RNA–Protein interactions for RNA: ENST00000518682.1

SOD1P3-201, Transcript of superoxide dismutase 1 pseudogene 3, humanhuman

BASIC

Gene SOD1P3, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P3-201ENST00000518682 TATDN2Q93075 761 aa7.2□□□□□ -1.26
SOD1P3-201ENST00000518682 ZBTB3Q9H5J0 574 aa7.2□□□□□ -1.26
SOD1P3-201ENST00000518682 HMX1Q9NP08 348 aaPredicted RBP7.2□□□□□ -1.26
SOD1P3-201ENST00000518682 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
SOD1P3-201ENST00000518682 URB2Q14146 1524 aaKnown RBP7.2□□□□□ -1.26
SOD1P3-201ENST00000518682 GPR37L1O60883 481 aa7.19□□□□□ -1.26
SOD1P3-201ENST00000518682 BRD1O95696 1058 aa7.19□□□□□ -1.26
SOD1P3-201ENST00000518682 CTDSPL2Q05D32 466 aa7.19□□□□□ -1.26
SOD1P3-201ENST00000518682 RDH13Q8NBN7 331 aa7.19□□□□□ -1.26
SOD1P3-201ENST00000518682 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
SOD1P3-201ENST00000518682 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 NBPF26B4DH59 902 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 PATL2C9JE40 543 aaKnown RBP7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 CSB-PGBD3P0DP91 1061 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 FDX1P10109 184 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 KCNA1Q09470 495 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 GPR153Q6NV75 609 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 PPP1R12CQ9BZL4 782 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 BCL2L12Q9HB09 334 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 PCDHGC3Q9UN70 934 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 LHX6Q9UPM6 363 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 USTQ9Y2C2 406 aa7.18□□□□□ -1.26
SOD1P3-201ENST00000518682 ZNF608Q9ULD9 1512 aaPredicted RBP7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 TRIM6-TRIM34B2RNG4 842 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 PPP1R3GB7ZBB8 358 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 SMAPO00193 183 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 HOXA2O43364 376 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 POTEIP0CG38 1075 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 HOXB3P14651 431 aaPredicted RBP7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 GCGRP47871 477 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 USP46P62068 366 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 VAC14Q08AM6 782 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 CYB5RLQ6IPT4 315 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 PACS2Q86VP3 889 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 ZNF428Q96B54 188 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 ALG2Q9H553 416 aa7.17□□□□□ -1.26
SOD1P3-201ENST00000518682 GUCA2AQ02747 115 aa7.16□□□□□ -1.26
SOD1P3-201ENST00000518682 DOK7Q18PE1 504 aa7.16□□□□□ -1.26
SOD1P3-201ENST00000518682 PPP4R3BQ5MIZ7 849 aa7.16□□□□□ -1.26
SOD1P3-201ENST00000518682 PALM3A6NDB9 673 aaPredicted RBP7.15□□□□□ -1.26
SOD1P3-201ENST00000518682 PTPREP23469 700 aa7.15□□□□□ -1.26
SOD1P3-201ENST00000518682 RBM25P49756 843 aaKnown RBP7.15□□□□□ -1.26
SOD1P3-201ENST00000518682 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.26
SOD1P3-201ENST00000518682 HLA-CQ95604 372 aa7.15□□□□□ -1.26
SOD1P3-201ENST00000518682 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
SOD1P3-201ENST00000518682 ARAP1Q96P48 1450 aa7.14□□□□□ -1.27
SOD1P3-201ENST00000518682 ZSWIM6Q9HCJ5 1215 aa7.14□□□□□ -1.27
SOD1P3-201ENST00000518682 TFIP11Q9UBB9 837 aaKnown RBP7.14□□□□□ -1.27
SOD1P3-201ENST00000518682 SLC10A3P09131 477 aa7.13□□□□□ -1.27
SOD1P3-201ENST00000518682 RSPH4AQ5TD94 716 aa7.13□□□□□ -1.27
SOD1P3-201ENST00000518682 EPS8L1Q8TE68 723 aa7.13□□□□□ -1.27
SOD1P3-201ENST00000518682 CHD1O14646 1710 aa7.13□□□□□ -1.27
SOD1P3-201ENST00000518682 CFTRP13569 1480 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 CFAP99D6REC4 459 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 RIMBP2O15034 1052 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 MTMR2Q13614 643 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 PROX2Q3B8N5 592 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 CDCA8Q53HL2 280 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 PRR7Q8TB68 274 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 TSC1Q92574 1164 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 EIF4G3O43432 1585 aaKnown RBP7.12□□□□□ -1.27
SOD1P3-201ENST00000518682 PSDA5PKW4 1024 aaPredicted RBP7.11□□□□□ -1.27
SOD1P3-201ENST00000518682 HELBQ8NG08 1087 aaPredicted RBP7.11□□□□□ -1.27
SOD1P3-201ENST00000518682 VRTNQ9H8Y1 702 aa7.11□□□□□ -1.27
SOD1P3-201ENST00000518682 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
SOD1P3-201ENST00000518682 TMEM88BA6NKF7 163 aa7.09□□□□□ -1.27
SOD1P3-201ENST00000518682 ATG7O95352 703 aa7.09□□□□□ -1.27
SOD1P3-201ENST00000518682 KIAA1468Q9P260 1216 aa7.09□□□□□ -1.27
SOD1P3-201ENST00000518682 C6orf229H3BNL8 230 aa7.08□□□□□ -1.28
SOD1P3-201ENST00000518682 SOX11P35716 441 aa7.08□□□□□ -1.28
SOD1P3-201ENST00000518682 SEMA3FQ13275 785 aa7.08□□□□□ -1.28
SOD1P3-201ENST00000518682 SWT1Q5T5J6 900 aaKnown RBP7.08□□□□□ -1.28
SOD1P3-201ENST00000518682 IFT140Q96RY7 1462 aa7.08□□□□□ -1.28
SOD1P3-201ENST00000518682 NR6A1Q15406 480 aa7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 CCDC27Q2M243 656 aa7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 TBC1D9Q6ZT07 1266 aa7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 SLF2Q8IX21 1173 aa7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 SYMPKQ92797 1274 aaKnown RBP7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 MAFBQ9Y5Q3 323 aaPredicted RBP7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 PRDM2Q13029 1718 aa7.07□□□□□ -1.28
SOD1P3-201ENST00000518682 E9PSI1 815 aa7.06□□□□□ -1.28
SOD1P3-201ENST00000518682 POTEJP0CG39 1038 aa7.06□□□□□ -1.28
SOD1P3-201ENST00000518682 SND1Q7KZF4 910 aaKnown RBP eCLIP7.06□□□□□ -1.28
SOD1P3-201ENST00000518682 KCNK17Q96T54 332 aa7.06□□□□□ -1.28
SOD1P3-201ENST00000518682 AQRO60306 1485 aaKnown RBP eCLIP7.05□□□□□ -1.28
SOD1P3-201ENST00000518682 PER1O15534 1290 aaPredicted RBP7.05□□□□□ -1.28
SOD1P3-201ENST00000518682 FUT2Q10981 343 aa7.05□□□□□ -1.28
SOD1P3-201ENST00000518682 TOPBP1Q92547 1522 aa7.05□□□□□ -1.28
SOD1P3-201ENST00000518682 ATP9BO43861 1147 aa7.04□□□□□ -1.28
SOD1P3-201ENST00000518682 GRIPAP1Q4V328 841 aa7.04□□□□□ -1.28
SOD1P3-201ENST00000518682 TOP2AP11388 1531 aaKnown RBP7.04□□□□□ -1.28
SOD1P3-201ENST00000518682 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
SOD1P3-201ENST00000518682 PNMA1Q8ND90 353 aa7.03□□□□□ -1.28
SOD1P3-201ENST00000518682 ZBED2Q9BTP6 218 aa7.03□□□□□ -1.28
SOD1P3-201ENST00000518682 AMOTL2Q9Y2J4 779 aa7.03□□□□□ -1.28
SOD1P3-201ENST00000518682 TARBP1Q13395 1621 aaKnown RBP7.02□□□□□ -1.29
SOD1P3-201ENST00000518682 LOC105371045A0A1W2PR82 267 aa7.02□□□□□ -1.29
SOD1P3-201ENST00000518682 ATP6V1AP38606 617 aa7.02□□□□□ -1.29
SOD1P3-201ENST00000518682 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms