RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
CKAP5-203ENST00000525248 NRXN3Q9Y4C0 1643 aa13.89□□□□□ -0.19
CKAP5-203ENST00000525248 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
CKAP5-203ENST00000525248 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
CKAP5-203ENST00000525248 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
CKAP5-203ENST00000525248 SETBP1Q9Y6X0 1596 aa13.88□□□□□ -0.19
CKAP5-203ENST00000525248 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
CKAP5-203ENST00000525248 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
CKAP5-203ENST00000525248 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
CKAP5-203ENST00000525248 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
CKAP5-203ENST00000525248 PTPRUQ92729 1446 aa13.86□□□□□ -0.19
CKAP5-203ENST00000525248 PIK3R4Q99570 1358 aa13.85□□□□□ -0.19
CKAP5-203ENST00000525248 XRN1Q8IZH2 1706 aaKnown RBP13.85□□□□□ -0.19
CKAP5-203ENST00000525248 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
CKAP5-203ENST00000525248 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
CKAP5-203ENST00000525248 RASEFQ8IZ41 740 aa13.83□□□□□ -0.2
CKAP5-203ENST00000525248 SLAIN2Q9P270 581 aa13.83□□□□□ -0.2
CKAP5-203ENST00000525248 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
CKAP5-203ENST00000525248 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
CKAP5-203ENST00000525248 AMOTL2Q9Y2J4 779 aa13.82□□□□□ -0.2
CKAP5-203ENST00000525248 METP08581 1390 aa13.82□□□□□ -0.2
CKAP5-203ENST00000525248 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
CKAP5-203ENST00000525248 KIF1BO60333 1816 aa13.81□□□□□ -0.2
CKAP5-203ENST00000525248 NUBP1P53384 320 aa13.81□□□□□ -0.2
CKAP5-203ENST00000525248 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
CKAP5-203ENST00000525248 ATF3P18847 181 aa13.79□□□□□ -0.2
CKAP5-203ENST00000525248 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
CKAP5-203ENST00000525248 DCCP43146 1447 aa13.77□□□□□ -0.21
CKAP5-203ENST00000525248 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
CKAP5-203ENST00000525248 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
CKAP5-203ENST00000525248 C19orf44Q9H6X5 657 aa13.77□□□□□ -0.21
CKAP5-203ENST00000525248 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
CKAP5-203ENST00000525248 ADGRL3Q9HAR2 1447 aa13.76□□□□□ -0.21
CKAP5-203ENST00000525248 JCADQ9P266 1359 aa13.76□□□□□ -0.21
CKAP5-203ENST00000525248 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
CKAP5-203ENST00000525248 SETD1AO15047 1707 aaKnown RBP13.76□□□□□ -0.21
CKAP5-203ENST00000525248 MST1RQ04912 1400 aa13.74□□□□□ -0.21
CKAP5-203ENST00000525248 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
CKAP5-203ENST00000525248 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
CKAP5-203ENST00000525248 LRP6O75581 1613 aa13.74□□□□□ -0.21
CKAP5-203ENST00000525248 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
CKAP5-203ENST00000525248 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
CKAP5-203ENST00000525248 PPLO60437 1756 aa13.73□□□□□ -0.21
CKAP5-203ENST00000525248 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
CKAP5-203ENST00000525248 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
CKAP5-203ENST00000525248 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
CKAP5-203ENST00000525248 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
CKAP5-203ENST00000525248 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
CKAP5-203ENST00000525248 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
CKAP5-203ENST00000525248 SHPRHQ149N8 1683 aa13.71□□□□□ -0.21
CKAP5-203ENST00000525248 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
CKAP5-203ENST00000525248 RPGRIP1LQ68CZ1 1315 aa13.69□□□□□ -0.22
CKAP5-203ENST00000525248 NHSL1Q5SYE7 1610 aa13.69□□□□□ -0.22
CKAP5-203ENST00000525248 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
CKAP5-203ENST00000525248 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
CKAP5-203ENST00000525248 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
CKAP5-203ENST00000525248 GABBR2O75899 941 aa13.68□□□□□ -0.22
CKAP5-203ENST00000525248 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
CKAP5-203ENST00000525248 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
CKAP5-203ENST00000525248 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
CKAP5-203ENST00000525248 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
CKAP5-203ENST00000525248 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
CKAP5-203ENST00000525248 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
CKAP5-203ENST00000525248 ADGRF5Q8IZF2 1346 aa13.66□□□□□ -0.22
CKAP5-203ENST00000525248 SETD5Q9C0A6 1442 aa13.66□□□□□ -0.22
CKAP5-203ENST00000525248 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
CKAP5-203ENST00000525248 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
CKAP5-203ENST00000525248 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
CKAP5-203ENST00000525248 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
CKAP5-203ENST00000525248 CDC42BPGQ6DT37 1551 aa13.64□□□□□ -0.23
CKAP5-203ENST00000525248 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
CKAP5-203ENST00000525248 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
CKAP5-203ENST00000525248 ANKRD30BQ9BXX2 1392 aa13.63□□□□□ -0.23
CKAP5-203ENST00000525248 STK26Q9P289 416 aa13.63□□□□□ -0.23
CKAP5-203ENST00000525248 CIZ1Q9ULV3 898 aaPredicted RBP13.63□□□□□ -0.23
CKAP5-203ENST00000525248 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
CKAP5-203ENST00000525248 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
CKAP5-203ENST00000525248 TECPR2O15040 1411 aa13.6□□□□□ -0.23
CKAP5-203ENST00000525248 GSE1Q14687 1217 aa13.6□□□□□ -0.23
CKAP5-203ENST00000525248 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
CKAP5-203ENST00000525248 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
CKAP5-203ENST00000525248 LAMC1P11047 1609 aa13.6□□□□□ -0.23
CKAP5-203ENST00000525248 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
CKAP5-203ENST00000525248 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
CKAP5-203ENST00000525248 MYOM2P54296 1465 aa13.59□□□□□ -0.23
CKAP5-203ENST00000525248 LRRC59Q96AG4 307 aaKnown RBP13.58□□□□□ -0.24
CKAP5-203ENST00000525248 YTHDC2Q9H6S0 1430 aaKnown RBP13.57□□□□□ -0.24
CKAP5-203ENST00000525248 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
CKAP5-203ENST00000525248 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
CKAP5-203ENST00000525248 WAPLQ7Z5K2 1190 aa13.57□□□□□ -0.24
CKAP5-203ENST00000525248 AFF2P51816 1311 aa13.57□□□□□ -0.24
CKAP5-203ENST00000525248 NRXN1Q9ULB1 1477 aa13.56□□□□□ -0.24
CKAP5-203ENST00000525248 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
CKAP5-203ENST00000525248 PYGBP11216 843 aa13.56□□□□□ -0.24
CKAP5-203ENST00000525248 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
CKAP5-203ENST00000525248 C8orf37Q96NL8 207 aa13.56□□□□□ -0.24
CKAP5-203ENST00000525248 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
CKAP5-203ENST00000525248 CLCN6P51797 869 aa13.55□□□□□ -0.24
CKAP5-203ENST00000525248 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
CKAP5-203ENST00000525248 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms