RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 PES1O00541 588 aaKnown RBP19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 TSR1Q2NL82 804 aaKnown RBP19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 UBTFL1P0CB47 393 aaPredicted RBP19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 MTHFSP49914 203 aa19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 PRM3Q9NNZ6 103 aa19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 CCDC7Q96M83 1385 aa19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 TPM2P07951 284 aa19.82■□□□□ 0.76
PCDHA3-201ENST00000522353 KIF7Q2M1P5 1343 aa19.81■□□□□ 0.76
PCDHA3-201ENST00000522353 AAMPQ13685 434 aa19.81■□□□□ 0.76
PCDHA3-201ENST00000522353 NEUROD6Q96NK8 337 aa19.81■□□□□ 0.76
PCDHA3-201ENST00000522353 ANO2Q9NQ90 1003 aa19.81■□□□□ 0.76
PCDHA3-201ENST00000522353 NESP48681 1621 aa19.8■□□□□ 0.76
PCDHA3-201ENST00000522353 CCDC30Q5VVM6 783 aa19.8■□□□□ 0.76
PCDHA3-201ENST00000522353 FOXD4L5Q5VV16 416 aaPredicted RBP19.8■□□□□ 0.76
PCDHA3-201ENST00000522353 EXOC6Q8TAG9 804 aa19.8■□□□□ 0.76
PCDHA3-201ENST00000522353 FOXD4L4Q8WXT5 416 aaPredicted RBP19.8■□□□□ 0.76
PCDHA3-201ENST00000522353 KIF21BO75037 1637 aa19.79■□□□□ 0.76
PCDHA3-201ENST00000522353 KIF6Q6ZMV9 814 aa19.79■□□□□ 0.76
PCDHA3-201ENST00000522353 NFXL1Q6ZNB6 911 aa19.79■□□□□ 0.76
PCDHA3-201ENST00000522353 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
PCDHA3-201ENST00000522353 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
PCDHA3-201ENST00000522353 RAPGEF3O95398 923 aa19.78■□□□□ 0.76
PCDHA3-201ENST00000522353 C9orf84Q5VXU9 1444 aa19.78■□□□□ 0.76
PCDHA3-201ENST00000522353 PDE4AP27815 886 aa19.78■□□□□ 0.76
PCDHA3-201ENST00000522353 GNAI3P08754 354 aa19.77■□□□□ 0.76
PCDHA3-201ENST00000522353 RALYLQ86SE5 291 aaKnown RBP19.77■□□□□ 0.76
PCDHA3-201ENST00000522353 AMER1Q5JTC6 1135 aaPredicted RBP19.77■□□□□ 0.76
PCDHA3-201ENST00000522353 TPM1P09493 284 aa19.77■□□□□ 0.75
PCDHA3-201ENST00000522353 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.75
PCDHA3-201ENST00000522353 TOM1L2Q6ZVM7 507 aa19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 BECN2A8MW95 431 aa19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 CCDC43Q96MW1 224 aaKnown RBP19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
PCDHA3-201ENST00000522353 GOLGA6L19H0YKK7 550 aa19.75■□□□□ 0.75
PCDHA3-201ENST00000522353 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
PCDHA3-201ENST00000522353 EFCAB5A4FU69 1503 aa19.75■□□□□ 0.75
PCDHA3-201ENST00000522353 INTS3Q68E01 1043 aaKnown RBP19.75■□□□□ 0.75
PCDHA3-201ENST00000522353 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
PCDHA3-201ENST00000522353 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
PCDHA3-201ENST00000522353 ANO8Q9HCE9 1232 aaPredicted RBP19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 PRDM11Q9NQV5 511 aa19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 NUTM2BA6NNL0 878 aaPredicted RBP19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 NUTM2EB1AL46 878 aaPredicted RBP19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 SAFBQ15424 915 aaKnown RBP eCLIP19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 NUTM2AQ8IVF1 878 aaPredicted RBP19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 PRKAR2BP31323 418 aa19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 PDE4CQ08493 712 aa19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 TBC1D2BQ9UPU7 963 aa19.74■□□□□ 0.75
PCDHA3-201ENST00000522353 CLASRPQ8N2M8 674 aaKnown RBP19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 CDK19Q9BWU1 502 aa19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 PNISRQ8TF01 805 aaKnown RBP19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 SLC26A8Q96RN1 970 aa19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 HOOK1Q9UJC3 728 aaKnown RBP19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 SPG7Q9UQ90 795 aa19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
PCDHA3-201ENST00000522353 A0A0U1RQG5 324 aaPredicted RBP19.72■□□□□ 0.75
PCDHA3-201ENST00000522353 TCP11L2Q8N4U5 519 aa19.72■□□□□ 0.75
PCDHA3-201ENST00000522353 DDX49Q9Y6V7 483 aaKnown RBP19.72■□□□□ 0.75
PCDHA3-201ENST00000522353 ANKRD20A12PQ8NF67 263 aa19.72■□□□□ 0.75
PCDHA3-201ENST00000522353 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
PCDHA3-201ENST00000522353 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
PCDHA3-201ENST00000522353 CABP4P57796 275 aa19.7■□□□□ 0.74
PCDHA3-201ENST00000522353 RTEL1-TNFRSF6BF6WH68 1400 aa19.7■□□□□ 0.74
PCDHA3-201ENST00000522353 CABP1Q9NZU7 370 aa19.7■□□□□ 0.74
PCDHA3-201ENST00000522353 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
PCDHA3-201ENST00000522353 GOLGA6L1Q8N7Z2 621 aa19.7■□□□□ 0.74
PCDHA3-201ENST00000522353 FAM177BA6PVY3 158 aa19.69■□□□□ 0.74
PCDHA3-201ENST00000522353 ANKRD30BQ9BXX2 1392 aa19.69■□□□□ 0.74
PCDHA3-201ENST00000522353 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
PCDHA3-201ENST00000522353 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
PCDHA3-201ENST00000522353 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
PCDHA3-201ENST00000522353 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
PCDHA3-201ENST00000522353 LNPKQ9C0E8 428 aa19.68■□□□□ 0.74
PCDHA3-201ENST00000522353 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 NINLQ9Y2I6 1382 aa19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 FYB1O15117 783 aa19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 IPO7O95373 1038 aaKnown RBP19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 FOXD4L6Q3SYB3 417 aaPredicted RBP19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 FOXD4L3Q6VB84 417 aaPredicted RBP19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 SLC12A5Q9H2X9 1139 aa19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 GNL3LQ9NVN8 582 aaKnown RBP19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
PCDHA3-201ENST00000522353 SURF6O75683 361 aaKnown RBP19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 SART3Q15020 963 aaKnown RBP19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 SULT6B1Q6IMI4 303 aa19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 XBP1P17861 261 aa19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 SMC3Q9UQE7 1217 aa19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 HDGFL1Q5TGJ6 251 aa19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
PCDHA3-201ENST00000522353 ATAD2Q6PL18 1390 aa19.65■□□□□ 0.74
PCDHA3-201ENST00000522353 PPP2R1AP30153 589 aa19.65■□□□□ 0.74
PCDHA3-201ENST00000522353 ERC1Q8IUD2 1116 aa19.65■□□□□ 0.74
PCDHA3-201ENST00000522353 CNTROBQ8N137 903 aa19.65■□□□□ 0.74
PCDHA3-201ENST00000522353 FSD1Q9BTV5 496 aa19.65■□□□□ 0.74
PCDHA3-201ENST00000522353 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms