RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 HPS5Q9UPZ3 1129 aa8.9□□□□□ -0.98
PICALM-221ENST00000533350 FUT2Q10981 343 aa8.89□□□□□ -0.99
PICALM-221ENST00000533350 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.89□□□□□ -0.99
PICALM-221ENST00000533350 TSC1Q92574 1164 aa8.88□□□□□ -0.99
PICALM-221ENST00000533350 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
PICALM-221ENST00000533350 C6orf229H3BNL8 230 aa8.87□□□□□ -0.99
PICALM-221ENST00000533350 GJA5P36382 358 aa8.87□□□□□ -0.99
PICALM-221ENST00000533350 ATP6V1AP38606 617 aa8.87□□□□□ -0.99
PICALM-221ENST00000533350 RFC5P40937 340 aa8.87□□□□□ -0.99
PICALM-221ENST00000533350 GUCA2AQ02747 115 aa8.87□□□□□ -0.99
PICALM-221ENST00000533350 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
PICALM-221ENST00000533350 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
PICALM-221ENST00000533350 V9GY48 417 aaPredicted RBP8.86□□□□□ -0.99
PICALM-221ENST00000533350 TMEM259Q4ZIN3 620 aa8.85□□□□□ -0.99
PICALM-221ENST00000533350 HLA-CQ95604 372 aa8.85□□□□□ -0.99
PICALM-221ENST00000533350 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
PICALM-221ENST00000533350 RAD21O60216 631 aa8.84□□□□□ -0.99
PICALM-221ENST00000533350 AP1G2O75843 785 aa8.84□□□□□ -0.99
PICALM-221ENST00000533350 MTMR2Q13614 643 aa8.84□□□□□ -0.99
PICALM-221ENST00000533350 QPCTQ16769 361 aa8.84□□□□□ -0.99
PICALM-221ENST00000533350 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
PICALM-221ENST00000533350 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
PICALM-221ENST00000533350 ACTN4O43707 911 aaKnown RBP8.83□□□□□ -1
PICALM-221ENST00000533350 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
PICALM-221ENST00000533350 ZMYND15Q9H091 742 aa8.83□□□□□ -1
PICALM-221ENST00000533350 APBB1O00213 710 aa8.82□□□□□ -1
PICALM-221ENST00000533350 LILRB3O75022 631 aa8.82□□□□□ -1
PICALM-221ENST00000533350 HRCP23327 699 aa8.82□□□□□ -1
PICALM-221ENST00000533350 TJAP1Q5JTD0 557 aa8.82□□□□□ -1
PICALM-221ENST00000533350 HELBQ8NG08 1087 aaPredicted RBP8.82□□□□□ -1
PICALM-221ENST00000533350 PCDHB3Q9Y5E6 796 aa8.82□□□□□ -1
PICALM-221ENST00000533350 Q3C1V9 767 aa8.81□□□□□ -1
PICALM-221ENST00000533350 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
PICALM-221ENST00000533350 PPP1R18Q6NYC8 613 aa8.81□□□□□ -1
PICALM-221ENST00000533350 BANK1Q8NDB2 785 aa8.81□□□□□ -1
PICALM-221ENST00000533350 PRM3Q9NNZ6 103 aa8.81□□□□□ -1
PICALM-221ENST00000533350 PDZRN3Q9UPQ7 1066 aa8.81□□□□□ -1
PICALM-221ENST00000533350 SPDYE5A6NIY4 337 aa8.8□□□□□ -1
PICALM-221ENST00000533350 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
PICALM-221ENST00000533350 MCM6Q14566 821 aa8.8□□□□□ -1
PICALM-221ENST00000533350 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
PICALM-221ENST00000533350 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
PICALM-221ENST00000533350 NR1I2O75469 434 aa8.79□□□□□ -1
PICALM-221ENST00000533350 APLP1P51693 650 aa8.78□□□□□ -1
PICALM-221ENST00000533350 MORN1Q5T089 497 aa8.78□□□□□ -1
PICALM-221ENST00000533350 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
PICALM-221ENST00000533350 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
PICALM-221ENST00000533350 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
PICALM-221ENST00000533350 USP17L8P0C7I0 530 aa8.76□□□□□ -1.01
PICALM-221ENST00000533350 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.76□□□□□ -1.01
PICALM-221ENST00000533350 SNRKQ9NRH2 765 aa8.76□□□□□ -1.01
PICALM-221ENST00000533350 FMNL1O95466 1100 aaPredicted RBP8.75□□□□□ -1.01
PICALM-221ENST00000533350 COPS2P61201 443 aa8.75□□□□□ -1.01
PICALM-221ENST00000533350 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
PICALM-221ENST00000533350 RETREG3Q86VR2 466 aa8.75□□□□□ -1.01
PICALM-221ENST00000533350 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
PICALM-221ENST00000533350 CLUAP1Q96AJ1 413 aa8.75□□□□□ -1.01
PICALM-221ENST00000533350 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
PICALM-221ENST00000533350 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
PICALM-221ENST00000533350 SCUBE3Q8IX30 993 aa8.73□□□□□ -1.01
PICALM-221ENST00000533350 MTRQ99707 1265 aa8.73□□□□□ -1.01
PICALM-221ENST00000533350 CFAP99D6REC4 459 aa8.72□□□□□ -1.01
PICALM-221ENST00000533350 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
PICALM-221ENST00000533350 RNF19BQ6ZMZ0 732 aa8.72□□□□□ -1.01
PICALM-221ENST00000533350 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
PICALM-221ENST00000533350 A6NJR5 290 aa8.7□□□□□ -1.02
PICALM-221ENST00000533350 ABL2P42684 1182 aa8.7□□□□□ -1.02
PICALM-221ENST00000533350 PROSER2Q86WR7 435 aaPredicted RBP8.7□□□□□ -1.02
PICALM-221ENST00000533350 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
PICALM-221ENST00000533350 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
PICALM-221ENST00000533350 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
PICALM-221ENST00000533350 SPSB2Q99619 263 aa8.69□□□□□ -1.02
PICALM-221ENST00000533350 GDPD2Q9HCC8 539 aa8.69□□□□□ -1.02
PICALM-221ENST00000533350 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
PICALM-221ENST00000533350 PNMA1Q8ND90 353 aa8.68□□□□□ -1.02
PICALM-221ENST00000533350 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
PICALM-221ENST00000533350 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
PICALM-221ENST00000533350 SALL2Q9Y467 1007 aaPredicted RBP8.68□□□□□ -1.02
PICALM-221ENST00000533350 NDUFB9Q9Y6M9 179 aa8.68□□□□□ -1.02
PICALM-221ENST00000533350 POTECB2RU33 542 aa8.67□□□□□ -1.02
PICALM-221ENST00000533350 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
PICALM-221ENST00000533350 TRAK2O60296 914 aa8.65□□□□□ -1.02
PICALM-221ENST00000533350 JUNDP17535 347 aa8.65□□□□□ -1.02
PICALM-221ENST00000533350 MYT1Q01538 1121 aa8.65□□□□□ -1.02
PICALM-221ENST00000533350 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
PICALM-221ENST00000533350 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
PICALM-221ENST00000533350 NKX2-3Q8TAU0 364 aa8.65□□□□□ -1.02
PICALM-221ENST00000533350 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
PICALM-221ENST00000533350 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
PICALM-221ENST00000533350 SOCS7O14512 581 aa8.64□□□□□ -1.03
PICALM-221ENST00000533350 ZPR1O75312 459 aa8.64□□□□□ -1.03
PICALM-221ENST00000533350 CTHP32929 405 aa8.64□□□□□ -1.03
PICALM-221ENST00000533350 GGCXP38435 758 aa8.64□□□□□ -1.03
PICALM-221ENST00000533350 ARID3AQ99856 593 aa8.64□□□□□ -1.03
PICALM-221ENST00000533350 HMX1Q9NP08 348 aaPredicted RBP8.64□□□□□ -1.03
PICALM-221ENST00000533350 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
PICALM-221ENST00000533350 TLL1O43897 1013 aa8.63□□□□□ -1.03
PICALM-221ENST00000533350 DGAT1O75907 488 aa8.63□□□□□ -1.03
PICALM-221ENST00000533350 ADH1BP00325 375 aa8.63□□□□□ -1.03
PICALM-221ENST00000533350 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms