RNA–Protein interactions for RNA: ENST00000489178.1

ALCAM-208, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 2

Gene ALCAM, Length 783 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-208ENST00000489178 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
ALCAM-208ENST00000489178 SKIV2LQ15477 1246 aaKnown RBP11.68□□□□□ -0.54
ALCAM-208ENST00000489178 SPSB2Q99619 263 aa11.68□□□□□ -0.54
ALCAM-208ENST00000489178 LIMD1Q9UGP4 676 aa11.68□□□□□ -0.54
ALCAM-208ENST00000489178 A0A0G2JS52 829 aa11.67□□□□□ -0.54
ALCAM-208ENST00000489178 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
ALCAM-208ENST00000489178 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
ALCAM-208ENST00000489178 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
ALCAM-208ENST00000489178 MSS51Q4VC12 460 aa11.65□□□□□ -0.54
ALCAM-208ENST00000489178 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
ALCAM-208ENST00000489178 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
ALCAM-208ENST00000489178 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
ALCAM-208ENST00000489178 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
ALCAM-208ENST00000489178 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
ALCAM-208ENST00000489178 USB1Q9BQ65 265 aaKnown RBP11.63□□□□□ -0.55
ALCAM-208ENST00000489178 LILRB3O75022 631 aa11.62□□□□□ -0.55
ALCAM-208ENST00000489178 RETREG3Q86VR2 466 aa11.62□□□□□ -0.55
ALCAM-208ENST00000489178 POLR3EQ9NVU0 708 aa11.62□□□□□ -0.55
ALCAM-208ENST00000489178 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
ALCAM-208ENST00000489178 HRCP23327 699 aa11.61□□□□□ -0.55
ALCAM-208ENST00000489178 SLC6A16Q9GZN6 736 aa11.61□□□□□ -0.55
ALCAM-208ENST00000489178 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
ALCAM-208ENST00000489178 MMP16P51512 607 aa11.6□□□□□ -0.55
ALCAM-208ENST00000489178 MTMR2Q13614 643 aa11.6□□□□□ -0.55
ALCAM-208ENST00000489178 PROCA1Q8NCQ7 364 aaPredicted RBP11.6□□□□□ -0.55
ALCAM-208ENST00000489178 S1PR4O95977 384 aa11.59□□□□□ -0.55
ALCAM-208ENST00000489178 QPCTQ16769 361 aa11.59□□□□□ -0.55
ALCAM-208ENST00000489178 ZBTB3Q9H5J0 574 aa11.59□□□□□ -0.55
ALCAM-208ENST00000489178 C6orf229H3BNL8 230 aa11.58□□□□□ -0.56
ALCAM-208ENST00000489178 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
ALCAM-208ENST00000489178 RNF223E7ERA6 249 aa11.57□□□□□ -0.56
ALCAM-208ENST00000489178 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
ALCAM-208ENST00000489178 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
ALCAM-208ENST00000489178 GGCXP38435 758 aa11.56□□□□□ -0.56
ALCAM-208ENST00000489178 DESI1Q6ICB0 168 aa11.56□□□□□ -0.56
ALCAM-208ENST00000489178 CABLES1Q8TDN4 633 aa11.56□□□□□ -0.56
ALCAM-208ENST00000489178 PRDM9Q9NQV7 894 aa11.56□□□□□ -0.56
ALCAM-208ENST00000489178 ANKLE1Q8NAG6 615 aa11.55□□□□□ -0.56
ALCAM-208ENST00000489178 CSPP1Q1MSJ5 1256 aa11.54□□□□□ -0.56
ALCAM-208ENST00000489178 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
ALCAM-208ENST00000489178 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
ALCAM-208ENST00000489178 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
ALCAM-208ENST00000489178 RGS20O76081 388 aa11.53□□□□□ -0.56
ALCAM-208ENST00000489178 JUNDP17535 347 aa11.53□□□□□ -0.56
ALCAM-208ENST00000489178 PPEF1O14829 653 aaPredicted RBP11.52□□□□□ -0.57
ALCAM-208ENST00000489178 PCMTD1Q96MG8 357 aaPredicted RBP11.52□□□□□ -0.57
ALCAM-208ENST00000489178 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
ALCAM-208ENST00000489178 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
ALCAM-208ENST00000489178 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
ALCAM-208ENST00000489178 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
ALCAM-208ENST00000489178 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
ALCAM-208ENST00000489178 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
ALCAM-208ENST00000489178 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
ALCAM-208ENST00000489178 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
ALCAM-208ENST00000489178 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
ALCAM-208ENST00000489178 PTPRNQ16849 979 aa11.46□□□□□ -0.57
ALCAM-208ENST00000489178 RFC5P40937 340 aa11.44□□□□□ -0.58
ALCAM-208ENST00000489178 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
ALCAM-208ENST00000489178 LIAT1Q6ZQX7 453 aa11.43□□□□□ -0.58
ALCAM-208ENST00000489178 NUDT12Q9BQG2 462 aa11.43□□□□□ -0.58
ALCAM-208ENST00000489178 EVA1BQ9NVM1 165 aa11.43□□□□□ -0.58
ALCAM-208ENST00000489178 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
ALCAM-208ENST00000489178 F12P00748 615 aaPredicted RBP11.41□□□□□ -0.58
ALCAM-208ENST00000489178 CCNYL3P0C7X3 344 aa11.41□□□□□ -0.58
ALCAM-208ENST00000489178 CTDSPL2Q05D32 466 aa11.41□□□□□ -0.58
ALCAM-208ENST00000489178 RPIAP49247 311 aa11.4□□□□□ -0.58
ALCAM-208ENST00000489178 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
ALCAM-208ENST00000489178 PRKD2Q9BZL6 878 aa11.4□□□□□ -0.58
ALCAM-208ENST00000489178 SLC19A1P41440 591 aa11.39□□□□□ -0.59
ALCAM-208ENST00000489178 TMEM259Q4ZIN3 620 aa11.39□□□□□ -0.59
ALCAM-208ENST00000489178 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
ALCAM-208ENST00000489178 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
ALCAM-208ENST00000489178 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
ALCAM-208ENST00000489178 SPRYD7Q5W111 196 aa11.37□□□□□ -0.59
ALCAM-208ENST00000489178 ATP1B4Q9UN42 357 aaPredicted RBP11.37□□□□□ -0.59
ALCAM-208ENST00000489178 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
ALCAM-208ENST00000489178 BANK1Q8NDB2 785 aa11.35□□□□□ -0.59
ALCAM-208ENST00000489178 TSC1Q92574 1164 aa11.35□□□□□ -0.59
ALCAM-208ENST00000489178 AP1G2O75843 785 aa11.34□□□□□ -0.59
ALCAM-208ENST00000489178 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
ALCAM-208ENST00000489178 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
ALCAM-208ENST00000489178 SOCS7O14512 581 aa11.32□□□□□ -0.6
ALCAM-208ENST00000489178 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
ALCAM-208ENST00000489178 TRIM32Q13049 653 aa11.32□□□□□ -0.6
ALCAM-208ENST00000489178 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
ALCAM-208ENST00000489178 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
ALCAM-208ENST00000489178 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
ALCAM-208ENST00000489178 CD2BP2O95400 341 aaKnown RBP11.31□□□□□ -0.6
ALCAM-208ENST00000489178 HMX1Q9NP08 348 aaPredicted RBP11.29□□□□□ -0.6
ALCAM-208ENST00000489178 CTHP32929 405 aa11.28□□□□□ -0.6
ALCAM-208ENST00000489178 WNT7BP56706 349 aa11.27□□□□□ -0.61
ALCAM-208ENST00000489178 SKOR1P84550 965 aa11.27□□□□□ -0.61
ALCAM-208ENST00000489178 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.61
ALCAM-208ENST00000489178 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
ALCAM-208ENST00000489178 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
ALCAM-208ENST00000489178 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
ALCAM-208ENST00000489178 TIMELESSQ9UNS1 1208 aa11.27□□□□□ -0.61
ALCAM-208ENST00000489178 GDF9O60383 454 aa11.26□□□□□ -0.61
ALCAM-208ENST00000489178 NR6A1Q15406 480 aa11.25□□□□□ -0.61
ALCAM-208ENST00000489178 EPS8L1Q8TE68 723 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms