RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
ATM-211ENST00000527389 ADH1BP00325 375 aa12.27□□□□□ -0.45
ATM-211ENST00000527389 LIMD1Q9UGP4 676 aa12.27□□□□□ -0.45
ATM-211ENST00000527389 RNF19BQ6ZMZ0 732 aa12.26□□□□□ -0.45
ATM-211ENST00000527389 PRPF38BQ5VTL8 546 aaKnown RBP12.24□□□□□ -0.45
ATM-211ENST00000527389 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
ATM-211ENST00000527389 SPSB2Q99619 263 aa12.24□□□□□ -0.45
ATM-211ENST00000527389 PCDHB15Q9Y5E8 787 aa12.23□□□□□ -0.45
ATM-211ENST00000527389 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
ATM-211ENST00000527389 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
ATM-211ENST00000527389 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
ATM-211ENST00000527389 RETREG3Q86VR2 466 aa12.21□□□□□ -0.45
ATM-211ENST00000527389 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
ATM-211ENST00000527389 LILRB3O75022 631 aa12.2□□□□□ -0.46
ATM-211ENST00000527389 MTMR2Q13614 643 aa12.2□□□□□ -0.46
ATM-211ENST00000527389 USB1Q9BQ65 265 aaKnown RBP12.2□□□□□ -0.46
ATM-211ENST00000527389 A0A0G2JS52 829 aa12.19□□□□□ -0.46
ATM-211ENST00000527389 FAM160A2Q8N612 972 aaPredicted RBP12.19□□□□□ -0.46
ATM-211ENST00000527389 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
ATM-211ENST00000527389 ZBTB3Q9H5J0 574 aa12.19□□□□□ -0.46
ATM-211ENST00000527389 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
ATM-211ENST00000527389 HRCP23327 699 aa12.18□□□□□ -0.46
ATM-211ENST00000527389 SLC6A16Q9GZN6 736 aa12.18□□□□□ -0.46
ATM-211ENST00000527389 QPCTQ16769 361 aa12.17□□□□□ -0.46
ATM-211ENST00000527389 PROCA1Q8NCQ7 364 aaPredicted RBP12.17□□□□□ -0.46
ATM-211ENST00000527389 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
ATM-211ENST00000527389 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
ATM-211ENST00000527389 S1PR4O95977 384 aa12.15□□□□□ -0.46
ATM-211ENST00000527389 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
ATM-211ENST00000527389 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
ATM-211ENST00000527389 GGCXP38435 758 aa12.14□□□□□ -0.47
ATM-211ENST00000527389 MMP16P51512 607 aa12.14□□□□□ -0.47
ATM-211ENST00000527389 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
ATM-211ENST00000527389 PPP1R18Q6NYC8 613 aa12.14□□□□□ -0.47
ATM-211ENST00000527389 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
ATM-211ENST00000527389 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
ATM-211ENST00000527389 DXOO77932 396 aaKnown RBP12.12□□□□□ -0.47
ATM-211ENST00000527389 DESI1Q6ICB0 168 aa12.12□□□□□ -0.47
ATM-211ENST00000527389 PRR7Q8TB68 274 aa12.12□□□□□ -0.47
ATM-211ENST00000527389 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
ATM-211ENST00000527389 JUNDP17535 347 aa12.11□□□□□ -0.47
ATM-211ENST00000527389 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
ATM-211ENST00000527389 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
ATM-211ENST00000527389 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
ATM-211ENST00000527389 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
ATM-211ENST00000527389 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
ATM-211ENST00000527389 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
ATM-211ENST00000527389 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
ATM-211ENST00000527389 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
ATM-211ENST00000527389 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
ATM-211ENST00000527389 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
ATM-211ENST00000527389 RFC5P40937 340 aa12.05□□□□□ -0.48
ATM-211ENST00000527389 PTPRNQ16849 979 aa12.04□□□□□ -0.48
ATM-211ENST00000527389 FCF1Q9Y324 198 aaKnown RBP12.04□□□□□ -0.48
ATM-211ENST00000527389 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
ATM-211ENST00000527389 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
ATM-211ENST00000527389 RGS20O76081 388 aa12.02□□□□□ -0.49
ATM-211ENST00000527389 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
ATM-211ENST00000527389 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
ATM-211ENST00000527389 CCNYL3P0C7X3 344 aa11.99□□□□□ -0.49
ATM-211ENST00000527389 TMEM259Q4ZIN3 620 aa11.99□□□□□ -0.49
ATM-211ENST00000527389 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
ATM-211ENST00000527389 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
ATM-211ENST00000527389 TSC1Q92574 1164 aa11.97□□□□□ -0.49
ATM-211ENST00000527389 EMID1Q96A84 441 aaPredicted RBP11.97□□□□□ -0.49
ATM-211ENST00000527389 EVA1BQ9NVM1 165 aa11.97□□□□□ -0.49
ATM-211ENST00000527389 F12P00748 615 aaPredicted RBP11.96□□□□□ -0.49
ATM-211ENST00000527389 AP1G2O75843 785 aa11.95□□□□□ -0.5
ATM-211ENST00000527389 V9GY48 417 aaPredicted RBP11.95□□□□□ -0.5
ATM-211ENST00000527389 RPIAP49247 311 aa11.94□□□□□ -0.5
ATM-211ENST00000527389 BANK1Q8NDB2 785 aa11.94□□□□□ -0.5
ATM-211ENST00000527389 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
ATM-211ENST00000527389 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
ATM-211ENST00000527389 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
ATM-211ENST00000527389 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
ATM-211ENST00000527389 PRKD2Q9BZL6 878 aa11.92□□□□□ -0.5
ATM-211ENST00000527389 SOCS7O14512 581 aa11.91□□□□□ -0.5
ATM-211ENST00000527389 SLC19A1P41440 591 aa11.91□□□□□ -0.5
ATM-211ENST00000527389 LRRN4Q8WUT4 740 aa11.91□□□□□ -0.5
ATM-211ENST00000527389 PTCRAQ6ISU1 281 aaPredicted RBP11.9□□□□□ -0.5
ATM-211ENST00000527389 ZBTB24O43167 697 aaPredicted RBP11.89□□□□□ -0.51
ATM-211ENST00000527389 MAP10Q9P2G4 905 aa11.89□□□□□ -0.51
ATM-211ENST00000527389 CTHP32929 405 aa11.88□□□□□ -0.51
ATM-211ENST00000527389 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
ATM-211ENST00000527389 UNC93B1Q9H1C4 597 aa11.88□□□□□ -0.51
ATM-211ENST00000527389 TRIM32Q13049 653 aa11.87□□□□□ -0.51
ATM-211ENST00000527389 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
ATM-211ENST00000527389 CD2BP2O95400 341 aaKnown RBP11.84□□□□□ -0.51
ATM-211ENST00000527389 ZNF598Q86UK7 904 aaKnown RBP11.84□□□□□ -0.51
ATM-211ENST00000527389 NR6A1Q15406 480 aa11.83□□□□□ -0.52
ATM-211ENST00000527389 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
ATM-211ENST00000527389 GJD4Q96KN9 370 aaPredicted RBP11.83□□□□□ -0.52
ATM-211ENST00000527389 ARMC2Q8NEN0 867 aa11.82□□□□□ -0.52
ATM-211ENST00000527389 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
ATM-211ENST00000527389 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
ATM-211ENST00000527389 WNT7BP56706 349 aa11.81□□□□□ -0.52
ATM-211ENST00000527389 ZNF697Q5TEC3 545 aa11.81□□□□□ -0.52
ATM-211ENST00000527389 MCM6Q14566 821 aa11.8□□□□□ -0.52
ATM-211ENST00000527389 EPS8L1Q8TE68 723 aa11.8□□□□□ -0.52
ATM-211ENST00000527389 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms