
NPAS3-204ENST00000546849 RNF19BQ6ZMZ0 732 aa11.96□□□□□ -0.49
NPAS3-204ENST00000546849 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
NPAS3-204ENST00000546849 USB1Q9BQ65 265 aaKnown RBP11.95□□□□□ -0.5
NPAS3-204ENST00000546849 IL21Q9HBE4 155 aa11.95□□□□□ -0.5
NPAS3-204ENST00000546849 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
NPAS3-204ENST00000546849 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
NPAS3-204ENST00000546849 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
NPAS3-204ENST00000546849 A6NJR5 290 aa11.93□□□□□ -0.5
NPAS3-204ENST00000546849 CTDSPL2Q05D32 466 aa11.93□□□□□ -0.5
NPAS3-204ENST00000546849 BRICD5Q6PL45 260 aa11.92□□□□□ -0.5
NPAS3-204ENST00000546849 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
NPAS3-204ENST00000546849 SOCS7O14512 581 aa11.91□□□□□ -0.5
NPAS3-204ENST00000546849 NDUFB9Q9Y6M9 179 aa11.91□□□□□ -0.5
NPAS3-204ENST00000546849 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
NPAS3-204ENST00000546849 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
NPAS3-204ENST00000546849 SPSB2Q99619 263 aa11.9□□□□□ -0.5
NPAS3-204ENST00000546849 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
NPAS3-204ENST00000546849 ABL2P42684 1182 aa11.89□□□□□ -0.51
NPAS3-204ENST00000546849 DESI1Q6ICB0 168 aa11.89□□□□□ -0.51
NPAS3-204ENST00000546849 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
NPAS3-204ENST00000546849 LRRN4Q8WUT4 740 aa11.89□□□□□ -0.51
NPAS3-204ENST00000546849 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
NPAS3-204ENST00000546849 JUNDP17535 347 aa11.87□□□□□ -0.51
NPAS3-204ENST00000546849 NKX2-3Q8TAU0 364 aa11.87□□□□□ -0.51
NPAS3-204ENST00000546849 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
NPAS3-204ENST00000546849 ZPR1O75312 459 aa11.86□□□□□ -0.51
NPAS3-204ENST00000546849 TRAK2O60296 914 aa11.85□□□□□ -0.51
NPAS3-204ENST00000546849 MSS51Q4VC12 460 aa11.85□□□□□ -0.51
NPAS3-204ENST00000546849 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
NPAS3-204ENST00000546849 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
NPAS3-204ENST00000546849 TLL1O43897 1013 aa11.84□□□□□ -0.51
NPAS3-204ENST00000546849 ADH1BP00325 375 aa11.84□□□□□ -0.51
NPAS3-204ENST00000546849 PER1O15534 1290 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-204ENST00000546849 CTHP32929 405 aa11.83□□□□□ -0.52
NPAS3-204ENST00000546849 LYPD8Q6UX82 237 aa11.83□□□□□ -0.52
NPAS3-204ENST00000546849 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
NPAS3-204ENST00000546849 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
NPAS3-204ENST00000546849 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-204ENST00000546849 PTPRNQ16849 979 aa11.82□□□□□ -0.52
NPAS3-204ENST00000546849 NR6A1Q15406 480 aa11.81□□□□□ -0.52
NPAS3-204ENST00000546849 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
NPAS3-204ENST00000546849 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
NPAS3-204ENST00000546849 Q6ZNB5 142 aa11.8□□□□□ -0.52
NPAS3-204ENST00000546849 SLC6A16Q9GZN6 736 aa11.8□□□□□ -0.52
NPAS3-204ENST00000546849 CCNYL3P0C7X3 344 aa11.79□□□□□ -0.52
NPAS3-204ENST00000546849 NUDT12Q9BQG2 462 aa11.79□□□□□ -0.52
NPAS3-204ENST00000546849 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
NPAS3-204ENST00000546849 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
NPAS3-204ENST00000546849 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
NPAS3-204ENST00000546849 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
NPAS3-204ENST00000546849 GFRA3O60609 400 aa11.77□□□□□ -0.53
NPAS3-204ENST00000546849 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
NPAS3-204ENST00000546849 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms