RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
GABRB3-204ENST00000541819 PDILTQ8N807 584 aa12.94□□□□□ -0.34
GABRB3-204ENST00000541819 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
GABRB3-204ENST00000541819 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-204ENST00000541819 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
GABRB3-204ENST00000541819 SOGA1O94964 1423 aa12.94□□□□□ -0.34
GABRB3-204ENST00000541819 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
GABRB3-204ENST00000541819 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
GABRB3-204ENST00000541819 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
GABRB3-204ENST00000541819 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
GABRB3-204ENST00000541819 ATF3P18847 181 aa12.93□□□□□ -0.34
GABRB3-204ENST00000541819 GSE1Q14687 1217 aa12.93□□□□□ -0.34
GABRB3-204ENST00000541819 PDE4AP27815 886 aa12.92□□□□□ -0.34
GABRB3-204ENST00000541819 NUCB2P80303 420 aa12.92□□□□□ -0.34
GABRB3-204ENST00000541819 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
GABRB3-204ENST00000541819 RIPK4P57078 832 aa12.92□□□□□ -0.34
GABRB3-204ENST00000541819 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-204ENST00000541819 DZIP1LQ8IYY4 767 aaKnown RBP12.92□□□□□ -0.34
GABRB3-204ENST00000541819 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
GABRB3-204ENST00000541819 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-204ENST00000541819 PSMA5P28066 241 aa12.92□□□□□ -0.34
GABRB3-204ENST00000541819 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
GABRB3-204ENST00000541819 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
GABRB3-204ENST00000541819 CHMP5Q9NZZ3 219 aa12.91□□□□□ -0.34
GABRB3-204ENST00000541819 KRT18P05783 430 aaKnown RBP12.9□□□□□ -0.34
GABRB3-204ENST00000541819 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
GABRB3-204ENST00000541819 TXLNAP40222 546 aa12.9□□□□□ -0.34
GABRB3-204ENST00000541819 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
GABRB3-204ENST00000541819 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
GABRB3-204ENST00000541819 PLIN1O60240 522 aa12.9□□□□□ -0.34
GABRB3-204ENST00000541819 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
GABRB3-204ENST00000541819 FILIP1LQ4L180 1135 aa12.89□□□□□ -0.35
GABRB3-204ENST00000541819 H0YHG0 523 aa12.89□□□□□ -0.35
GABRB3-204ENST00000541819 GNAI1P63096 354 aa12.89□□□□□ -0.35
GABRB3-204ENST00000541819 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
GABRB3-204ENST00000541819 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
GABRB3-204ENST00000541819 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
GABRB3-204ENST00000541819 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
GABRB3-204ENST00000541819 NEFHP12036 1026 aa12.88□□□□□ -0.35
GABRB3-204ENST00000541819 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
GABRB3-204ENST00000541819 ERLIN2O94905 339 aa12.88□□□□□ -0.35
GABRB3-204ENST00000541819 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
GABRB3-204ENST00000541819 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-204ENST00000541819 FAM13BQ9NYF5 915 aa12.88□□□□□ -0.35
GABRB3-204ENST00000541819 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 CCP110O43303 1012 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-204ENST00000541819 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 KDM4AO75164 1064 aa12.87□□□□□ -0.35
GABRB3-204ENST00000541819 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
GABRB3-204ENST00000541819 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
GABRB3-204ENST00000541819 PDCL3Q9H2J4 239 aa12.86□□□□□ -0.35
GABRB3-204ENST00000541819 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
GABRB3-204ENST00000541819 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-204ENST00000541819 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
GABRB3-204ENST00000541819 CCDC39Q9UFE4 941 aa12.86□□□□□ -0.35
GABRB3-204ENST00000541819 APAF1O14727 1248 aa12.86□□□□□ -0.35
GABRB3-204ENST00000541819 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
GABRB3-204ENST00000541819 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
GABRB3-204ENST00000541819 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
GABRB3-204ENST00000541819 SMC2O95347 1197 aa12.84□□□□□ -0.35
GABRB3-204ENST00000541819 GNL3LQ9NVN8 582 aaKnown RBP12.84□□□□□ -0.35
GABRB3-204ENST00000541819 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
GABRB3-204ENST00000541819 ANKRD62A6NC57 917 aa12.84□□□□□ -0.35
GABRB3-204ENST00000541819 CDC45O75419 566 aa12.84□□□□□ -0.35
GABRB3-204ENST00000541819 HIP1O00291 1037 aa12.83□□□□□ -0.35
GABRB3-204ENST00000541819 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
GABRB3-204ENST00000541819 ZNHIT6Q9NWK9 470 aaKnown RBP12.83□□□□□ -0.36
GABRB3-204ENST00000541819 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
GABRB3-204ENST00000541819 ZNF396Q96N95 335 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-204ENST00000541819 LUC7LQ9NQ29 371 aaKnown RBP12.83□□□□□ -0.36
GABRB3-204ENST00000541819 PPP1R1BQ9UD71 204 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-204ENST00000541819 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
GABRB3-204ENST00000541819 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
GABRB3-204ENST00000541819 TXLNBQ8N3L3 684 aa12.83□□□□□ -0.36
GABRB3-204ENST00000541819 DESP17661 470 aa12.82□□□□□ -0.36
GABRB3-204ENST00000541819 FAM43AQ8N2R8 423 aa12.82□□□□□ -0.36
GABRB3-204ENST00000541819 GOLGA6L10A6NI86 522 aa12.81□□□□□ -0.36
GABRB3-204ENST00000541819 NEBLO76041 1014 aa12.81□□□□□ -0.36
GABRB3-204ENST00000541819 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
GABRB3-204ENST00000541819 ATP2B2Q01814 1243 aa12.81□□□□□ -0.36
GABRB3-204ENST00000541819 TSPYL1Q9H0U9 437 aa12.81□□□□□ -0.36
GABRB3-204ENST00000541819 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-204ENST00000541819 AXDND1Q5T1B0 1012 aaPredicted RBP12.81□□□□□ -0.36
GABRB3-204ENST00000541819 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
GABRB3-204ENST00000541819 EZRP15311 586 aaKnown RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 CLASRPQ8N2M8 674 aaKnown RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 USP47Q96K76 1375 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 MPHOSPH10O00566 681 aaKnown RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 C22orf23Q9BZE7 217 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 HMOX1P09601 288 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 STIM1Q13586 685 aa12.8□□□□□ -0.36
GABRB3-204ENST00000541819 ENOX2Q16206 610 aaKnown RBP12.8□□□□□ -0.36
GABRB3-204ENST00000541819 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms