RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 FAM161AQ3B820 660 aa6.18□□□□□ -1.42
NF1-216ENST00000495910 RNF187Q5TA31 235 aaPredicted RBP6.18□□□□□ -1.42
NF1-216ENST00000495910 RAD21O60216 631 aa6.18□□□□□ -1.42
NF1-216ENST00000495910 NEBLO76041 1014 aa6.18□□□□□ -1.42
NF1-216ENST00000495910 PUS7Q96PZ0 661 aaKnown RBP6.18□□□□□ -1.42
NF1-216ENST00000495910 CPSF2Q9P2I0 782 aaKnown RBP6.18□□□□□ -1.42
NF1-216ENST00000495910 CCDC6Q16204 474 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 HSP90AB4PQ58FF6 505 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 RILPL2Q969X0 211 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 UQCRHLA0A096LP55 91 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 UQCRHP07919 91 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 DESP17661 470 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 ANO2Q9NQ90 1003 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 TMF1P82094 1093 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 SPAG9O60271 1321 aaKnown RBP6.17□□□□□ -1.42
NF1-216ENST00000495910 ERICH2A1L162 156 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 JAKMIP3Q5VZ66 844 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 SMC3Q9UQE7 1217 aa6.17□□□□□ -1.42
NF1-216ENST00000495910 LUZP1Q86V48 1076 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 GTPBP4Q9BZE4 634 aaKnown RBP6.16□□□□□ -1.42
NF1-216ENST00000495910 PDCL3Q9H2J4 239 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 SMC4Q9NTJ3 1288 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
NF1-216ENST00000495910 CCDC160A6NGH7 325 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 TDO2P48775 406 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 DZIP1Q86YF9 867 aaKnown RBP6.16□□□□□ -1.42
NF1-216ENST00000495910 CRACR2AQ9BSW2 395 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 KIF7Q2M1P5 1343 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 VPS37CA5D8V6 355 aaPredicted RBP6.16□□□□□ -1.42
NF1-216ENST00000495910 REC8O95072 547 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 TMEM132AQ24JP5 1023 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 DNAAF4Q8WXU2 420 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 TSPY26PQ9H489 355 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 GCOM1H8Y6P7 765 aaPredicted RBP6.16□□□□□ -1.42
NF1-216ENST00000495910 MYZAPP0CAP1 466 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 NFXL1Q6ZNB6 911 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 TRDNQ13061 729 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 PPFIBP1Q86W92 1011 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 TCHPQ9BT92 498 aa6.16□□□□□ -1.42
NF1-216ENST00000495910 MNAT1P51948 309 aa6.15□□□□□ -1.42
NF1-216ENST00000495910 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.42
NF1-216ENST00000495910 SDF4Q9BRK5 362 aa6.15□□□□□ -1.42
NF1-216ENST00000495910 CGNQ9P2M7 1197 aaKnown RBP6.15□□□□□ -1.42
NF1-216ENST00000495910 EIF3AQ14152 1382 aaKnown RBP6.15□□□□□ -1.42
NF1-216ENST00000495910 FERP16591 822 aa6.15□□□□□ -1.42
NF1-216ENST00000495910 SPECC1LQ69YQ0 1117 aa6.15□□□□□ -1.42
NF1-216ENST00000495910 SEPT14Q6ZU15 432 aa6.15□□□□□ -1.42
NF1-216ENST00000495910 MCM3P25205 808 aa6.15□□□□□ -1.43
NF1-216ENST00000495910 MAP9Q49MG5 647 aa6.15□□□□□ -1.43
NF1-216ENST00000495910 LRRFIP2Q9Y608 721 aaKnown RBP6.15□□□□□ -1.43
NF1-216ENST00000495910 SLC4A3P48751 1232 aa6.15□□□□□ -1.43
NF1-216ENST00000495910 MIPOL1Q8TD10 442 aa6.15□□□□□ -1.43
NF1-216ENST00000495910 CEP83Q9Y592 693 aa6.15□□□□□ -1.43
NF1-216ENST00000495910 TAF4BQ92750 862 aa6.15□□□□□ -1.43
NF1-216ENST00000495910 SARNPP82979 210 aaKnown RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 ZMAT2Q96NC0 199 aaKnown RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 XBP1P17861 261 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 SLC4A10Q6U841 1118 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 UBE4AQ14139 1066 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 CCDC148Q8NFR7 591 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 RBM28Q9NW13 759 aaKnown RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 RPUSD2Q8IZ73 545 aaKnown RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 ZFYP08048 801 aaPredicted RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 CENPQQ7L2Z9 268 aaPredicted RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 BBXQ8WY36 941 aaPredicted RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 CCDC113Q9H0I3 377 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 EPB41L2O43491 1005 aaKnown RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 PDE4AP27815 886 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 BRPF1P55201 1214 aaPredicted RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 CEP120Q8N960 986 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 DACH1Q9UI36 760 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 CCDC9Q9Y3X0 531 aaKnown RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 CBFA2T2O43439 604 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 SEPT8Q92599 483 aa6.14□□□□□ -1.43
NF1-216ENST00000495910 CENPJQ9HC77 1338 aaPredicted RBP6.14□□□□□ -1.43
NF1-216ENST00000495910 FBF1Q8TES7 1133 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 KTN1Q86UP2 1357 aaKnown RBP6.13□□□□□ -1.43
NF1-216ENST00000495910 E9PSI1 815 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 GTF2E1P29083 439 aaPredicted RBP6.13□□□□□ -1.43
NF1-216ENST00000495910 ERC1Q8IUD2 1116 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 EEA1Q15075 1411 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 ANAPC15P60006 121 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 CETN2P41208 172 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 RNF168Q8IYW5 571 aaPredicted RBP6.13□□□□□ -1.43
NF1-216ENST00000495910 CDK5RAP3Q96JB5 506 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 DYNC1I1O14576 645 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 MBD3O95983 291 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 SERPINC1P01008 464 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 CCDC174Q6PII3 467 aa6.13□□□□□ -1.43
NF1-216ENST00000495910 SOX12O15370 315 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 RNF214Q8ND24 703 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 UBXN4Q92575 508 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 MTUS2Q5JR59 1369 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 KINO60870 393 aaKnown RBP6.12□□□□□ -1.43
NF1-216ENST00000495910 RFC1P35251 1148 aaPredicted RBP6.12□□□□□ -1.43
NF1-216ENST00000495910 RRP7BPQ9NSQ0 103 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 CSB-PGBD3P0DP91 1061 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 IFFO1Q0D2I5 559 aa6.12□□□□□ -1.43
NF1-216ENST00000495910 FANCIQ9NVI1 1328 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms