RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 STAC3Q96MF2 364 aa9.36□□□□□ -0.91
CTNNA1-222ENST00000520400 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
CTNNA1-222ENST00000520400 FLIIQ13045 1269 aa9.35□□□□□ -0.91
CTNNA1-222ENST00000520400 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
CTNNA1-222ENST00000520400 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-222ENST00000520400 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-222ENST00000520400 SLC4A3P48751 1232 aa9.34□□□□□ -0.91
CTNNA1-222ENST00000520400 CTDSPL2Q05D32 466 aa9.34□□□□□ -0.91
CTNNA1-222ENST00000520400 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-222ENST00000520400 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-222ENST00000520400 AP1G2O75843 785 aa9.33□□□□□ -0.92
CTNNA1-222ENST00000520400 MTMR2Q13614 643 aa9.33□□□□□ -0.92
CTNNA1-222ENST00000520400 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
CTNNA1-222ENST00000520400 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-222ENST00000520400 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
CTNNA1-222ENST00000520400 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
CTNNA1-222ENST00000520400 USP17L8P0C7I0 530 aa9.32□□□□□ -0.92
CTNNA1-222ENST00000520400 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
CTNNA1-222ENST00000520400 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 GPR37L1O60883 481 aa9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 SCUBE3Q8IX30 993 aa9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 LRRN4Q8WUT4 740 aa9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
CTNNA1-222ENST00000520400 BRICD5Q6PL45 260 aa9.3□□□□□ -0.92
CTNNA1-222ENST00000520400 PRR7Q8TB68 274 aa9.3□□□□□ -0.92
CTNNA1-222ENST00000520400 EPS8L1Q8TE68 723 aa9.3□□□□□ -0.92
CTNNA1-222ENST00000520400 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-222ENST00000520400 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
CTNNA1-222ENST00000520400 PCDHB3Q9Y5E6 796 aa9.3□□□□□ -0.92
CTNNA1-222ENST00000520400 PTPN5P54829 565 aa9.29□□□□□ -0.92
CTNNA1-222ENST00000520400 COPS2P61201 443 aa9.29□□□□□ -0.92
CTNNA1-222ENST00000520400 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
CTNNA1-222ENST00000520400 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-222ENST00000520400 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
CTNNA1-222ENST00000520400 TLL1O43897 1013 aa9.27□□□□□ -0.93
CTNNA1-222ENST00000520400 RETREG3Q86VR2 466 aa9.27□□□□□ -0.93
CTNNA1-222ENST00000520400 FNBP4Q8N3X1 1017 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-222ENST00000520400 TSC1Q92574 1164 aa9.27□□□□□ -0.93
CTNNA1-222ENST00000520400 A6NJR5 290 aa9.26□□□□□ -0.93
CTNNA1-222ENST00000520400 FAM160A2Q8N612 972 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-222ENST00000520400 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
CTNNA1-222ENST00000520400 NECTIN2Q92692 538 aa9.26□□□□□ -0.93
CTNNA1-222ENST00000520400 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
CTNNA1-222ENST00000520400 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
CTNNA1-222ENST00000520400 PRR14Q9BWN1 585 aa9.25□□□□□ -0.93
CTNNA1-222ENST00000520400 GDPD2Q9HCC8 539 aa9.25□□□□□ -0.93
CTNNA1-222ENST00000520400 PRDM9Q9NQV7 894 aa9.25□□□□□ -0.93
CTNNA1-222ENST00000520400 MYT1LQ9UL68 1186 aa9.25□□□□□ -0.93
CTNNA1-222ENST00000520400 TJAP1Q5JTD0 557 aa9.24□□□□□ -0.93
CTNNA1-222ENST00000520400 MTRQ99707 1265 aa9.24□□□□□ -0.93
CTNNA1-222ENST00000520400 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-222ENST00000520400 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
CTNNA1-222ENST00000520400 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-222ENST00000520400 TRAK2O60296 914 aa9.22□□□□□ -0.93
CTNNA1-222ENST00000520400 NR1I2O75469 434 aa9.22□□□□□ -0.93
CTNNA1-222ENST00000520400 Q3C1V9 767 aa9.22□□□□□ -0.93
CTNNA1-222ENST00000520400 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
CTNNA1-222ENST00000520400 IRF5Q13568 498 aa9.21□□□□□ -0.94
CTNNA1-222ENST00000520400 PROSER2Q86WR7 435 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-222ENST00000520400 NKX2-3Q8TAU0 364 aa9.21□□□□□ -0.94
CTNNA1-222ENST00000520400 SOCS7O14512 581 aa9.2□□□□□ -0.94
CTNNA1-222ENST00000520400 ZPR1O75312 459 aa9.2□□□□□ -0.94
CTNNA1-222ENST00000520400 FMNL1O95466 1100 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-222ENST00000520400 NR6A1Q15406 480 aa9.2□□□□□ -0.94
CTNNA1-222ENST00000520400 LYPD8Q6UX82 237 aa9.2□□□□□ -0.94
CTNNA1-222ENST00000520400 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-222ENST00000520400 DESI1Q6ICB0 168 aa9.19□□□□□ -0.94
CTNNA1-222ENST00000520400 SPSB2Q99619 263 aa9.19□□□□□ -0.94
CTNNA1-222ENST00000520400 POM121CA8CG34 1229 aa9.17□□□□□ -0.94
CTNNA1-222ENST00000520400 F12P00748 615 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-222ENST00000520400 JUNDP17535 347 aa9.17□□□□□ -0.94
CTNNA1-222ENST00000520400 ABL2P42684 1182 aa9.17□□□□□ -0.94
CTNNA1-222ENST00000520400 MAP10Q9P2G4 905 aa9.17□□□□□ -0.94
CTNNA1-222ENST00000520400 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-222ENST00000520400 DXOO77932 396 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-222ENST00000520400 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
CTNNA1-222ENST00000520400 APBB1O00213 710 aa9.15□□□□□ -0.94
CTNNA1-222ENST00000520400 ADH1BP00325 375 aa9.15□□□□□ -0.94
CTNNA1-222ENST00000520400 MMP16P51512 607 aa9.15□□□□□ -0.94
CTNNA1-222ENST00000520400 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
CTNNA1-222ENST00000520400 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-222ENST00000520400 RAD21O60216 631 aa9.14□□□□□ -0.95
CTNNA1-222ENST00000520400 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
CTNNA1-222ENST00000520400 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
CTNNA1-222ENST00000520400 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
CTNNA1-222ENST00000520400 PTPRNQ16849 979 aa9.12□□□□□ -0.95
CTNNA1-222ENST00000520400 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-222ENST00000520400 S1PR4O95977 384 aa9.1□□□□□ -0.95
CTNNA1-222ENST00000520400 ZNF330Q9Y3S2 320 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-222ENST00000520400 VAC14Q08AM6 782 aa9.09□□□□□ -0.95
CTNNA1-222ENST00000520400 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
CTNNA1-222ENST00000520400 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
CTNNA1-222ENST00000520400 PPEF1O14829 653 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-222ENST00000520400 CCNYL3P0C7X3 344 aa9.08□□□□□ -0.96
CTNNA1-222ENST00000520400 CCDC82Q8N4S0 544 aa9.08□□□□□ -0.96
CTNNA1-222ENST00000520400 ARID3AQ99856 593 aa9.08□□□□□ -0.96
CTNNA1-222ENST00000520400 OCSTAMPQ9BR26 566 aa9.08□□□□□ -0.96
CTNNA1-222ENST00000520400 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms