RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 C9orf131Q5VYM1 1079 aa5.64□□□□□ -1.51
RNU4-60P-201ENST00000517239 PADI6Q6TGC4 694 aa5.64□□□□□ -1.51
RNU4-60P-201ENST00000517239 RECKO95980 971 aa5.63□□□□□ -1.51
RNU4-60P-201ENST00000517239 BCL11AQ9H165 835 aa5.63□□□□□ -1.51
RNU4-60P-201ENST00000517239 TRPC6Q9Y210 931 aa5.63□□□□□ -1.51
RNU4-60P-201ENST00000517239 PHF14O94880 888 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 C7P10643 843 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 CD46P15529 392 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 GJA5P36382 358 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 FOSBP53539 338 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 PRPF38BQ5VTL8 546 aaKnown RBP5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 CC2D2BQ6DHV5 1058 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 NOP9Q86U38 636 aaKnown RBP5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 TSC1Q92574 1164 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 DNAJC2Q99543 621 aaKnown RBP5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 SLAIN2Q9P270 581 aa5.62□□□□□ -1.51
RNU4-60P-201ENST00000517239 PRKAR2AP13861 404 aaKnown RBP5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 ATP2B4P23634 1241 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 SCNN1AP37088 669 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 FBXO33Q7Z6M2 555 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 LRRN4Q8WUT4 740 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 PHF12Q96QT6 1004 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 ZBTB3Q9H5J0 574 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 ANO8Q9HCE9 1232 aaPredicted RBP5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 SBNO2Q9Y2G9 1366 aa5.61□□□□□ -1.51
RNU4-60P-201ENST00000517239 DDX11L8A8MPP1 907 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 EIF4G2P78344 907 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 CACNB1Q02641 598 aaPredicted RBP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 TMED8Q6PL24 325 aaPredicted RBP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 SLAIN1Q8ND83 568 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 PNMA1Q8ND90 353 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 RBM46Q8TBY0 533 aaKnown RBP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 FAM200AQ8TCP9 573 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 EPS8L1Q8TE68 723 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 BACH2Q9BYV9 841 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 LNPKQ9C0E8 428 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 ZRANB1Q9UGI0 708 aa5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 TMA7Q9Y2S6 64 aaKnown RBP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.6□□□□□ -1.51
RNU4-60P-201ENST00000517239 TLDC2A0PJX2 215 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 G3V3G9 751 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 RAB11FIP3O75154 756 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 CLSTN1O94985 981 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 ABL1P00519 1130 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 MAPK1P28482 360 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 HDLBPQ00341 1268 aaKnown RBP5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 PIK3R5Q8WYR1 880 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 PCDHGA10Q9Y5H3 936 aa5.59□□□□□ -1.51
RNU4-60P-201ENST00000517239 USP17L3A6NCW0 530 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L4A6NCW7 530 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 PIK3CDO00329 1044 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 SKIP12755 728 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 FAM69CQ0P6D2 419 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 TAF7LQ5H9L4 462 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 TYW1BQ6NUM6 668 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 LARP1Q6PKG0 1096 aaKnown RBP5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L2Q6R6M4 530 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L1Q7RTZ2 530 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 TICAM2Q86XR7 235 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 SULF1Q8IWU6 871 aa5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 DHX38Q92620 1227 aaKnown RBP5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 CLP1Q92989 425 aaKnown RBP5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 CDCA7Q9BWT1 371 aaPredicted RBP5.58□□□□□ -1.52
RNU4-60P-201ENST00000517239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 LOC102724159A0A0B4J2E5 919 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L10C9JJH3 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L12C9JPN9 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L21D6R901 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 SCAMP3O14828 347 aaKnown RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 GTF2F1P35269 517 aaKnown RBP eCLIP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 PWP2Q15269 919 aaKnown RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 CCDC144BQ3MJ40 725 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 DEPDC4Q8N2C3 294 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 HELBQ8NG08 1087 aaPredicted RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 TMEM121BQ9BXQ6 578 aaPredicted RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 ANO2Q9NQ90 1003 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 CUEDC1Q9NWM3 386 aaPredicted RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 MKRN1Q9UHC7 482 aaKnown RBP5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 BOLA1Q9Y3E2 137 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 PPME1Q9Y570 386 aa5.57□□□□□ -1.52
RNU4-60P-201ENST00000517239 RCCD1A6NED2 376 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 PLEKHD1A6NEE1 506 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 FAM196BA6NMK8 535 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 RASA1P20936 1047 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 IGBP1P78318 339 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 CRTC2Q53ET0 693 aaPredicted RBP5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 EAPPQ56P03 285 aaPredicted RBP5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 ZSCAN29Q8IWY8 852 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms