RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
PRDM2-214ENST00000505823 POGKQ9P215 609 aa17.36■□□□□ 0.37
PRDM2-214ENST00000505823 TECPR2O15040 1411 aa17.36■□□□□ 0.37
PRDM2-214ENST00000505823 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
PRDM2-214ENST00000505823 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
PRDM2-214ENST00000505823 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
PRDM2-214ENST00000505823 LAMC1P11047 1609 aa17.35■□□□□ 0.37
PRDM2-214ENST00000505823 SOCS7O14512 581 aa17.34■□□□□ 0.37
PRDM2-214ENST00000505823 SETD1AO15047 1707 aaKnown RBP17.34■□□□□ 0.37
PRDM2-214ENST00000505823 ILDR2Q71H61 639 aa17.34■□□□□ 0.37
PRDM2-214ENST00000505823 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
PRDM2-214ENST00000505823 NRXN1Q9ULB1 1477 aa17.33■□□□□ 0.37
PRDM2-214ENST00000505823 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.36
PRDM2-214ENST00000505823 WAPLQ7Z5K2 1190 aa17.33■□□□□ 0.36
PRDM2-214ENST00000505823 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
PRDM2-214ENST00000505823 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
PRDM2-214ENST00000505823 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
PRDM2-214ENST00000505823 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
PRDM2-214ENST00000505823 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
PRDM2-214ENST00000505823 TRIM26Q12899 539 aaPredicted RBP17.29■□□□□ 0.36
PRDM2-214ENST00000505823 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
PRDM2-214ENST00000505823 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
PRDM2-214ENST00000505823 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
PRDM2-214ENST00000505823 ORAI2Q96SN7 254 aa17.28■□□□□ 0.36
PRDM2-214ENST00000505823 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
PRDM2-214ENST00000505823 NUTM2BA6NNL0 878 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-214ENST00000505823 NUTM2EB1AL46 878 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-214ENST00000505823 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.36
PRDM2-214ENST00000505823 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.35
PRDM2-214ENST00000505823 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
PRDM2-214ENST00000505823 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
PRDM2-214ENST00000505823 PSME1Q06323 249 aa17.25■□□□□ 0.35
PRDM2-214ENST00000505823 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRDM2-214ENST00000505823 SOS2Q07890 1332 aaPredicted RBP17.24■□□□□ 0.35
PRDM2-214ENST00000505823 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
PRDM2-214ENST00000505823 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
PRDM2-214ENST00000505823 FOXO3O43524 673 aa17.23■□□□□ 0.35
PRDM2-214ENST00000505823 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
PRDM2-214ENST00000505823 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
PRDM2-214ENST00000505823 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
PRDM2-214ENST00000505823 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
PRDM2-214ENST00000505823 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
PRDM2-214ENST00000505823 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
PRDM2-214ENST00000505823 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
PRDM2-214ENST00000505823 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
PRDM2-214ENST00000505823 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
PRDM2-214ENST00000505823 ADGRB1O14514 1584 aa17.17■□□□□ 0.34
PRDM2-214ENST00000505823 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
PRDM2-214ENST00000505823 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
PRDM2-214ENST00000505823 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
PRDM2-214ENST00000505823 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
PRDM2-214ENST00000505823 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
PRDM2-214ENST00000505823 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
PRDM2-214ENST00000505823 C8orf37Q96NL8 207 aa17.16■□□□□ 0.34
PRDM2-214ENST00000505823 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
PRDM2-214ENST00000505823 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
PRDM2-214ENST00000505823 POTEAQ6S8J7 498 aa17.15■□□□□ 0.34
PRDM2-214ENST00000505823 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
PRDM2-214ENST00000505823 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
PRDM2-214ENST00000505823 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.33
PRDM2-214ENST00000505823 RXRBP28702 533 aa17.14■□□□□ 0.33
PRDM2-214ENST00000505823 XPCQ01831 940 aaPredicted RBP17.14■□□□□ 0.33
PRDM2-214ENST00000505823 AFF2P51816 1311 aa17.14■□□□□ 0.33
PRDM2-214ENST00000505823 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
PRDM2-214ENST00000505823 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
PRDM2-214ENST00000505823 LRP6O75581 1613 aa17.12■□□□□ 0.33
PRDM2-214ENST00000505823 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
PRDM2-214ENST00000505823 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
PRDM2-214ENST00000505823 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
PRDM2-214ENST00000505823 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
PRDM2-214ENST00000505823 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
PRDM2-214ENST00000505823 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
PRDM2-214ENST00000505823 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
PRDM2-214ENST00000505823 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
PRDM2-214ENST00000505823 PXDNQ92626 1479 aa17.1■□□□□ 0.33
PRDM2-214ENST00000505823 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
PRDM2-214ENST00000505823 NBPF1Q3BBV0 1214 aa17.09■□□□□ 0.33
PRDM2-214ENST00000505823 QTRT2Q9H974 415 aaKnown RBP17.09■□□□□ 0.33
PRDM2-214ENST00000505823 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
PRDM2-214ENST00000505823 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
PRDM2-214ENST00000505823 CDK19Q9BWU1 502 aa17.08■□□□□ 0.32
PRDM2-214ENST00000505823 USP21Q9UK80 565 aa17.08■□□□□ 0.32
PRDM2-214ENST00000505823 ROCK2O75116 1388 aaKnown RBP17.07■□□□□ 0.32
PRDM2-214ENST00000505823 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
PRDM2-214ENST00000505823 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
PRDM2-214ENST00000505823 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
PRDM2-214ENST00000505823 CCDC61Q9Y6R9 512 aa17.07■□□□□ 0.32
PRDM2-214ENST00000505823 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
PRDM2-214ENST00000505823 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
PRDM2-214ENST00000505823 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
PRDM2-214ENST00000505823 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
PRDM2-214ENST00000505823 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
PRDM2-214ENST00000505823 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
PRDM2-214ENST00000505823 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.32
PRDM2-214ENST00000505823 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
PRDM2-214ENST00000505823 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
PRDM2-214ENST00000505823 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
PRDM2-214ENST00000505823 SLC24A1O60721 1099 aa17■□□□□ 0.31
PRDM2-214ENST00000505823 RGPD8O14715 1765 aaPredicted RBP17■□□□□ 0.31
PRDM2-214ENST00000505823 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms