RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 BOLA1Q9Y3E2 137 aa2.87□□□□□ -1.95
UBR4-217ENST00000497018 KIF21AQ7Z4S6 1674 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 SSFA2P28290 1259 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 SOX11P35716 441 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 CDCA8Q53HL2 280 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 PADI6Q6TGC4 694 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 TMEM92Q6UXU6 159 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 TBC1D9Q6ZT07 1266 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 CCER1Q8TC90 406 aaPredicted RBP2.86□□□□□ -1.95
UBR4-217ENST00000497018 UBXN4Q92575 508 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 MS4A3Q96HJ5 214 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 L3MBTL3Q96JM7 780 aaPredicted RBP2.86□□□□□ -1.95
UBR4-217ENST00000497018 EPAS1Q99814 870 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 TRIM35Q9UPQ4 493 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 PCDHB15Q9Y5E8 787 aa2.86□□□□□ -1.95
UBR4-217ENST00000497018 PHF14O94880 888 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 PLCG2P16885 1265 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 FAM69CQ0P6D2 419 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 NAALADL2Q58DX5 795 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 IER5LQ5T953 404 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 PRPF38BQ5VTL8 546 aaKnown RBP2.85□□□□□ -1.95
UBR4-217ENST00000497018 CABLES1Q8TDN4 633 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 OCEL1Q9H607 264 aa2.85□□□□□ -1.95
UBR4-217ENST00000497018 RBM27Q9P2N5 1060 aaKnown RBP2.85□□□□□ -1.95
UBR4-217ENST00000497018 MAP3K7O43318 606 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 ATP9BO43861 1147 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 NDUFV2P19404 249 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 SERPINB4P48594 390 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 MARSP56192 900 aaKnown RBP2.84□□□□□ -1.95
UBR4-217ENST00000497018 SF3A1Q15459 793 aaKnown RBP2.84□□□□□ -1.95
UBR4-217ENST00000497018 GIMAP6Q6P9H5 292 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 ANKRD13AQ8IZ07 590 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 PTCD2Q8WV60 388 aaKnown RBP2.84□□□□□ -1.95
UBR4-217ENST00000497018 CLP1Q92989 425 aaKnown RBP2.84□□□□□ -1.95
UBR4-217ENST00000497018 PCDHGA10Q9Y5H3 936 aa2.84□□□□□ -1.95
UBR4-217ENST00000497018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 ANKRD33BA6NCL7 494 aa2.83□□□□□ -1.96
UBR4-217ENST00000497018 BRD2P25440 801 aaKnown RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 ARID4AP29374 1257 aaPredicted RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 TAGLNQ01995 201 aaKnown RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 CSPP1Q1MSJ5 1256 aa2.83□□□□□ -1.96
UBR4-217ENST00000497018 LDLRAD1Q5T700 205 aa2.83□□□□□ -1.96
UBR4-217ENST00000497018 TYW1BQ6NUM6 668 aa2.83□□□□□ -1.96
UBR4-217ENST00000497018 SLAIN1Q8ND83 568 aa2.83□□□□□ -1.96
UBR4-217ENST00000497018 HIRIP3Q9BW71 556 aaPredicted RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 BMP2KQ9NSY1 1161 aaPredicted RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 NOVA2Q9UNW9 492 aaKnown RBP2.83□□□□□ -1.96
UBR4-217ENST00000497018 ADGRL1O94910 1474 aa2.83□□□□□ -1.96
UBR4-217ENST00000497018 NESP48681 1621 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 ANKRD62A6NC57 917 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 C19orf67A6NJJ6 358 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 FAM196BA6NMK8 535 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 PPP1R3GB7ZBB8 358 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 PIK3CDO00329 1044 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 SEC24BO95487 1268 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 NCLP19338 710 aaKnown RBP2.82□□□□□ -1.96
UBR4-217ENST00000497018 CTDSPL2Q05D32 466 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 RAD51AP2Q09MP3 1159 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 MRPL58Q14197 206 aaKnown RBP2.82□□□□□ -1.96
UBR4-217ENST00000497018 ZNF662Q6ZS27 426 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 PLEKHM2Q8IWE5 1019 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 NFATC2IPQ8NCF5 419 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 C1orf216Q8TAB5 229 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 CERKQ8TCT0 537 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 EPS8L1Q8TE68 723 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 LRRN4Q8WUT4 740 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 ZBTB3Q9H5J0 574 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 FAM198AQ9UFP1 575 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 KDM6BO15054 1643 aa2.82□□□□□ -1.96
UBR4-217ENST00000497018 USP17L3A6NCW0 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L4A6NCW7 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 RCCD1A6NED2 376 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L15C9J2P7 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L10C9JJH3 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L13C9JLJ4 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L12C9JPN9 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L11C9JVI0 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L21D6R901 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L18D6R9N7 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L22D6RA61 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L17D6RBQ6 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L19D6RCP7 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L20D6RJB6 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 SLC34A2O95436 690 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 IRX5P78411 483 aaPredicted RBP2.81□□□□□ -1.96
UBR4-217ENST00000497018 HDLBPQ00341 1268 aaKnown RBP2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L24Q0WX57 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 ECM1Q16610 540 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 CRTC2Q53ET0 693 aaPredicted RBP2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L2Q6R6M4 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 C3orf67Q6ZVT6 689 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 DPH6Q7L8W6 267 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 USP17L1Q7RTZ2 530 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 RBM33Q96EV2 1170 aaKnown RBP2.81□□□□□ -1.96
UBR4-217ENST00000497018 TINF2Q9BSI4 451 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 PCDHGC3Q9UN70 934 aa2.81□□□□□ -1.96
UBR4-217ENST00000497018 KIF13AQ9H1H9 1805 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 USP17L5A8MUK1 530 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 HOXA2O43364 376 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 ATP2B4P23634 1241 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms