RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 MTMR2Q13614 643 aa10.45□□□□□ -0.74
SSR3-209ENST00000498205 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
SSR3-209ENST00000498205 THAP11Q96EK4 314 aa10.45□□□□□ -0.74
SSR3-209ENST00000498205 ZBTB3Q9H5J0 574 aa10.45□□□□□ -0.74
SSR3-209ENST00000498205 MSS51Q4VC12 460 aa10.44□□□□□ -0.74
SSR3-209ENST00000498205 RETREG3Q86VR2 466 aa10.44□□□□□ -0.74
SSR3-209ENST00000498205 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
SSR3-209ENST00000498205 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
SSR3-209ENST00000498205 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
SSR3-209ENST00000498205 SLC6A16Q9GZN6 736 aa10.42□□□□□ -0.74
SSR3-209ENST00000498205 PCDHGC3Q9UN70 934 aa10.42□□□□□ -0.74
SSR3-209ENST00000498205 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
SSR3-209ENST00000498205 HLA-CQ95604 372 aa10.41□□□□□ -0.74
SSR3-209ENST00000498205 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
SSR3-209ENST00000498205 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
SSR3-209ENST00000498205 ATP1B4Q9UN42 357 aaPredicted RBP10.41□□□□□ -0.74
SSR3-209ENST00000498205 TMEM132AQ24JP5 1023 aa10.4□□□□□ -0.74
SSR3-209ENST00000498205 DESI1Q6ICB0 168 aa10.4□□□□□ -0.74
SSR3-209ENST00000498205 RNF19BQ6ZMZ0 732 aa10.4□□□□□ -0.74
SSR3-209ENST00000498205 TLL1O43897 1013 aa10.39□□□□□ -0.75
SSR3-209ENST00000498205 LILRB3O75022 631 aa10.39□□□□□ -0.75
SSR3-209ENST00000498205 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
SSR3-209ENST00000498205 A0A0G2JS52 829 aa10.38□□□□□ -0.75
SSR3-209ENST00000498205 NUTM2BA6NNL0 878 aaPredicted RBP10.38□□□□□ -0.75
SSR3-209ENST00000498205 NUTM2EB1AL46 878 aaPredicted RBP10.38□□□□□ -0.75
SSR3-209ENST00000498205 HRCP23327 699 aa10.38□□□□□ -0.75
SSR3-209ENST00000498205 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
SSR3-209ENST00000498205 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
SSR3-209ENST00000498205 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
SSR3-209ENST00000498205 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
SSR3-209ENST00000498205 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
SSR3-209ENST00000498205 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
SSR3-209ENST00000498205 MMP16P51512 607 aa10.36□□□□□ -0.75
SSR3-209ENST00000498205 RGS20O76081 388 aa10.35□□□□□ -0.75
SSR3-209ENST00000498205 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
SSR3-209ENST00000498205 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
SSR3-209ENST00000498205 FAM160A2Q8N612 972 aaPredicted RBP10.35□□□□□ -0.75
SSR3-209ENST00000498205 JUNDP17535 347 aa10.34□□□□□ -0.75
SSR3-209ENST00000498205 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
SSR3-209ENST00000498205 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
SSR3-209ENST00000498205 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
SSR3-209ENST00000498205 DXOO77932 396 aaKnown RBP10.33□□□□□ -0.76
SSR3-209ENST00000498205 S1PR4O95977 384 aa10.33□□□□□ -0.76
SSR3-209ENST00000498205 SYMPKQ92797 1274 aaKnown RBP10.33□□□□□ -0.76
SSR3-209ENST00000498205 QPCTQ16769 361 aa10.32□□□□□ -0.76
SSR3-209ENST00000498205 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
SSR3-209ENST00000498205 PTPRNQ16849 979 aa10.31□□□□□ -0.76
SSR3-209ENST00000498205 TMEM259Q4ZIN3 620 aa10.3□□□□□ -0.76
SSR3-209ENST00000498205 CABLES1Q8TDN4 633 aa10.3□□□□□ -0.76
SSR3-209ENST00000498205 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
SSR3-209ENST00000498205 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
SSR3-209ENST00000498205 RFC5P40937 340 aa10.27□□□□□ -0.77
SSR3-209ENST00000498205 RTL5Q5HYW3 569 aaPredicted RBP10.27□□□□□ -0.77
SSR3-209ENST00000498205 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
SSR3-209ENST00000498205 LYPD8Q6UX82 237 aa10.26□□□□□ -0.77
SSR3-209ENST00000498205 TSC1Q92574 1164 aa10.26□□□□□ -0.77
SSR3-209ENST00000498205 NUDT12Q9BQG2 462 aa10.26□□□□□ -0.77
SSR3-209ENST00000498205 FCF1Q9Y324 198 aaKnown RBP10.26□□□□□ -0.77
SSR3-209ENST00000498205 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
SSR3-209ENST00000498205 CCNYL3P0C7X3 344 aa10.25□□□□□ -0.77
SSR3-209ENST00000498205 BANK1Q8NDB2 785 aa10.24□□□□□ -0.77
SSR3-209ENST00000498205 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
SSR3-209ENST00000498205 RPIAP49247 311 aa10.23□□□□□ -0.77
SSR3-209ENST00000498205 EVA1BQ9NVM1 165 aa10.23□□□□□ -0.77
SSR3-209ENST00000498205 APBB1O00213 710 aa10.22□□□□□ -0.77
SSR3-209ENST00000498205 SOCS7O14512 581 aa10.22□□□□□ -0.77
SSR3-209ENST00000498205 PPEF1O14829 653 aaPredicted RBP10.21□□□□□ -0.77
SSR3-209ENST00000498205 AP1G2O75843 785 aa10.21□□□□□ -0.77
SSR3-209ENST00000498205 CCDC24Q8N4L8 307 aa10.21□□□□□ -0.77
SSR3-209ENST00000498205 KCNH2Q12809 1159 aa10.2□□□□□ -0.78
SSR3-209ENST00000498205 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
SSR3-209ENST00000498205 PNMA1Q8ND90 353 aa10.19□□□□□ -0.78
SSR3-209ENST00000498205 ARMC2Q8NEN0 867 aa10.19□□□□□ -0.78
SSR3-209ENST00000498205 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
SSR3-209ENST00000498205 SLC19A1P41440 591 aa10.18□□□□□ -0.78
SSR3-209ENST00000498205 CTDSPL2Q05D32 466 aa10.18□□□□□ -0.78
SSR3-209ENST00000498205 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
SSR3-209ENST00000498205 CTHP32929 405 aa10.16□□□□□ -0.78
SSR3-209ENST00000498205 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
SSR3-209ENST00000498205 PRKD2Q9BZL6 878 aa10.16□□□□□ -0.78
SSR3-209ENST00000498205 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
SSR3-209ENST00000498205 GPKOWQ92917 476 aaPredicted RBP eCLIP10.14□□□□□ -0.793e-8■□□□□ 10.9
SSR3-209ENST00000498205 UNC93B1Q9H1C4 597 aa10.14□□□□□ -0.79
SSR3-209ENST00000498205 PRM3Q9NNZ6 103 aa10.14□□□□□ -0.79
SSR3-209ENST00000498205 ZC3H4Q9UPT8 1303 aaKnown RBP10.13□□□□□ -0.79
SSR3-209ENST00000498205 WNT7BP56706 349 aa10.13□□□□□ -0.79
SSR3-209ENST00000498205 TRIM32Q13049 653 aa10.13□□□□□ -0.79
SSR3-209ENST00000498205 PLA2G2CQ5R387 149 aa10.13□□□□□ -0.79
SSR3-209ENST00000498205 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
SSR3-209ENST00000498205 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
SSR3-209ENST00000498205 FLIIQ13045 1269 aa10.12□□□□□ -0.79
SSR3-209ENST00000498205 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
SSR3-209ENST00000498205 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
SSR3-209ENST00000498205 LRRN4Q8WUT4 740 aa10.1□□□□□ -0.79
SSR3-209ENST00000498205 MAP10Q9P2G4 905 aa10.1□□□□□ -0.79
SSR3-209ENST00000498205 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
SSR3-209ENST00000498205 ZNF697Q5TEC3 545 aa10.08□□□□□ -0.8
SSR3-209ENST00000498205 EMID1Q96A84 441 aaPredicted RBP10.08□□□□□ -0.8
SSR3-209ENST00000498205 FKBPLQ9UIM3 349 aa10.07□□□□□ -0.8
SSR3-209ENST00000498205 NR6A1Q15406 480 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms