RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 C19orf44Q9H6X5 657 aa8.99□□□□□ -0.97
IGHV4-55-201ENST00000520889 TRAK1Q9UPV9 953 aa8.99□□□□□ -0.97
IGHV4-55-201ENST00000520889 CENPJQ9HC77 1338 aaPredicted RBP8.99□□□□□ -0.97
IGHV4-55-201ENST00000520889 USP47Q96K76 1375 aa8.99□□□□□ -0.97
IGHV4-55-201ENST00000520889 FMN2Q9NZ56 1722 aa8.98□□□□□ -0.97
IGHV4-55-201ENST00000520889 PRAM1Q96QH2 718 aa8.98□□□□□ -0.97
IGHV4-55-201ENST00000520889 POGKQ9P215 609 aa8.98□□□□□ -0.97
IGHV4-55-201ENST00000520889 STK26Q9P289 416 aa8.98□□□□□ -0.97
IGHV4-55-201ENST00000520889 MSH6P52701 1360 aa8.98□□□□□ -0.97
IGHV4-55-201ENST00000520889 EIF4G2P78344 907 aaKnown RBP eCLIP8.97□□□□□ -0.97
IGHV4-55-201ENST00000520889 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
IGHV4-55-201ENST00000520889 PLEKHH1Q9ULM0 1364 aa8.97□□□□□ -0.97
IGHV4-55-201ENST00000520889 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
IGHV4-55-201ENST00000520889 WAPLQ7Z5K2 1190 aa8.96□□□□□ -0.98
IGHV4-55-201ENST00000520889 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
IGHV4-55-201ENST00000520889 ANKARQ7Z5J8 1434 aa8.96□□□□□ -0.98
IGHV4-55-201ENST00000520889 TESK2Q96S53 571 aa8.95□□□□□ -0.98
IGHV4-55-201ENST00000520889 TULP4Q9NRJ4 1543 aa8.95□□□□□ -0.98
IGHV4-55-201ENST00000520889 ST20-MTHFSA0A0A6YYL1 179 aa8.94□□□□□ -0.98
IGHV4-55-201ENST00000520889 WASLO00401 505 aaPredicted RBP8.94□□□□□ -0.98
IGHV4-55-201ENST00000520889 CDCA8Q53HL2 280 aa8.94□□□□□ -0.98
IGHV4-55-201ENST00000520889 EVC2Q86UK5 1308 aa8.94□□□□□ -0.98
IGHV4-55-201ENST00000520889 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
IGHV4-55-201ENST00000520889 TOPAZ1Q8N9V7 1692 aa8.94□□□□□ -0.98
IGHV4-55-201ENST00000520889 TOM1O60784 492 aa8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 ATF3P18847 181 aa8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 TMF1P82094 1093 aa8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 C14orf37Q86TY3 774 aa8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 MST1RQ04912 1400 aa8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 USP32Q8NFA0 1604 aa8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 RGPD8O14715 1765 aaPredicted RBP8.93□□□□□ -0.98
IGHV4-55-201ENST00000520889 ATAD2Q6PL18 1390 aa8.92□□□□□ -0.98
IGHV4-55-201ENST00000520889 NINLQ9Y2I6 1382 aa8.92□□□□□ -0.98
IGHV4-55-201ENST00000520889 HSPA5P11021 654 aaKnown RBP8.92□□□□□ -0.98
IGHV4-55-201ENST00000520889 ATP7BP35670 1465 aa8.91□□□□□ -0.98
IGHV4-55-201ENST00000520889 C1orf167Q5SNV9 1468 aa8.91□□□□□ -0.98
IGHV4-55-201ENST00000520889 MINK1Q8N4C8 1332 aaPredicted RBP8.91□□□□□ -0.98
IGHV4-55-201ENST00000520889 CDK19Q9BWU1 502 aa8.9□□□□□ -0.98
IGHV4-55-201ENST00000520889 SLAIN2Q9P270 581 aa8.9□□□□□ -0.98
IGHV4-55-201ENST00000520889 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
IGHV4-55-201ENST00000520889 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
IGHV4-55-201ENST00000520889 SAFB2Q14151 953 aaKnown RBP eCLIP8.89□□□□□ -0.99
IGHV4-55-201ENST00000520889 NHSL1Q5SYE7 1610 aa8.89□□□□□ -0.99
IGHV4-55-201ENST00000520889 AKAP12Q02952 1782 aa8.89□□□□□ -0.99
IGHV4-55-201ENST00000520889 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
IGHV4-55-201ENST00000520889 AHDC1Q5TGY3 1603 aaPredicted RBP8.88□□□□□ -0.99
IGHV4-55-201ENST00000520889 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
IGHV4-55-201ENST00000520889 NUDT16Q96DE0 195 aaKnown RBP8.88□□□□□ -0.99
IGHV4-55-201ENST00000520889 RBM33Q96EV2 1170 aaKnown RBP8.88□□□□□ -0.99
IGHV4-55-201ENST00000520889 POLR3AO14802 1390 aaPredicted RBP8.87□□□□□ -0.99
IGHV4-55-201ENST00000520889 DISP3Q9P2K9 1392 aa8.87□□□□□ -0.99
IGHV4-55-201ENST00000520889 PRR36Q9H6K5 1346 aa8.87□□□□□ -0.99
IGHV4-55-201ENST00000520889 SRPK2P78362 688 aaKnown RBP8.87□□□□□ -0.99
IGHV4-55-201ENST00000520889 HIRIP3Q9BW71 556 aaPredicted RBP8.87□□□□□ -0.99
IGHV4-55-201ENST00000520889 MYOM1P52179 1685 aa8.87□□□□□ -0.99
IGHV4-55-201ENST00000520889 MON2Q7Z3U7 1717 aa8.86□□□□□ -0.99
IGHV4-55-201ENST00000520889 UBAP1LF5GYI3 381 aa8.86□□□□□ -0.99
IGHV4-55-201ENST00000520889 ZNF692Q9BU19 519 aaPredicted RBP8.86□□□□□ -0.99
IGHV4-55-201ENST00000520889 CABP2Q9NPB3 220 aa8.86□□□□□ -0.99
IGHV4-55-201ENST00000520889 PHF8Q9UPP1 1060 aa8.86□□□□□ -0.99
IGHV4-55-201ENST00000520889 PPIP5K1Q6PFW1 1433 aa8.86□□□□□ -0.99
IGHV4-55-201ENST00000520889 NPHP3Q7Z494 1330 aa8.85□□□□□ -0.99
IGHV4-55-201ENST00000520889 BRINP3Q76B58 766 aa8.85□□□□□ -0.99
IGHV4-55-201ENST00000520889 CPSF1Q10570 1443 aaKnown RBP8.85□□□□□ -0.99
IGHV4-55-201ENST00000520889 MSH5O43196 834 aa8.84□□□□□ -0.99
IGHV4-55-201ENST00000520889 ESCO1Q5FWF5 840 aa8.84□□□□□ -0.99
IGHV4-55-201ENST00000520889 FBXO41Q8TF61 875 aa8.84□□□□□ -0.99
IGHV4-55-201ENST00000520889 TRPM3Q9HCF6 1732 aaPredicted RBP8.84□□□□□ -0.99
IGHV4-55-201ENST00000520889 ANKRD36BQ8N2N9 1353 aa8.84□□□□□ -0.99
IGHV4-55-201ENST00000520889 CCDC7Q96M83 1385 aa8.84□□□□□ -0.99
IGHV4-55-201ENST00000520889 SOS2Q07890 1332 aaPredicted RBP8.83□□□□□ -1
IGHV4-55-201ENST00000520889 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 PHLPP1O60346 1717 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 NRKQ7Z2Y5 1582 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 ORAI2Q96SN7 254 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 TERF2IPQ9NYB0 399 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 USP54Q70EL1 1684 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 SBNO1A3KN83 1393 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 PXDNQ92626 1479 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 CD163L1Q9NR16 1453 aa8.83□□□□□ -1
IGHV4-55-201ENST00000520889 ACEP12821 1306 aa8.82□□□□□ -1
IGHV4-55-201ENST00000520889 SSH2Q76I76 1423 aa8.82□□□□□ -1
IGHV4-55-201ENST00000520889 PSME1Q06323 249 aa8.82□□□□□ -1
IGHV4-55-201ENST00000520889 CABP1Q9NZU7 370 aa8.82□□□□□ -1
IGHV4-55-201ENST00000520889 COL16A1Q07092 1604 aaPredicted RBP8.82□□□□□ -1
IGHV4-55-201ENST00000520889 ALS2Q96Q42 1657 aa8.81□□□□□ -1
IGHV4-55-201ENST00000520889 WASHC2AQ641Q2 1341 aa8.81□□□□□ -1
IGHV4-55-201ENST00000520889 USP6P35125 1406 aa8.81□□□□□ -1
IGHV4-55-201ENST00000520889 COL22A1Q8NFW1 1626 aaPredicted RBP8.81□□□□□ -1
IGHV4-55-201ENST00000520889 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
IGHV4-55-201ENST00000520889 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
IGHV4-55-201ENST00000520889 NGDNQ8NEJ9 315 aaKnown RBP8.81□□□□□ -1
IGHV4-55-201ENST00000520889 SHPRHQ149N8 1683 aa8.81□□□□□ -1
IGHV4-55-201ENST00000520889 TTC21AQ8NDW8 1320 aa8.8□□□□□ -1
IGHV4-55-201ENST00000520889 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
IGHV4-55-201ENST00000520889 NUTM2FA1L443 756 aa8.8□□□□□ -1
IGHV4-55-201ENST00000520889 LRRC59Q96AG4 307 aaKnown RBP8.8□□□□□ -1
IGHV4-55-201ENST00000520889 SLC12A5Q9H2X9 1139 aa8.8□□□□□ -1
IGHV4-55-201ENST00000520889 A0A1W2PP64 1363 aa8.79□□□□□ -1
IGHV4-55-201ENST00000520889 ARHGEF10O15013 1369 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms