RNA–Protein interactions for RNA: ENST00000516998.1

RNU6-1006P-201, Transcript of RNA, U6 small nuclear 1006, pseudogene, humanhuman

BASIC

Gene RNU6-1006P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1006P-201ENST00000516998 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
RNU6-1006P-201ENST00000516998 ZFP42Q96MM3 310 aa3.65□□□□□ -1.83
RNU6-1006P-201ENST00000516998 SLC4A3P48751 1232 aa3.64□□□□□ -1.83
RNU6-1006P-201ENST00000516998 MARSP56192 900 aaKnown RBP3.64□□□□□ -1.83
RNU6-1006P-201ENST00000516998 GPR161Q8N6U8 529 aaKnown RBP3.64□□□□□ -1.83
RNU6-1006P-201ENST00000516998 DCAF5Q96JK2 942 aa3.64□□□□□ -1.83
RNU6-1006P-201ENST00000516998 PRR14Q9BWN1 585 aa3.64□□□□□ -1.83
RNU6-1006P-201ENST00000516998 ARHGEF15O94989 841 aa3.63□□□□□ -1.83
RNU6-1006P-201ENST00000516998 EN1Q05925 392 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1006P-201ENST00000516998 NKX1-1Q15270 411 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1006P-201ENST00000516998 BAG6P46379 1132 aa3.62□□□□□ -1.83
RNU6-1006P-201ENST00000516998 MFSD10Q14728 455 aa3.61□□□□□ -1.83
RNU6-1006P-201ENST00000516998 CAPN5O15484 640 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1006P-201ENST00000516998 COBLO75128 1261 aa3.6□□□□□ -1.83
RNU6-1006P-201ENST00000516998 PPFIA3O75145 1194 aa3.6□□□□□ -1.83
RNU6-1006P-201ENST00000516998 ITGB7P26010 798 aa3.6□□□□□ -1.83
RNU6-1006P-201ENST00000516998 SCARF2Q96GP6 870 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1006P-201ENST00000516998 ACTN4O43707 911 aaKnown RBP3.59□□□□□ -1.83
RNU6-1006P-201ENST00000516998 SPSB2Q99619 263 aa3.59□□□□□ -1.83
RNU6-1006P-201ENST00000516998 ARID1BQ8NFD5 2236 aaPredicted RBP3.59□□□□□ -1.84
RNU6-1006P-201ENST00000516998 NR1I2O75469 434 aa3.58□□□□□ -1.84
RNU6-1006P-201ENST00000516998 PRIM1P49642 420 aaKnown RBP3.58□□□□□ -1.84
RNU6-1006P-201ENST00000516998 RNFT1Q5M7Z0 435 aa3.58□□□□□ -1.84
RNU6-1006P-201ENST00000516998 SCUBE3Q8IX30 993 aa3.58□□□□□ -1.84
RNU6-1006P-201ENST00000516998 CERKQ8TCT0 537 aa3.58□□□□□ -1.84
RNU6-1006P-201ENST00000516998 PRDM9Q9NQV7 894 aa3.58□□□□□ -1.84
RNU6-1006P-201ENST00000516998 GRXCR2A6NFK2 248 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 ALDH1A1P00352 501 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 CFHP08603 1231 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 SLURP2P0DP57 97 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 COL25A1Q9BXS0 654 aaPredicted RBP3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 KRTAP4-5Q9BYR2 181 aa3.57□□□□□ -1.84
RNU6-1006P-201ENST00000516998 CNTNAP5Q8WYK1 1306 aa3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 ZBTB24O43167 697 aaPredicted RBP3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 TRIM32Q13049 653 aa3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 LAMC2Q13753 1193 aa3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 PUS10Q3MIT2 529 aaKnown RBP3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 PURBQ96QR8 312 aaKnown RBP3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 CDHR5Q9HBB8 845 aa3.56□□□□□ -1.84
RNU6-1006P-201ENST00000516998 KMT5BQ4FZB7 885 aa3.55□□□□□ -1.84
RNU6-1006P-201ENST00000516998 ZMYM1Q5SVZ6 1142 aa3.55□□□□□ -1.84
RNU6-1006P-201ENST00000516998 PADI6Q6TGC4 694 aa3.55□□□□□ -1.84
RNU6-1006P-201ENST00000516998 GTPBP6O43824 516 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1006P-201ENST00000516998 CADPS2Q86UW7 1296 aa3.54□□□□□ -1.84
RNU6-1006P-201ENST00000516998 FAM160A2Q8N612 972 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1006P-201ENST00000516998 SCO2A0A1W2PP80 73 aa3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 SKOR1P84550 965 aa3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 CAMK2BQ13554 666 aa3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 RC3H1Q5TC82 1133 aaKnown RBP3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 MRPL14Q6P1L8 145 aaKnown RBP3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 LYPD4Q6UWN0 246 aa3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 REPIN1Q9BWE0 567 aaKnown RBP3.52□□□□□ -1.85
RNU6-1006P-201ENST00000516998 PDIA6Q15084 440 aa3.51□□□□□ -1.85
RNU6-1006P-201ENST00000516998 FOXD4L6Q3SYB3 417 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1006P-201ENST00000516998 FOXD4L3Q6VB84 417 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1006P-201ENST00000516998 EYA1Q99502 592 aa3.51□□□□□ -1.85
RNU6-1006P-201ENST00000516998 DNAJC5Q9H3Z4 198 aa3.51□□□□□ -1.85
RNU6-1006P-201ENST00000516998 SPDYE16A6NNV3 312 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1006P-201ENST00000516998 MAN1A2O60476 641 aa3.5□□□□□ -1.85
RNU6-1006P-201ENST00000516998 SLC10A3P09131 477 aa3.5□□□□□ -1.85
RNU6-1006P-201ENST00000516998 TTC13Q8NBP0 860 aa3.5□□□□□ -1.85
RNU6-1006P-201ENST00000516998 RBM27Q9P2N5 1060 aaKnown RBP3.5□□□□□ -1.85
RNU6-1006P-201ENST00000516998 KRBA1A5PL33 1030 aa3.49□□□□□ -1.85
RNU6-1006P-201ENST00000516998 DCAF8L2P0C7V8 631 aa3.49□□□□□ -1.85
RNU6-1006P-201ENST00000516998 THAP11Q96EK4 314 aa3.49□□□□□ -1.85
RNU6-1006P-201ENST00000516998 DNAJB2P25686 324 aa3.48□□□□□ -1.85
RNU6-1006P-201ENST00000516998 SCARF1Q14162 830 aa3.48□□□□□ -1.85
RNU6-1006P-201ENST00000516998 WASF2Q9Y6W5 498 aa3.48□□□□□ -1.85
RNU6-1006P-201ENST00000516998 PHF20L1A8MW92 1017 aa3.47□□□□□ -1.85
RNU6-1006P-201ENST00000516998 SEMA6BQ9H3T3 888 aa3.47□□□□□ -1.85
RNU6-1006P-201ENST00000516998 ADAMTS2O95450 1211 aa3.46□□□□□ -1.86
RNU6-1006P-201ENST00000516998 CELA2BP08218 269 aaPredicted RBP3.46□□□□□ -1.86
RNU6-1006P-201ENST00000516998 OSBPP22059 807 aa3.46□□□□□ -1.86
RNU6-1006P-201ENST00000516998 MAP3K10Q02779 954 aa3.46□□□□□ -1.86
RNU6-1006P-201ENST00000516998 C6orf118Q5T5N4 469 aa3.46□□□□□ -1.86
RNU6-1006P-201ENST00000516998 RBM46Q8TBY0 533 aaKnown RBP3.46□□□□□ -1.86
RNU6-1006P-201ENST00000516998 SIAH2O43255 324 aa3.45□□□□□ -1.86
RNU6-1006P-201ENST00000516998 FECHP22830 423 aa3.45□□□□□ -1.86
RNU6-1006P-201ENST00000516998 FAM161AQ3B820 660 aa3.45□□□□□ -1.86
RNU6-1006P-201ENST00000516998 TMEM134Q9H6X4 195 aa3.45□□□□□ -1.86
RNU6-1006P-201ENST00000516998 RCCD1A6NED2 376 aa3.44□□□□□ -1.86
RNU6-1006P-201ENST00000516998 ZFP64Q9NPA5 681 aa3.44□□□□□ -1.86
RNU6-1006P-201ENST00000516998 NPDC1Q9NQX5 325 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1006P-201ENST00000516998 DNMT3LQ9UJW3 386 aa3.44□□□□□ -1.86
RNU6-1006P-201ENST00000516998 YBX3P16989 372 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU6-1006P-201ENST00000516998 ARTNQ5T4W7 220 aa3.43□□□□□ -1.86
RNU6-1006P-201ENST00000516998 RSPH4AQ5TD94 716 aa3.43□□□□□ -1.86
RNU6-1006P-201ENST00000516998 NBPF11Q86T75 865 aa3.43□□□□□ -1.86
RNU6-1006P-201ENST00000516998 BEND7Q8N7W2 519 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1006P-201ENST00000516998 FMNL1O95466 1100 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1006P-201ENST00000516998 TIMP2P16035 220 aa3.42□□□□□ -1.86
RNU6-1006P-201ENST00000516998 FZD5Q13467 585 aa3.42□□□□□ -1.86
RNU6-1006P-201ENST00000516998 E2F4Q16254 413 aa3.42□□□□□ -1.86
RNU6-1006P-201ENST00000516998 RDH13Q8NBN7 331 aa3.42□□□□□ -1.86
RNU6-1006P-201ENST00000516998 CDC14CA4D256 554 aa3.41□□□□□ -1.86
RNU6-1006P-201ENST00000516998 WNT7BP56706 349 aa3.41□□□□□ -1.86
RNU6-1006P-201ENST00000516998 MORN1Q5T089 497 aa3.41□□□□□ -1.86
RNU6-1006P-201ENST00000516998 RNF19BQ6ZMZ0 732 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms