RNA–Protein interactions for RNA: ENST00000516539.1

RNU6-1256P-201, Transcript of RNA, U6 small nuclear 1256, pseudogene, humanhuman

BASIC

Gene RNU6-1256P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1256P-201ENST00000516539 PCDHGC3Q9UN70 934 aa5.49□□□□□ -1.53
RNU6-1256P-201ENST00000516539 GPR37L1O60883 481 aa5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 CTDSPL2Q05D32 466 aa5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 VAC14Q08AM6 782 aa5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 SWT1Q5T5J6 900 aaKnown RBP5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 B4GALNT3Q6L9W6 998 aa5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 SLF2Q8IX21 1173 aa5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 ALG2Q9H553 416 aa5.48□□□□□ -1.53
RNU6-1256P-201ENST00000516539 PALM3A6NDB9 673 aaPredicted RBP5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 C6orf229H3BNL8 230 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 SLC10A3P09131 477 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 HOXB1P14653 301 aaPredicted RBP5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 RFX1P22670 979 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 GUCA2AQ02747 115 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 RGS22Q8NE09 1264 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 ZBED2Q9BTP6 218 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 KIAA1468Q9P260 1216 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 RABGEF1Q9UJ41 708 aa5.47□□□□□ -1.53
RNU6-1256P-201ENST00000516539 CFAP99D6REC4 459 aa5.46□□□□□ -1.54
RNU6-1256P-201ENST00000516539 EIF4G2P78344 907 aaKnown RBP eCLIP5.46□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SRPK2P78362 688 aaKnown RBP5.46□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SEMA3FQ13275 785 aa5.46□□□□□ -1.54
RNU6-1256P-201ENST00000516539 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ATG7O95352 703 aa5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 CFHP08603 1231 aa5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 LMOD1P29536 600 aaPredicted RBP5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 FAM98CQ17RN3 349 aaKnown RBP5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 KMT5BQ4FZB7 885 aa5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 HLA-CQ95604 372 aa5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SLC4A5Q9BY07 1137 aa5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 MTMR7Q9Y216 660 aa5.45□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ATP6V1AP38606 617 aa5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 FUT2Q10981 343 aa5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 DESI1Q6ICB0 168 aa5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 RETREG3Q86VR2 466 aa5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 PRR7Q8TB68 274 aa5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SP7Q8TDD2 431 aaPredicted RBP5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 UCN2Q96RP3 112 aa5.44□□□□□ -1.54
RNU6-1256P-201ENST00000516539 Q3C1V9 767 aa5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 LAPTM4BQ86VI4 370 aa5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ZNF592Q92610 1267 aa5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 PRR14Q9BWN1 585 aa5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 NBPF3Q9H094 633 aa5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 MAFBQ9Y5Q3 323 aaPredicted RBP5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ZC3H4Q9UPT8 1303 aaKnown RBP5.43□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ATP9BO43861 1147 aa5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 NR1H3Q13133 447 aa5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 NR6A1Q15406 480 aa5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 CCDC27Q2M243 656 aa5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SND1Q7KZF4 910 aaKnown RBP eCLIP5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 VRTNQ9H8Y1 702 aa5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 TFIP11Q9UBB9 837 aaKnown RBP5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SEPT9Q9UHD8 586 aaPredicted RBP5.42□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ARHGAP33O14559 1287 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 RNF40O75150 1001 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 POTEJP0CG39 1038 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 PBX2P40425 430 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ELOAQ14241 798 aaKnown RBP5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 NFATC2IPQ8NCF5 419 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 EPS8L1Q8TE68 723 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 IVNS1ABPQ9Y6Y0 642 aa5.41□□□□□ -1.54
RNU6-1256P-201ENST00000516539 TMEM88BA6NKF7 163 aa5.4□□□□□ -1.54
RNU6-1256P-201ENST00000516539 SAMD7Q7Z3H4 446 aa5.4□□□□□ -1.54
RNU6-1256P-201ENST00000516539 AMOTL2Q9Y2J4 779 aa5.4□□□□□ -1.54
RNU6-1256P-201ENST00000516539 ZBBXA8MT70 800 aa5.39□□□□□ -1.55
RNU6-1256P-201ENST00000516539 RBM25P49756 843 aaKnown RBP5.39□□□□□ -1.55
RNU6-1256P-201ENST00000516539 PSEN2P49810 448 aa5.39□□□□□ -1.55
RNU6-1256P-201ENST00000516539 POTEHQ6S545 545 aa5.39□□□□□ -1.55
RNU6-1256P-201ENST00000516539 TBC1D9Q6ZT07 1266 aa5.39□□□□□ -1.55
RNU6-1256P-201ENST00000516539 GNEQ9Y223 722 aaKnown RBP5.39□□□□□ -1.55
RNU6-1256P-201ENST00000516539 PER1O15534 1290 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1256P-201ENST00000516539 ACTN4O43707 911 aaKnown RBP5.38□□□□□ -1.55
RNU6-1256P-201ENST00000516539 MORN1Q5T089 497 aa5.38□□□□□ -1.55
RNU6-1256P-201ENST00000516539 FOXD4L5Q5VV16 416 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1256P-201ENST00000516539 LYPD8Q6UX82 237 aa5.38□□□□□ -1.55
RNU6-1256P-201ENST00000516539 FOXD4L4Q8WXT5 416 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1256P-201ENST00000516539 PLEKHM2Q8IWE5 1019 aa5.37□□□□□ -1.55
RNU6-1256P-201ENST00000516539 CCER1Q8TC90 406 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1256P-201ENST00000516539 SYMPKQ92797 1274 aaKnown RBP5.37□□□□□ -1.55
RNU6-1256P-201ENST00000516539 FKBPLQ9UIM3 349 aa5.37□□□□□ -1.55
RNU6-1256P-201ENST00000516539 VPS9D1Q9Y2B5 631 aa5.37□□□□□ -1.55
RNU6-1256P-201ENST00000516539 USP17L3A6NCW0 530 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 USP17L4A6NCW7 530 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 FAM196BA6NMK8 535 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 E9PSI1 815 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 POTEB2H3BUK9 544 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 FBXO45P0C2W1 286 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 MCCD1P59942 119 aaPredicted RBP5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 USP17L2Q6R6M4 530 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 USP17L1Q7RTZ2 530 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 LRCH3Q96II8 777 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 NOVA2Q9UNW9 492 aaKnown RBP5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 SALL2Q9Y467 1007 aaPredicted RBP5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 ERBB3P21860 1342 aa5.36□□□□□ -1.55
RNU6-1256P-201ENST00000516539 USP17L5A8MUK1 530 aa5.35□□□□□ -1.55
RNU6-1256P-201ENST00000516539 PTPRNQ16849 979 aa5.35□□□□□ -1.55
RNU6-1256P-201ENST00000516539 CDCA8Q53HL2 280 aa5.35□□□□□ -1.55
RNU6-1256P-201ENST00000516539 ARMC2Q8NEN0 867 aa5.35□□□□□ -1.55
RNU6-1256P-201ENST00000516539 GPKOWQ92917 476 aaPredicted RBP eCLIP5.35□□□□□ -1.55
RNU6-1256P-201ENST00000516539 ZFRQ96KR1 1074 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms