RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
SKP1-205ENST00000519054 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
SKP1-205ENST00000519054 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
SKP1-205ENST00000519054 FAM160A2Q8N612 972 aaPredicted RBP8.52□□□□□ -1.05
SKP1-205ENST00000519054 SLC6A16Q9GZN6 736 aa8.52□□□□□ -1.05
SKP1-205ENST00000519054 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
SKP1-205ENST00000519054 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
SKP1-205ENST00000519054 SPTLC1O15269 473 aa8.51□□□□□ -1.05
SKP1-205ENST00000519054 PRDM9Q9NQV7 894 aa8.51□□□□□ -1.05
SKP1-205ENST00000519054 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
SKP1-205ENST00000519054 LIMD1Q9UGP4 676 aa8.51□□□□□ -1.05
SKP1-205ENST00000519054 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
SKP1-205ENST00000519054 GJA5P36382 358 aa8.5□□□□□ -1.05
SKP1-205ENST00000519054 GGCXP38435 758 aa8.5□□□□□ -1.05
SKP1-205ENST00000519054 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
SKP1-205ENST00000519054 PPEF1O14829 653 aaPredicted RBP8.49□□□□□ -1.05
SKP1-205ENST00000519054 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
SKP1-205ENST00000519054 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
SKP1-205ENST00000519054 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
SKP1-205ENST00000519054 MTMR2Q13614 643 aa8.48□□□□□ -1.05
SKP1-205ENST00000519054 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
SKP1-205ENST00000519054 SH3D19Q5HYK7 790 aa8.48□□□□□ -1.05
SKP1-205ENST00000519054 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
SKP1-205ENST00000519054 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
SKP1-205ENST00000519054 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
SKP1-205ENST00000519054 HRCP23327 699 aa8.46□□□□□ -1.06
SKP1-205ENST00000519054 QPCTQ16769 361 aa8.46□□□□□ -1.06
SKP1-205ENST00000519054 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
SKP1-205ENST00000519054 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
SKP1-205ENST00000519054 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
SKP1-205ENST00000519054 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
SKP1-205ENST00000519054 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
SKP1-205ENST00000519054 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
SKP1-205ENST00000519054 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
SKP1-205ENST00000519054 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
SKP1-205ENST00000519054 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
SKP1-205ENST00000519054 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
SKP1-205ENST00000519054 LILRB3O75022 631 aa8.43□□□□□ -1.06
SKP1-205ENST00000519054 DXOO77932 396 aaKnown RBP8.43□□□□□ -1.06
SKP1-205ENST00000519054 MMP16P51512 607 aa8.43□□□□□ -1.06
SKP1-205ENST00000519054 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
SKP1-205ENST00000519054 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
SKP1-205ENST00000519054 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
SKP1-205ENST00000519054 JUNDP17535 347 aa8.42□□□□□ -1.06
SKP1-205ENST00000519054 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
SKP1-205ENST00000519054 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
SKP1-205ENST00000519054 TSC1Q92574 1164 aa8.41□□□□□ -1.06
SKP1-205ENST00000519054 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
SKP1-205ENST00000519054 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
SKP1-205ENST00000519054 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
SKP1-205ENST00000519054 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
SKP1-205ENST00000519054 GOPCQ9HD26 462 aa8.4□□□□□ -1.06
SKP1-205ENST00000519054 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
SKP1-205ENST00000519054 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
SKP1-205ENST00000519054 RGS20O76081 388 aa8.38□□□□□ -1.07
SKP1-205ENST00000519054 SLC19A1P41440 591 aa8.37□□□□□ -1.07
SKP1-205ENST00000519054 DESI1Q6ICB0 168 aa8.37□□□□□ -1.07
SKP1-205ENST00000519054 LIAT1Q6ZQX7 453 aa8.37□□□□□ -1.07
SKP1-205ENST00000519054 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
SKP1-205ENST00000519054 PER1O15534 1290 aaPredicted RBP8.35□□□□□ -1.07
SKP1-205ENST00000519054 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
SKP1-205ENST00000519054 PTPRNQ16849 979 aa8.35□□□□□ -1.07
SKP1-205ENST00000519054 PPP2R2DQ66LE6 453 aa8.35□□□□□ -1.07
SKP1-205ENST00000519054 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
SKP1-205ENST00000519054 V9GY48 417 aaPredicted RBP8.35□□□□□ -1.07
SKP1-205ENST00000519054 ZBTB24O43167 697 aaPredicted RBP8.34□□□□□ -1.07
SKP1-205ENST00000519054 LYPD8Q6UX82 237 aa8.34□□□□□ -1.07
SKP1-205ENST00000519054 RFC5P40937 340 aa8.33□□□□□ -1.08
SKP1-205ENST00000519054 CTDSPL2Q05D32 466 aa8.33□□□□□ -1.08
SKP1-205ENST00000519054 AP1G2O75843 785 aa8.32□□□□□ -1.08
SKP1-205ENST00000519054 CTHP32929 405 aa8.32□□□□□ -1.08
SKP1-205ENST00000519054 RPIAP49247 311 aa8.32□□□□□ -1.08
SKP1-205ENST00000519054 SPRYD7Q5W111 196 aa8.32□□□□□ -1.08
SKP1-205ENST00000519054 PTCRAQ6ISU1 281 aaPredicted RBP8.32□□□□□ -1.08
SKP1-205ENST00000519054 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
SKP1-205ENST00000519054 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
SKP1-205ENST00000519054 ZNF697Q5TEC3 545 aa8.3□□□□□ -1.08
SKP1-205ENST00000519054 MAP10Q9P2G4 905 aa8.3□□□□□ -1.08
SKP1-205ENST00000519054 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
SKP1-205ENST00000519054 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
SKP1-205ENST00000519054 TRIM32Q13049 653 aa8.29□□□□□ -1.08
SKP1-205ENST00000519054 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
SKP1-205ENST00000519054 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
SKP1-205ENST00000519054 UNC93B1Q9H1C4 597 aa8.29□□□□□ -1.08
SKP1-205ENST00000519054 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
SKP1-205ENST00000519054 FOXC1Q12948 553 aa8.26□□□□□ -1.09
SKP1-205ENST00000519054 TMEM259Q4ZIN3 620 aa8.26□□□□□ -1.09
SKP1-205ENST00000519054 TMEM132AQ24JP5 1023 aa8.25□□□□□ -1.09
SKP1-205ENST00000519054 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
SKP1-205ENST00000519054 TNFRSF10AO00220 468 aa8.24□□□□□ -1.09
SKP1-205ENST00000519054 SKOR1P84550 965 aa8.24□□□□□ -1.09
SKP1-205ENST00000519054 BAP1Q92560 729 aa8.24□□□□□ -1.09
SKP1-205ENST00000519054 IRX2Q9BZI1 471 aaPredicted RBP8.24□□□□□ -1.09
SKP1-205ENST00000519054 HMX1Q9NP08 348 aaPredicted RBP8.24□□□□□ -1.09
SKP1-205ENST00000519054 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
SKP1-205ENST00000519054 NR6A1Q15406 480 aa8.23□□□□□ -1.09
SKP1-205ENST00000519054 TRIM67Q6ZTA4 783 aa8.23□□□□□ -1.09
SKP1-205ENST00000519054 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
SKP1-205ENST00000519054 PKD2L1Q9P0L9 805 aa8.22□□□□□ -1.09
SKP1-205ENST00000519054 GDF9O60383 454 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms