RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
NELFE-209ENST00000488426 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
NELFE-209ENST00000488426 ATF3P18847 181 aa17.69■□□□□ 0.42
NELFE-209ENST00000488426 KIF7Q2M1P5 1343 aa17.69■□□□□ 0.42
NELFE-209ENST00000488426 ROBO2Q9HCK4 1378 aa17.69■□□□□ 0.42
NELFE-209ENST00000488426 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
NELFE-209ENST00000488426 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
NELFE-209ENST00000488426 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
NELFE-209ENST00000488426 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
NELFE-209ENST00000488426 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
NELFE-209ENST00000488426 STK26Q9P289 416 aa17.65■□□□□ 0.42
NELFE-209ENST00000488426 DDX17Q92841 729 aaKnown RBP17.64■□□□□ 0.41
NELFE-209ENST00000488426 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
NELFE-209ENST00000488426 EIF3AQ14152 1382 aaKnown RBP17.63■□□□□ 0.41
NELFE-209ENST00000488426 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
NELFE-209ENST00000488426 MST1RQ04912 1400 aa17.62■□□□□ 0.41
NELFE-209ENST00000488426 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
NELFE-209ENST00000488426 ADGRL3Q9HAR2 1447 aa17.61■□□□□ 0.41
NELFE-209ENST00000488426 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
NELFE-209ENST00000488426 ASXL1Q8IXJ9 1541 aa17.61■□□□□ 0.41
NELFE-209ENST00000488426 PHLPP1O60346 1717 aa17.61■□□□□ 0.41
NELFE-209ENST00000488426 ANP32CO43423 234 aa17.61■□□□□ 0.41
NELFE-209ENST00000488426 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
NELFE-209ENST00000488426 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
NELFE-209ENST00000488426 TESK2Q96S53 571 aa17.6■□□□□ 0.41
NELFE-209ENST00000488426 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
NELFE-209ENST00000488426 PLEKHH1Q9ULM0 1364 aa17.59■□□□□ 0.41
NELFE-209ENST00000488426 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
NELFE-209ENST00000488426 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.41
NELFE-209ENST00000488426 DCCP43146 1447 aa17.58■□□□□ 0.41
NELFE-209ENST00000488426 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
NELFE-209ENST00000488426 SOCS7O14512 581 aa17.56■□□□□ 0.4
NELFE-209ENST00000488426 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
NELFE-209ENST00000488426 TMF1P82094 1093 aa17.56■□□□□ 0.4
NELFE-209ENST00000488426 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
NELFE-209ENST00000488426 JCADQ9P266 1359 aa17.55■□□□□ 0.4
NELFE-209ENST00000488426 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
NELFE-209ENST00000488426 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
NELFE-209ENST00000488426 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
NELFE-209ENST00000488426 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
NELFE-209ENST00000488426 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
NELFE-209ENST00000488426 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
NELFE-209ENST00000488426 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
NELFE-209ENST00000488426 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
NELFE-209ENST00000488426 TECPR2O15040 1411 aa17.52■□□□□ 0.4
NELFE-209ENST00000488426 POTEAQ6S8J7 498 aa17.52■□□□□ 0.39
NELFE-209ENST00000488426 LRP6O75581 1613 aa17.51■□□□□ 0.39
NELFE-209ENST00000488426 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
NELFE-209ENST00000488426 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
NELFE-209ENST00000488426 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
NELFE-209ENST00000488426 QRICH2Q9H0J4 1663 aa17.5■□□□□ 0.39
NELFE-209ENST00000488426 NUTM2BA6NNL0 878 aaPredicted RBP17.48■□□□□ 0.39
NELFE-209ENST00000488426 NUTM2EB1AL46 878 aaPredicted RBP17.48■□□□□ 0.39
NELFE-209ENST00000488426 NUTM2AQ8IVF1 878 aaPredicted RBP17.48■□□□□ 0.39
NELFE-209ENST00000488426 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
NELFE-209ENST00000488426 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
NELFE-209ENST00000488426 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
NELFE-209ENST00000488426 PRAM1Q96QH2 718 aa17.47■□□□□ 0.39
NELFE-209ENST00000488426 TRAK1Q9UPV9 953 aa17.46■□□□□ 0.39
NELFE-209ENST00000488426 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.38
NELFE-209ENST00000488426 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.38
NELFE-209ENST00000488426 SIRT1Q96EB6 747 aa17.45■□□□□ 0.38
NELFE-209ENST00000488426 KNDC1Q76NI1 1749 aa17.45■□□□□ 0.38
NELFE-209ENST00000488426 SPATA31A6Q5VVP1 1343 aa17.44■□□□□ 0.38
NELFE-209ENST00000488426 FOXO3O43524 673 aa17.44■□□□□ 0.38
NELFE-209ENST00000488426 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
NELFE-209ENST00000488426 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
NELFE-209ENST00000488426 CDC42BPGQ6DT37 1551 aa17.43■□□□□ 0.38
NELFE-209ENST00000488426 MYOM1P52179 1685 aa17.43■□□□□ 0.38
NELFE-209ENST00000488426 SHPRHQ149N8 1683 aa17.43■□□□□ 0.38
NELFE-209ENST00000488426 PNPLA6Q8IY17 1366 aa17.42■□□□□ 0.38
NELFE-209ENST00000488426 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
NELFE-209ENST00000488426 DLC1Q96QB1 1528 aa17.41■□□□□ 0.38
NELFE-209ENST00000488426 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
NELFE-209ENST00000488426 MEX3CQ5U5Q3 659 aaKnown RBP17.41■□□□□ 0.38
NELFE-209ENST00000488426 POGKQ9P215 609 aa17.4■□□□□ 0.38
NELFE-209ENST00000488426 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.38
NELFE-209ENST00000488426 RGPD8O14715 1765 aaPredicted RBP17.38■□□□□ 0.37
NELFE-209ENST00000488426 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
NELFE-209ENST00000488426 FMN2Q9NZ56 1722 aa17.37■□□□□ 0.37
NELFE-209ENST00000488426 ADAMTS2O95450 1211 aa17.37■□□□□ 0.37
NELFE-209ENST00000488426 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
NELFE-209ENST00000488426 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
NELFE-209ENST00000488426 PXDNQ92626 1479 aa17.36■□□□□ 0.37
NELFE-209ENST00000488426 PANK3Q9H999 370 aa17.35■□□□□ 0.37
NELFE-209ENST00000488426 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
NELFE-209ENST00000488426 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
NELFE-209ENST00000488426 C8orf37Q96NL8 207 aa17.35■□□□□ 0.37
NELFE-209ENST00000488426 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
NELFE-209ENST00000488426 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
NELFE-209ENST00000488426 PRR36Q9H6K5 1346 aa17.34■□□□□ 0.37
NELFE-209ENST00000488426 AFF2P51816 1311 aa17.33■□□□□ 0.37
NELFE-209ENST00000488426 RALBP1Q15311 655 aa17.33■□□□□ 0.37
NELFE-209ENST00000488426 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.37
NELFE-209ENST00000488426 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.36
NELFE-209ENST00000488426 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
NELFE-209ENST00000488426 ZNF772Q68DY9 489 aaPredicted RBP17.31■□□□□ 0.36
NELFE-209ENST00000488426 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
NELFE-209ENST00000488426 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
NELFE-209ENST00000488426 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms