RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 APLP1P51693 650 aa7.08□□□□□ -1.28
AC055855.1-201ENST00000489563 MTMR2Q13614 643 aa7.08□□□□□ -1.28
AC055855.1-201ENST00000489563 MORN1Q5T089 497 aa7.08□□□□□ -1.28
AC055855.1-201ENST00000489563 FBXO31Q5XUX0 539 aaPredicted RBP7.08□□□□□ -1.28
AC055855.1-201ENST00000489563 PCDHB3Q9Y5E6 796 aa7.08□□□□□ -1.28
AC055855.1-201ENST00000489563 AP1G2O75843 785 aa7.07□□□□□ -1.28
AC055855.1-201ENST00000489563 BANK1Q8NDB2 785 aa7.07□□□□□ -1.28
AC055855.1-201ENST00000489563 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
AC055855.1-201ENST00000489563 SPDYE5A6NIY4 337 aa7.06□□□□□ -1.28
AC055855.1-201ENST00000489563 PTPN5P54829 565 aa7.06□□□□□ -1.28
AC055855.1-201ENST00000489563 Q3C1V9 767 aa7.06□□□□□ -1.28
AC055855.1-201ENST00000489563 TSC1Q92574 1164 aa7.06□□□□□ -1.28
AC055855.1-201ENST00000489563 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
AC055855.1-201ENST00000489563 ZMYND15Q9H091 742 aa7.06□□□□□ -1.28
AC055855.1-201ENST00000489563 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
AC055855.1-201ENST00000489563 MCM6Q14566 821 aa7.05□□□□□ -1.28
AC055855.1-201ENST00000489563 NR1I2O75469 434 aa7.04□□□□□ -1.28
AC055855.1-201ENST00000489563 SCUBE3Q8IX30 993 aa7.04□□□□□ -1.28
AC055855.1-201ENST00000489563 SNRKQ9NRH2 765 aa7.04□□□□□ -1.28
AC055855.1-201ENST00000489563 MYT1LQ9UL68 1186 aa7.04□□□□□ -1.28
AC055855.1-201ENST00000489563 BLOC1S3Q6QNY0 202 aa7.03□□□□□ -1.28
AC055855.1-201ENST00000489563 NYAP1Q6ZVC0 841 aa7.03□□□□□ -1.28
AC055855.1-201ENST00000489563 HELBQ8NG08 1087 aaPredicted RBP7.03□□□□□ -1.28
AC055855.1-201ENST00000489563 RAD21O60216 631 aa7.02□□□□□ -1.29
AC055855.1-201ENST00000489563 FMNL1O95466 1100 aaPredicted RBP7.02□□□□□ -1.29
AC055855.1-201ENST00000489563 COPS2P61201 443 aa7.02□□□□□ -1.29
AC055855.1-201ENST00000489563 CTDSPL2Q05D32 466 aa7.02□□□□□ -1.29
AC055855.1-201ENST00000489563 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
AC055855.1-201ENST00000489563 PRR7Q8TB68 274 aa7.02□□□□□ -1.29
AC055855.1-201ENST00000489563 CFAP99D6REC4 459 aa7.01□□□□□ -1.29
AC055855.1-201ENST00000489563 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
AC055855.1-201ENST00000489563 RNF19BQ6ZMZ0 732 aa7.01□□□□□ -1.29
AC055855.1-201ENST00000489563 USB1Q9BQ65 265 aaKnown RBP7.01□□□□□ -1.29
AC055855.1-201ENST00000489563 SALL2Q9Y467 1007 aaPredicted RBP7.01□□□□□ -1.29
AC055855.1-201ENST00000489563 APBB1O00213 710 aa7□□□□□ -1.29
AC055855.1-201ENST00000489563 BRICD5Q6PL45 260 aa7□□□□□ -1.29
AC055855.1-201ENST00000489563 CLUAP1Q96AJ1 413 aa7□□□□□ -1.29
AC055855.1-201ENST00000489563 SUPT5HO00267 1087 aaKnown RBP6.99□□□□□ -1.29
AC055855.1-201ENST00000489563 PRM3Q9NNZ6 103 aa6.99□□□□□ -1.29
AC055855.1-201ENST00000489563 MTMR14Q8NCE2 650 aa6.98□□□□□ -1.29
AC055855.1-201ENST00000489563 THAP11Q96EK4 314 aa6.98□□□□□ -1.29
AC055855.1-201ENST00000489563 SPSB2Q99619 263 aa6.98□□□□□ -1.29
AC055855.1-201ENST00000489563 A6NJR5 290 aa6.97□□□□□ -1.29
AC055855.1-201ENST00000489563 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
AC055855.1-201ENST00000489563 LRRN4Q8WUT4 740 aa6.97□□□□□ -1.29
AC055855.1-201ENST00000489563 POM121Q96HA1 1249 aa6.97□□□□□ -1.29
AC055855.1-201ENST00000489563 MTRQ99707 1265 aa6.97□□□□□ -1.29
AC055855.1-201ENST00000489563 ZPR1O75312 459 aa6.96□□□□□ -1.3
AC055855.1-201ENST00000489563 RNF166Q96A37 237 aaPredicted RBP6.96□□□□□ -1.3
AC055855.1-201ENST00000489563 IL21Q9HBE4 155 aa6.96□□□□□ -1.3
AC055855.1-201ENST00000489563 SOCS7O14512 581 aa6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 PER1O15534 1290 aaPredicted RBP6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 SPNS2Q8IVW8 549 aa6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 GDPD2Q9HCC8 539 aa6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 HMX1Q9NP08 348 aaPredicted RBP6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 HCSTQ9UBK5 93 aa6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 COG6Q9Y2V7 657 aa6.95□□□□□ -1.3
AC055855.1-201ENST00000489563 JUNDP17535 347 aa6.94□□□□□ -1.3
AC055855.1-201ENST00000489563 TJAP1Q5JTD0 557 aa6.94□□□□□ -1.3
AC055855.1-201ENST00000489563 LYPD8Q6UX82 237 aa6.94□□□□□ -1.3
AC055855.1-201ENST00000489563 PROSER2Q86WR7 435 aaPredicted RBP6.94□□□□□ -1.3
AC055855.1-201ENST00000489563 ZNF516Q92618 1163 aa6.94□□□□□ -1.3
AC055855.1-201ENST00000489563 TLL1O43897 1013 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 TRAK2O60296 914 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 ADH1BP00325 375 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 ABL2P42684 1182 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 MSS51Q4VC12 460 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 FAM160A2Q8N612 972 aaPredicted RBP6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 TBC1D2BQ9UPU7 963 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 NDUFB9Q9Y6M9 179 aa6.93□□□□□ -1.3
AC055855.1-201ENST00000489563 NR6A1Q15406 480 aa6.92□□□□□ -1.3
AC055855.1-201ENST00000489563 GJD4Q96KN9 370 aaPredicted RBP6.92□□□□□ -1.3
AC055855.1-201ENST00000489563 CTHP32929 405 aa6.91□□□□□ -1.3
AC055855.1-201ENST00000489563 PTPRNQ16849 979 aa6.91□□□□□ -1.3
AC055855.1-201ENST00000489563 EPS8L1Q8TE68 723 aa6.91□□□□□ -1.3
AC055855.1-201ENST00000489563 TRIM34Q9BYJ4 488 aa6.91□□□□□ -1.3
AC055855.1-201ENST00000489563 PRDM9Q9NQV7 894 aa6.91□□□□□ -1.3
AC055855.1-201ENST00000489563 ZNF330Q9Y3S2 320 aaPredicted RBP6.91□□□□□ -1.3
AC055855.1-201ENST00000489563 DXOO77932 396 aaKnown RBP6.9□□□□□ -1.3
AC055855.1-201ENST00000489563 PNMA1Q8ND90 353 aa6.9□□□□□ -1.3
AC055855.1-201ENST00000489563 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
AC055855.1-201ENST00000489563 SLC6A16Q9GZN6 736 aa6.9□□□□□ -1.3
AC055855.1-201ENST00000489563 ARID3CA6NKF2 412 aa6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 MMP16P51512 607 aa6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 KCNC4Q03721 635 aa6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 CCDC24Q8N4L8 307 aa6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 NKX2-3Q8TAU0 364 aa6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 ZNF777Q9ULD5 760 aaPredicted RBP6.89□□□□□ -1.31
AC055855.1-201ENST00000489563 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
AC055855.1-201ENST00000489563 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
AC055855.1-201ENST00000489563 S1PR4O95977 384 aa6.86□□□□□ -1.31
AC055855.1-201ENST00000489563 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
AC055855.1-201ENST00000489563 KCNH2Q12809 1159 aa6.86□□□□□ -1.31
AC055855.1-201ENST00000489563 WASHC4Q2M389 1173 aa6.86□□□□□ -1.31
AC055855.1-201ENST00000489563 MMRN1Q13201 1228 aa6.85□□□□□ -1.31
AC055855.1-201ENST00000489563 IRF5Q13568 498 aa6.85□□□□□ -1.31
AC055855.1-201ENST00000489563 FKBPLQ9UIM3 349 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms