RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 EXOSC9Q06265 439 aaKnown RBP15.14■□□□□ 0.01
PRDM16-207ENST00000512462 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
PRDM16-207ENST00000512462 ARAP3Q8WWN8 1544 aa15.14■□□□□ 0.01
PRDM16-207ENST00000512462 BCORL1Q5H9F3 1711 aa15.14■□□□□ 0.01
PRDM16-207ENST00000512462 C1orf115Q9H7X2 142 aa15.13■□□□□ 0.01
PRDM16-207ENST00000512462 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
PRDM16-207ENST00000512462 AMPHP49418 695 aa15.13■□□□□ 0.01
PRDM16-207ENST00000512462 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
PRDM16-207ENST00000512462 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-207ENST00000512462 COG3Q96JB2 828 aa15.12■□□□□ 0.01
PRDM16-207ENST00000512462 PLA2R1Q13018 1463 aa15.12■□□□□ 0.01
PRDM16-207ENST00000512462 WDR7Q9Y4E6 1490 aa15.12■□□□□ 0.01
PRDM16-207ENST00000512462 DHX29Q7Z478 1369 aaKnown RBP15.12■□□□□ 0.01
PRDM16-207ENST00000512462 PRKAR2BP31323 418 aa15.12■□□□□ 0.01
PRDM16-207ENST00000512462 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
PRDM16-207ENST00000512462 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
PRDM16-207ENST00000512462 LNPKQ9C0E8 428 aa15.11■□□□□ 0.01
PRDM16-207ENST00000512462 NSD3Q9BZ95 1437 aa15.11■□□□□ 0.01
PRDM16-207ENST00000512462 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
PRDM16-207ENST00000512462 FANCAO15360 1455 aa15.11■□□□□ 0.01
PRDM16-207ENST00000512462 HDGFP51858 240 aaKnown RBP15.1■□□□□ 0.01
PRDM16-207ENST00000512462 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
PRDM16-207ENST00000512462 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
PRDM16-207ENST00000512462 IPO8O15397 1037 aaKnown RBP15.1■□□□□ 0.01
PRDM16-207ENST00000512462 ANKRD45Q5TZF3 282 aa15.1■□□□□ 0.01
PRDM16-207ENST00000512462 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
PRDM16-207ENST00000512462 PNNQ9H307 717 aaKnown RBP15.09■□□□□ 0.01
PRDM16-207ENST00000512462 NOS1P29475 1434 aa15.09■□□□□ 0.01
PRDM16-207ENST00000512462 CEBPAP49715 358 aaPredicted RBP15.09■□□□□ 0.01
PRDM16-207ENST00000512462 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0.01
PRDM16-207ENST00000512462 PER1O15534 1290 aaPredicted RBP15.08■□□□□ 0
PRDM16-207ENST00000512462 WWC1Q8IX03 1113 aa15.08■□□□□ 0
PRDM16-207ENST00000512462 TNNQ9UQP3 1299 aa15.08■□□□□ 0
PRDM16-207ENST00000512462 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
PRDM16-207ENST00000512462 PRAG1Q86YV5 1406 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 ZFYVE16Q7Z3T8 1539 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 RTEL1-TNFRSF6BF6WH68 1400 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 DCTN1Q14203 1278 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 EID1Q9Y6B2 187 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 ABCA9Q8IUA7 1624 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 MS4A1P11836 297 aa15.07■□□□□ 0
PRDM16-207ENST00000512462 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
PRDM16-207ENST00000512462 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
PRDM16-207ENST00000512462 ATP10AO60312 1499 aa15.06■□□□□ 0
PRDM16-207ENST00000512462 ZNF330Q9Y3S2 320 aaPredicted RBP15.06■□□□□ 0
PRDM16-207ENST00000512462 DUSP27Q5VZP5 1158 aa15.05■□□□□ 0
PRDM16-207ENST00000512462 CARD14Q9BXL6 1004 aa15.05■□□□□ 0
PRDM16-207ENST00000512462 SLFN5Q08AF3 891 aa15.05■□□□□ -0
PRDM16-207ENST00000512462 TRPM1Q7Z4N2 1603 aa15.05■□□□□ -0
PRDM16-207ENST00000512462 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
PRDM16-207ENST00000512462 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
PRDM16-207ENST00000512462 A2MP01023 1474 aa15.04■□□□□ -0
PRDM16-207ENST00000512462 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
PRDM16-207ENST00000512462 HSCBQ8IWL3 235 aa15.03■□□□□ -0
PRDM16-207ENST00000512462 BACH2Q9BYV9 841 aa15.03■□□□□ -0
PRDM16-207ENST00000512462 EIF2S2P20042 333 aaKnown RBP15.03■□□□□ -0
PRDM16-207ENST00000512462 NCKAP5LQ9HCH0 1330 aa15.03■□□□□ -0
PRDM16-207ENST00000512462 ASXL2Q76L83 1435 aa15.02■□□□□ -0
PRDM16-207ENST00000512462 EMILIN1Q9Y6C2 1016 aa15.02■□□□□ -0
PRDM16-207ENST00000512462 MIS18AQ9NYP9 233 aa15.02□□□□□ -0.01
PRDM16-207ENST00000512462 INO80Q9ULG1 1556 aaPredicted RBP15.02□□□□□ -0.01
PRDM16-207ENST00000512462 NME9Q86XW9 330 aa15.01□□□□□ -0.01
PRDM16-207ENST00000512462 FOXD4L6Q3SYB3 417 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-207ENST00000512462 FOXD4L3Q6VB84 417 aaPredicted RBP15.01□□□□□ -0.01
PRDM16-207ENST00000512462 NOB1Q9ULX3 412 aaKnown RBP15.01□□□□□ -0.01
PRDM16-207ENST00000512462 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
PRDM16-207ENST00000512462 ATP7AQ04656 1500 aa15□□□□□ -0.01
PRDM16-207ENST00000512462 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
PRDM16-207ENST00000512462 DEPDC5O75140 1603 aa15□□□□□ -0.01
PRDM16-207ENST00000512462 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
PRDM16-207ENST00000512462 NGEFQ8N5V2 710 aa15□□□□□ -0.01
PRDM16-207ENST00000512462 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
PRDM16-207ENST00000512462 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
PRDM16-207ENST00000512462 STAC3Q96MF2 364 aa15□□□□□ -0.01
PRDM16-207ENST00000512462 E9PCH4 1651 aa14.99□□□□□ -0.01
PRDM16-207ENST00000512462 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
PRDM16-207ENST00000512462 CSB-PGBD3P0DP91 1061 aa14.99□□□□□ -0.01
PRDM16-207ENST00000512462 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
PRDM16-207ENST00000512462 NLRP6P59044 892 aa14.99□□□□□ -0.01
PRDM16-207ENST00000512462 STK31Q9BXU1 1019 aa14.98□□□□□ -0.01
PRDM16-207ENST00000512462 LAMC1P11047 1609 aa14.97□□□□□ -0.01
PRDM16-207ENST00000512462 TRIM6-TRIM34B2RNG4 842 aa14.97□□□□□ -0.01
PRDM16-207ENST00000512462 SLC52A1Q9NWF4 448 aa14.97□□□□□ -0.01
PRDM16-207ENST00000512462 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.01
PRDM16-207ENST00000512462 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.01
PRDM16-207ENST00000512462 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.01
PRDM16-207ENST00000512462 IGHDP01880 384 aa14.96□□□□□ -0.01
PRDM16-207ENST00000512462 SCAF11Q99590 1463 aaKnown RBP14.96□□□□□ -0.02
PRDM16-207ENST00000512462 ANP32BQ92688 251 aaKnown RBP14.95□□□□□ -0.02
PRDM16-207ENST00000512462 TRPM2O94759 1503 aa14.95□□□□□ -0.02
PRDM16-207ENST00000512462 FAM83GA6ND36 823 aa14.95□□□□□ -0.02
PRDM16-207ENST00000512462 PRDM15P57071 1507 aaPredicted RBP14.95□□□□□ -0.02
PRDM16-207ENST00000512462 C14orf93Q9H972 538 aaKnown RBP14.95□□□□□ -0.02
PRDM16-207ENST00000512462 DDX19BQ9UMR2 479 aa14.95□□□□□ -0.02
PRDM16-207ENST00000512462 VWDEQ8N2E2 1590 aa14.95□□□□□ -0.02
PRDM16-207ENST00000512462 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
PRDM16-207ENST00000512462 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
PRDM16-207ENST00000512462 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
PRDM16-207ENST00000512462 TET3O43151 1660 aa14.94□□□□□ -0.02
PRDM16-207ENST00000512462 CASC1Q6TDU7 716 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms