RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 DDX54Q8TDD1 881 aaKnown RBP21.04■□□□□ 0.96
ARHGEF28-214ENST00000545377 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
ARHGEF28-214ENST00000545377 IBSPP21815 317 aaPredicted RBP21.04■□□□□ 0.96
ARHGEF28-214ENST00000545377 REC8O95072 547 aa21.03■□□□□ 0.96
ARHGEF28-214ENST00000545377 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
ARHGEF28-214ENST00000545377 ERC2O15083 957 aa21.02■□□□□ 0.96
ARHGEF28-214ENST00000545377 STK11IPQ8N1F8 1099 aa21.02■□□□□ 0.96
ARHGEF28-214ENST00000545377 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.95
ARHGEF28-214ENST00000545377 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 TXNDC2Q86VQ3 553 aa21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 DNAJC2Q99543 621 aaKnown RBP21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 HSP90AB2PQ58FF8 381 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
ARHGEF28-214ENST00000545377 TOM1L2Q6ZVM7 507 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 ROCK1Q13464 1354 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 HSP90AB4PQ58FF6 505 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 FAM161AQ3B820 660 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 OFD1O75665 1012 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 SMC3Q9UQE7 1217 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 HOMER1Q86YM7 354 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 XBP1P17861 261 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 DZIP1LQ8IYY4 767 aaKnown RBP20.97■□□□□ 0.95
ARHGEF28-214ENST00000545377 SETQ01105 290 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF28-214ENST00000545377 ATP2B1P20020 1258 aa20.97■□□□□ 0.95
ARHGEF28-214ENST00000545377 GNAI1P63096 354 aa20.96■□□□□ 0.95
ARHGEF28-214ENST00000545377 FSD1Q9BTV5 496 aa20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 SLC3A2P08195 630 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 CDK5RAP3Q96JB5 506 aa20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 IPO9Q96P70 1041 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
ARHGEF28-214ENST00000545377 SART3Q15020 963 aaKnown RBP20.94■□□□□ 0.94
ARHGEF28-214ENST00000545377 CABP4P57796 275 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 PLEKHO1Q53GL0 409 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 GPS2Q13227 327 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 TTC39AQ5SRH9 613 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 PAXIP1Q6ZW49 1069 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 KRT18P05783 430 aaKnown RBP20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 SASS6Q6UVJ0 657 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 USP47Q96K76 1375 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 ZSCAN29Q8IWY8 852 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 CCDC73Q6ZRK6 1079 aa20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 INTS3Q68E01 1043 aaKnown RBP20.9■□□□□ 0.94
ARHGEF28-214ENST00000545377 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
ARHGEF28-214ENST00000545377 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
ARHGEF28-214ENST00000545377 SMG6Q86US8 1419 aaKnown RBP20.89■□□□□ 0.93
ARHGEF28-214ENST00000545377 PDILTQ8N807 584 aa20.89■□□□□ 0.93
ARHGEF28-214ENST00000545377 MPHOSPH10O00566 681 aaKnown RBP20.89■□□□□ 0.93
ARHGEF28-214ENST00000545377 TTLL5Q6EMB2 1281 aa20.88■□□□□ 0.93
ARHGEF28-214ENST00000545377 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
ARHGEF28-214ENST00000545377 OLFM4Q6UX06 510 aa20.87■□□□□ 0.93
ARHGEF28-214ENST00000545377 RUFY1Q96T51 708 aa20.87■□□□□ 0.93
ARHGEF28-214ENST00000545377 RRP1P56182 461 aaKnown RBP20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 CCDC30Q5VVM6 783 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 NINLQ9Y2I6 1382 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 CHMP4BP1P59074 171 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 CNTROBQ8N137 903 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 ZHX3Q9H4I2 956 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 SURF6O75683 361 aaKnown RBP20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 MYL6BP14649 208 aa20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 SYCP1Q15431 976 aa20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 CCDC158Q5M9N0 1113 aa20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 XPCQ01831 940 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 SKOR2Q2VWA4 1001 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 SKIDA1Q1XH10 827 aa20.84■□□□□ 0.93
ARHGEF28-214ENST00000545377 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
ARHGEF28-214ENST00000545377 GAS2L2Q8NHY3 880 aa20.84■□□□□ 0.93
ARHGEF28-214ENST00000545377 CLASRPQ8N2M8 674 aaKnown RBP20.83■□□□□ 0.93
ARHGEF28-214ENST00000545377 PRDM2Q13029 1718 aa20.83■□□□□ 0.92
ARHGEF28-214ENST00000545377 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.92
ARHGEF28-214ENST00000545377 MYCNP04198 464 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 CCDC173Q0VFZ6 552 aa20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 SIL1Q9H173 461 aa20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 PDCL3Q9H2J4 239 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 PRDM11Q9NQV5 511 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 PDE4AP27815 886 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 RDXP35241 583 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 CAGE1Q8TC20 777 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 PSMA5P28066 241 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 THEMISQ8N1K5 641 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-214ENST00000545377 MATR3P43243 847 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■■■■□ 20.2
ARHGEF28-214ENST00000545377 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-214ENST00000545377 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-214ENST00000545377 SDF4Q9BRK5 362 aa20.79■□□□□ 0.92
ARHGEF28-214ENST00000545377 PPM1FP49593 454 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF28-214ENST00000545377 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
ARHGEF28-214ENST00000545377 PRAM1Q96QH2 718 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms